RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 A0A0G2JLM5 398 aa14.68□□□□□ -0.06
BRAF-201ENST00000288602 J3KRW8 73 aa14.68□□□□□ -0.06
BRAF-201ENST00000288602 SRD5A1P18405 259 aa14.68□□□□□ -0.06
BRAF-201ENST00000288602 TWIST1Q15672 202 aa14.68□□□□□ -0.06
BRAF-201ENST00000288602 Q96MF0 132 aa14.68□□□□□ -0.06
BRAF-201ENST00000288602 MSRB1Q9NZV6 116 aa14.68□□□□□ -0.06
BRAF-201ENST00000288602 C11orf21Q9P2W6 132 aa14.68□□□□□ -0.06
BRAF-201ENST00000288602 RPLP1P05386 114 aaKnown RBP14.68□□□□□ -0.06
BRAF-201ENST00000288602 LINC00614P0C842 121 aa14.68□□□□□ -0.06
BRAF-201ENST00000288602 ATOH7Q8N100 152 aa14.68□□□□□ -0.06
BRAF-201ENST00000288602 ZNF738Q8NE65 137 aa14.68□□□□□ -0.06
BRAF-201ENST00000288602 TMEM208Q9BTX3 173 aa14.68□□□□□ -0.06
BRAF-201ENST00000288602 PRRC2AP48634 2157 aaKnown RBP14.67□□□□□ -0.06
BRAF-201ENST00000288602 DUX5Q96PT3 197 aa14.67□□□□□ -0.06
BRAF-201ENST00000288602 BEX4Q9NWD9 120 aaPredicted RBP14.67□□□□□ -0.06
BRAF-201ENST00000288602 TIMM8BQ9Y5J9 83 aaPredicted RBP14.67□□□□□ -0.06
BRAF-201ENST00000288602 IGHV1-24A0A0C4DH33 117 aa14.67□□□□□ -0.06
BRAF-201ENST00000288602 PSMB8P28062 276 aa14.67□□□□□ -0.06
BRAF-201ENST00000288602 RHPN1-AS1Q9BWJ2 59 aa14.67□□□□□ -0.06
BRAF-201ENST00000288602 DLEU1O43261 78 aa14.66□□□□□ -0.06
BRAF-201ENST00000288602 IGLC6P0CF74 106 aa14.66□□□□□ -0.06
BRAF-201ENST00000288602 LINC00173Q6ZV60 143 aa14.66□□□□□ -0.06
BRAF-201ENST00000288602 PSMG3-AS1Q96PY0 264 aa14.66□□□□□ -0.06
BRAF-201ENST00000288602 VAMP8Q9BV40 100 aa14.66□□□□□ -0.06
BRAF-201ENST00000288602 PEF1Q9UBV8 284 aaKnown RBP14.66□□□□□ -0.06
BRAF-201ENST00000288602 IGKV3D-20A0A0C4DH25 116 aa14.66□□□□□ -0.06
BRAF-201ENST00000288602 FOXE3Q13461 319 aa14.66□□□□□ -0.06
BRAF-201ENST00000288602 ZNF493Q6ZR52 646 aa14.66□□□□□ -0.06
BRAF-201ENST00000288602 GATD1Q8NB37 220 aa14.66□□□□□ -0.06
BRAF-201ENST00000288602 GOLT1BQ9Y3E0 138 aa14.66□□□□□ -0.06
BRAF-201ENST00000288602 A0A1B0GW15 77 aa14.65□□□□□ -0.06
BRAF-201ENST00000288602 D6R8Y8 96 aa14.65□□□□□ -0.06
BRAF-201ENST00000288602 NPSP0C0P6 89 aa14.65□□□□□ -0.06
BRAF-201ENST00000288602 F6UB75 175 aa14.65□□□□□ -0.06
BRAF-201ENST00000288602 HOXA3O43365 443 aaPredicted RBP14.65□□□□□ -0.06
BRAF-201ENST00000288602 C9orf47Q6ZRZ4 202 aa14.65□□□□□ -0.06
BRAF-201ENST00000288602 C9orf139Q6ZV77 190 aa14.65□□□□□ -0.06
BRAF-201ENST00000288602 C2orf70A6NJV1 201 aa14.64□□□□□ -0.07
BRAF-201ENST00000288602 CTRLP40313 264 aa14.64□□□□□ -0.07
BRAF-201ENST00000288602 RPS20P60866 119 aaKnown RBP14.64□□□□□ -0.07
BRAF-201ENST00000288602 BATFQ16520 125 aa14.64□□□□□ -0.07
BRAF-201ENST00000288602 PRR9Q5T870 116 aa14.64□□□□□ -0.07
BRAF-201ENST00000288602 SPATA12Q7Z6I5 190 aa14.64□□□□□ -0.07
BRAF-201ENST00000288602 MRPL53Q96EL3 112 aaKnown RBP14.64□□□□□ -0.07
BRAF-201ENST00000288602 MIEN1Q9BRT3 115 aa14.64□□□□□ -0.07
BRAF-201ENST00000288602 IGHV7-4-1A0A0J9YVY3 117 aa14.64□□□□□ -0.07
BRAF-201ENST00000288602 LOC389332A0A1B0GUA5 103 aa14.64□□□□□ -0.07
BRAF-201ENST00000288602 SMKR1H3BMG3 65 aa14.64□□□□□ -0.07
BRAF-201ENST00000288602 SOCS3O14543 225 aa14.64□□□□□ -0.07
BRAF-201ENST00000288602 MAJINQ3KP22 176 aa14.64□□□□□ -0.07
BRAF-201ENST00000288602 FAM104BQ5XKR9 115 aa14.64□□□□□ -0.07
BRAF-201ENST00000288602 VPREB3Q9UKI3 123 aa14.64□□□□□ -0.07
BRAF-201ENST00000288602 CUBNO60494 3623 aa14.63□□□□□ -0.07
BRAF-201ENST00000288602 LINC01559Q495D7 138 aa14.63□□□□□ -0.07
BRAF-201ENST00000288602 CHCHD1Q96BP2 118 aaKnown RBP14.63□□□□□ -0.07
BRAF-201ENST00000288602 C20orf144Q9BQM9 153 aa14.63□□□□□ -0.07
BRAF-201ENST00000288602 DAZ1Q9NQZ3 744 aaKnown RBP14.63□□□□□ -0.07
BRAF-201ENST00000288602 FSHBP01225 129 aa14.63□□□□□ -0.07
BRAF-201ENST00000288602 FAM106AQ4KMX7 169 aa14.63□□□□□ -0.07
BRAF-201ENST00000288602 MRPL51Q4U2R6 128 aaKnown RBP14.63□□□□□ -0.07
BRAF-201ENST00000288602 Q6YL49 198 aa14.63□□□□□ -0.07
BRAF-201ENST00000288602 CCDC168Q8NDH2 2452 aa14.62□□□□□ -0.07
BRAF-201ENST00000288602 ITPR3Q14573 2671 aa14.62□□□□□ -0.07
BRAF-201ENST00000288602 KRTAP1-3Q8IUG1 177 aa14.61□□□□□ -0.07
BRAF-201ENST00000288602 SONP18583 2426 aaKnown RBP14.61□□□□□ -0.07
BRAF-201ENST00000288602 NCR2O95944 276 aa14.61□□□□□ -0.07
BRAF-201ENST00000288602 IFI27P40305 119 aaPredicted RBP14.61□□□□□ -0.07
BRAF-201ENST00000288602 WFDC3Q8IUB2 231 aa14.6□□□□□ -0.07
BRAF-201ENST00000288602 PPP1R14DQ9NXH3 145 aa14.6□□□□□ -0.07
BRAF-201ENST00000288602 GAS8-AS1O95177 125 aa14.6□□□□□ -0.07
BRAF-201ENST00000288602 LEPROTL1O95214 131 aa14.6□□□□□ -0.07
BRAF-201ENST00000288602 SRSF2Q01130 221 aaKnown RBP14.6□□□□□ -0.07
BRAF-201ENST00000288602 MRPL52Q86TS9 123 aaKnown RBP14.6□□□□□ -0.07
BRAF-201ENST00000288602 PRSS3P2Q8NHM4 247 aa14.6□□□□□ -0.07
BRAF-201ENST00000288602 PRELID3AQ96N28 172 aa14.6□□□□□ -0.07
BRAF-201ENST00000288602 SMPXQ9UHP9 88 aa14.6□□□□□ -0.07
BRAF-201ENST00000288602 HIST1H1AQ02539 215 aaPredicted RBP14.59□□□□□ -0.07
BRAF-201ENST00000288602 SPATA45Q537H7 98 aa14.59□□□□□ -0.07
BRAF-201ENST00000288602 MCRIP2Q9BUT9 160 aaKnown RBP14.59□□□□□ -0.07
BRAF-201ENST00000288602 GAGE1Q13065 139 aa14.59□□□□□ -0.07
BRAF-201ENST00000288602 KIR3DS1Q14943 382 aa14.59□□□□□ -0.07
BRAF-201ENST00000288602 ZNF702PQ9H963 129 aa14.59□□□□□ -0.07
BRAF-201ENST00000288602 H0Y8G0 127 aa14.58□□□□□ -0.07
BRAF-201ENST00000288602 FXYD7P58549 80 aa14.58□□□□□ -0.07
BRAF-201ENST00000288602 ORMDL3Q8N138 153 aa14.58□□□□□ -0.07
BRAF-201ENST00000288602 LRRC75A-AS1Q8N1F1 130 aa14.58□□□□□ -0.07
BRAF-201ENST00000288602 OR10J6PQ8NGY7 276 aa14.58□□□□□ -0.07
BRAF-201ENST00000288602 SPRY2O43597 315 aa14.58□□□□□ -0.08
BRAF-201ENST00000288602 OR10AG1Q8NH19 301 aa14.58□□□□□ -0.08
BRAF-201ENST00000288602 AP5S1Q9NUS5 200 aa14.58□□□□□ -0.08
BRAF-201ENST00000288602 CKS2P33552 79 aa14.57□□□□□ -0.08
BRAF-201ENST00000288602 PRSS57Q6UWY2 283 aa14.57□□□□□ -0.08
BRAF-201ENST00000288602 TMEM70Q9BUB7 260 aa14.57□□□□□ -0.08
BRAF-201ENST00000288602 SIGLEC8Q9NYZ4 499 aa14.57□□□□□ -0.08
BRAF-201ENST00000288602 ZNF580Q9UK33 172 aa14.57□□□□□ -0.08
BRAF-201ENST00000288602 MYO9AB2RTY4 2548 aa14.57□□□□□ -0.08
BRAF-201ENST00000288602 TFPI2P48307 235 aa14.57□□□□□ -0.08
BRAF-201ENST00000288602 WFDC11Q8NEX6 87 aa14.57□□□□□ -0.08
BRAF-201ENST00000288602 WFDC12Q8WWY7 111 aa14.57□□□□□ -0.08
BRAF-201ENST00000288602 U3KQK5 164 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms