RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 TRAV10A0A0B4J240 114 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 A0A1B0GWJ7 208 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 HRKO00198 91 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 MIR17HGQ75NE6 70 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 TCF19Q9Y242 345 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 FRYQ5TBA9 3013 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 DENND4CQ5VZ89 1909 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 A6NDX4 124 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 D6R8Y8 96 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.53□□□□□ -1.84
NCOA1-201ENST00000288599 Q86TA4 180 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 FAM90A1Q86YD7 464 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 TMEM105Q8N8V8 129 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 LIMD2Q9BT23 127 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 DEFB131BA0A096LNP1 70 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 SNRNP200O75643 2136 aaKnown RBP3.53□□□□□ -1.84
NCOA1-201ENST00000288599 GFI1Q99684 422 aa3.53□□□□□ -1.84
NCOA1-201ENST00000288599 TRBV9A0A0B4J1U6 114 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 NDPQ00604 133 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 GUSBP1Q15486 140 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 HRCT1Q6UXD1 115 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 ZCCHC24Q8N2G6 241 aaKnown RBP3.52□□□□□ -1.85
NCOA1-201ENST00000288599 MYO16Q9Y6X6 1858 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 WDFY4Q6ZS81 3184 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 IGHV2OR16-5A0A0B4J2B6 119 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 TRBV10-2A0A0K0K1G8 114 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 C1QCP02747 245 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 IGHV4-38-2P0DP08 117 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 ZNF138P52744 262 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 SRSF3P84103 164 aaKnown RBP3.52□□□□□ -1.85
NCOA1-201ENST00000288599 RUSC1-AS1Q66K80 236 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 ZNF843Q8N446 348 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 LOC105371267A0A1B0GV96 52 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 CECR9P0C854 216 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 PRSS57Q6UWY2 283 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 ZNF318Q5VUA4 2279 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 IGKV1-12A0A0C4DH73 117 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 B5MCH6 92 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 C5orf67F2Z3F1 127 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 CXCL10P02778 98 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 C1orf134Q5TEV5 83 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 SPANXDQ9BXN6 97 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 SIGLEC9Q9Y336 463 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 U3KQK5 164 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 COL4A3Q01955 1670 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 IGLV3-16A0A075B6K0 115 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 GAGE12HA6NDE8 117 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 I3L3M4 83 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 SAA2P0DJI9 122 aaPredicted RBP3.52□□□□□ -1.85
NCOA1-201ENST00000288599 HERVK_113P63121 156 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 KIR3DS1Q14943 382 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 SPINK13Q1W4C9 94 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 LINC01559Q495D7 138 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 FAM104BQ5XKR9 115 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 DMKNQ6E0U4 476 aaPredicted RBP3.52□□□□□ -1.85
NCOA1-201ENST00000288599 ATRAIDQ6UW56 229 aa3.52□□□□□ -1.85
NCOA1-201ENST00000288599 MRPL27Q9P0M9 148 aaKnown RBP3.52□□□□□ -1.85
NCOA1-201ENST00000288599 TPRP12270 2363 aaKnown RBP3.52□□□□□ -1.85
NCOA1-201ENST00000288599 CCDC88CQ9P219 2028 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 SAA2-SAA4A0A096LPE2 208 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 SAA4P35542 130 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 DEFB135Q30KP9 77 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 FAM201AQ5SY85 155 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 NPBQ8NG41 125 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 DCANP1Q8TF63 244 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 ORMDL1Q9P0S3 153 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 IGHV4-61A0A0C4DH41 118 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 IZUMO1RA6ND01 250 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 SMKR1H3BMG3 65 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 TAX1BP3O14907 124 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 LOXP28300 417 aaPredicted RBP3.51□□□□□ -1.85
NCOA1-201ENST00000288599 TMEM190Q8WZ59 177 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 DIRC1Q969H9 104 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 LIME1Q9H400 295 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 CACNA1CQ13936 2221 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 TCF20Q9UGU0 1960 aaKnown RBP3.51□□□□□ -1.85
NCOA1-201ENST00000288599 IGKV1-9A0A0C4DH69 117 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 K7ENP7 123 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 SDIM1Q6ZPB5 146 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 C9orf40Q8IXQ3 194 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 SMIM20Q8N5G0 67 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 Q8N9L7 120 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 IGLV10-54A0A075B6I4 117 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 A0A0G2JMM0 328 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 A0A0G2JRQ6 117 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 A0A1W2PPB8 328 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 KIR3DP1A8MWS1 328 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 IGHV4-30-4P0DP06 118 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 IGHV4-31P0DP07 118 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 XGP55808 180 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 HELZP42694 1942 aaKnown RBP3.51□□□□□ -1.85
NCOA1-201ENST00000288599 NTN3O00634 580 aaPredicted RBP3.51□□□□□ -1.85
NCOA1-201ENST00000288599 HSD52Q0P140 79 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 BVES-AS1Q5T3Y7 98 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 FAM27BQ5VT28 67 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 AMTNQ6UX39 209 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 U3KQE9 123 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 FREM2Q5SZK8 3169 aa3.51□□□□□ -1.85
NCOA1-201ENST00000288599 COL4A2P08572 1712 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 IGKV2-40A0A087WW87 121 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms