RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 LDLRAD4O15165 306 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 PRB3Q04118 309 aaPredicted RBP3.26□□□□□ -1.89
SCN3A-201ENST00000283254 IL15RAQ13261 267 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 IGF2-ASQ6U949 168 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 SHISA3A0PJX4 238 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 IGKV1-16P04430 117 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 IFITM1P13164 125 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 Q6P435 159 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 ZNF833PQ6ZTB9 187 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 CRIPAKQ8N1N5 446 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 FNDC4Q9H6D8 234 aaPredicted RBP3.26□□□□□ -1.89
SCN3A-201ENST00000283254 LTBP1Q14766 1721 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 PFN2P35080 140 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 B3GALT5-AS1P59052 145 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 TMEM258P61165 79 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 SLC25A29Q8N8R3 303 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 WFDC12Q8WWY7 111 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 C16orf74Q96GX8 76 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 MRPL36Q9P0J6 103 aaKnown RBP3.26□□□□□ -1.89
SCN3A-201ENST00000283254 TECTAO75443 2155 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 RBAKDNA6NC62 111 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 C15orf62A8K5M9 175 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 LOXP28300 417 aaPredicted RBP3.26□□□□□ -1.89
SCN3A-201ENST00000283254 ZNF503Q96F45 646 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 RNF126Q9BV68 326 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 GBF1Q92538 1859 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 IGLV3-9A0A075B6K5 115 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 IGKV1D-8A0A087WSZ0 117 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 EFNA2O43921 213 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 TBX6O95947 436 aaPredicted RBP3.26□□□□□ -1.89
SCN3A-201ENST00000283254 IGHG4P01861 327 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 TRAV25A0A0B4J276 109 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 HAMPP81172 84 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 KIR3DS1Q14943 382 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 ZNRF2Q8NHG8 242 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 GSN-AS1Q9NRJ2 163 aa3.26□□□□□ -1.89
SCN3A-201ENST00000283254 NPC2P61916 151 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 AMN1Q8IY45 258 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 PRR25Q96S07 402 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 SLX1AQ9BQ83 275 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 PRSS47A8MTI9 375 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 J3QRE1 110 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 HLA-DRB4P13762 266 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 HERV-K104P63124 156 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 ANXA2RQ3ZCQ2 193 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 ZNF625Q96I27 306 aaPredicted RBP3.25□□□□□ -1.89
SCN3A-201ENST00000283254 PNRC2Q9NPJ4 139 aaKnown RBP3.25□□□□□ -1.89
SCN3A-201ENST00000283254 HLA-DRB4X5D2U9 266 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 RUSC1-AS1Q66K80 236 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 LAIR2Q6ISS4 152 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 CFHR4Q92496 578 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 CAMK2N2Q96S95 79 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 UBE2CO00762 179 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 NDUFA1O15239 70 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 GP9P14770 177 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 FXYD7P58549 80 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 GAGE6Q13070 117 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 IGF2BP2-AS1Q96M15 143 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 LCTP09848 1927 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 TMEM89A2RUT3 159 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 C9JQL5 133 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 H3BRN7 92 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 CHKB-CPT1BH3BT56 60 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 HLA-DMBP28068 263 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 PIFOQ8TCI5 191 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 KLK9Q9UKQ9 250 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 TRAV3A0A0B4J244 114 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 H0YGX0 51 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 NXPH4O95158 308 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 ZNF124Q15973 351 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 HIST3H2BBQ8N257 126 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 FGFBP3Q8TAT2 258 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 GREB1LQ9C091 1923 aaPredicted RBP3.25□□□□□ -1.89
SCN3A-201ENST00000283254 C9JAW5 83 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 F8VRH5 84 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 J3QQQ9 107 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 IGHV2-70P01814 119 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 C8orf49Q96NF6 230 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 SMAD5-AS1Q9Y6J3 95 aa3.25□□□□□ -1.89
SCN3A-201ENST00000283254 NDUFS5O43920 106 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 PDE6GP18545 87 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 Q0VG73 95 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 ORMDL1Q9P0S3 153 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 IGKV1OR2-108A0A075B7D4 117 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 KNCNA6PVL3 124 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 IGLL5B9A064 214 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 NDUFS6O75380 124 aaKnown RBP3.24□□□□□ -1.89
SCN3A-201ENST00000283254 IGHV2-5P01817 119 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 BTCP35070 178 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 FOXG1P55316 489 aaPredicted RBP3.24□□□□□ -1.89
SCN3A-201ENST00000283254 PLA2G2CQ5R387 149 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 A0A0A6YYD4 124 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 MPV17L2Q567V2 206 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 STAB1Q9NY15 2570 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 G3V318 75 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 LYPD2Q6UXB3 125 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 Q6ZVH6 145 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 WIPF2Q8TF74 440 aaPredicted RBP3.24□□□□□ -1.89
SCN3A-201ENST00000283254 CRYGCP07315 174 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 DEFB113Q30KQ7 82 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms