RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 EVI2AP22794 236 aa8.05□□□□□ -1.12
UPF3B-201ENST00000276201 DIAPH2-AS1Q14236 149 aa8.05□□□□□ -1.12
UPF3B-201ENST00000276201 LINC01356Q8N9X3 169 aa8.05□□□□□ -1.12
UPF3B-201ENST00000276201 RASL11BQ9BPW5 248 aa8.05□□□□□ -1.12
UPF3B-201ENST00000276201 TM2D2Q9BX73 214 aa8.05□□□□□ -1.12
UPF3B-201ENST00000276201 CNFNQ9BYD5 112 aa8.05□□□□□ -1.12
UPF3B-201ENST00000276201 TGFAP01135 160 aa8.04□□□□□ -1.12
UPF3B-201ENST00000276201 FAM106CPP0CH98 169 aa8.04□□□□□ -1.12
UPF3B-201ENST00000276201 FAM106AQ4KMX7 169 aa8.04□□□□□ -1.12
UPF3B-201ENST00000276201 PRR31Q5SQ13 230 aa8.04□□□□□ -1.12
UPF3B-201ENST00000276201 SAMD5Q5TGI4 173 aa8.04□□□□□ -1.12
UPF3B-201ENST00000276201 LYZL1Q6UWQ5 148 aa8.04□□□□□ -1.12
UPF3B-201ENST00000276201 LHFPL4Q7Z7J7 247 aa8.04□□□□□ -1.12
UPF3B-201ENST00000276201 LINC01619G3V211 115 aa8.04□□□□□ -1.12
UPF3B-201ENST00000276201 IGLC6P0CF74 106 aa8.04□□□□□ -1.12
UPF3B-201ENST00000276201 IGHV1-8P0DP01 117 aa8.04□□□□□ -1.12
UPF3B-201ENST00000276201 RIPPLY3P57055 190 aa8.04□□□□□ -1.12
UPF3B-201ENST00000276201 FOXI2Q6ZQN5 318 aa8.04□□□□□ -1.12
UPF3B-201ENST00000276201 PHLDA1Q8WV24 401 aaPredicted RBP8.04□□□□□ -1.12
UPF3B-201ENST00000276201 TMEM133Q9H2Q1 129 aa8.04□□□□□ -1.12
UPF3B-201ENST00000276201 B4DSR2 109 aa8.03□□□□□ -1.12
UPF3B-201ENST00000276201 H3BTX0 84 aa8.03□□□□□ -1.12
UPF3B-201ENST00000276201 ZNF207O43670 478 aaKnown RBP8.03□□□□□ -1.12
UPF3B-201ENST00000276201 RBP4P02753 201 aa8.03□□□□□ -1.12
UPF3B-201ENST00000276201 MSMBP08118 114 aa8.03□□□□□ -1.12
UPF3B-201ENST00000276201 FCER1GP30273 86 aa8.03□□□□□ -1.12
UPF3B-201ENST00000276201 PPP1R27Q86WC6 154 aa8.03□□□□□ -1.12
UPF3B-201ENST00000276201 PRSS47A8MTI9 375 aa8.03□□□□□ -1.12
UPF3B-201ENST00000276201 SNAI2O43623 268 aa8.03□□□□□ -1.12
UPF3B-201ENST00000276201 SH2D1AO60880 128 aa8.03□□□□□ -1.12
UPF3B-201ENST00000276201 NXT2Q9NPJ8 142 aaKnown RBP8.03□□□□□ -1.12
UPF3B-201ENST00000276201 CRLF1O75462 422 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 ATP5LO75964 103 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 IGLV1-47P01700 117 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 ZNF491Q8N8L2 437 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 VGLL1Q99990 258 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 TMEM160Q9NX00 188 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 HILPDAQ9Y5L2 63 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 E9PLD3 99 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 F8W1H4 67 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 K7EIM0 57 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 BMI1P35226 326 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 ODF1Q14990 250 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 SAMD13Q5VXD3 122 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 PCP2Q8IVA1 136 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 AMN1Q8IY45 258 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 MAP1LC3AQ9H492 121 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 AAMDCQ9H7C9 122 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 HIF1ANQ9NWT6 349 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 HHLA3Q9XRX5 114 aa8.02□□□□□ -1.13
UPF3B-201ENST00000276201 JMJD1CQ15652 2540 aa8.01□□□□□ -1.13
UPF3B-201ENST00000276201 TMEM213A2RRL7 107 aa8.01□□□□□ -1.13
UPF3B-201ENST00000276201 PPIAL4GP0DN37 164 aa8.01□□□□□ -1.13
UPF3B-201ENST00000276201 ZFP36P26651 326 aaKnown RBP8.01□□□□□ -1.13
UPF3B-201ENST00000276201 LYPD2Q6UXB3 125 aa8.01□□□□□ -1.13
UPF3B-201ENST00000276201 IL17RELQ6ZVW7 336 aa8.01□□□□□ -1.13
UPF3B-201ENST00000276201 RNF125Q96EQ8 232 aa8.01□□□□□ -1.13
UPF3B-201ENST00000276201 ARHGAP32A7KAX9 2087 aa8.01□□□□□ -1.13
UPF3B-201ENST00000276201 J3QR89 54 aa8□□□□□ -1.13
UPF3B-201ENST00000276201 ENSAO43768 121 aaKnown RBP8□□□□□ -1.13
UPF3B-201ENST00000276201 NPYP01303 97 aa8□□□□□ -1.13
UPF3B-201ENST00000276201 CKS2P33552 79 aa8□□□□□ -1.13
UPF3B-201ENST00000276201 CHAC1Q9BUX1 264 aa8□□□□□ -1.13
UPF3B-201ENST00000276201 ANK3Q12955 4377 aaKnown RBP8□□□□□ -1.13
UPF3B-201ENST00000276201 IGHV1-3A0A0C4DH29 117 aa8□□□□□ -1.13
UPF3B-201ENST00000276201 LOC389332A0A1B0GUA5 103 aa8□□□□□ -1.13
UPF3B-201ENST00000276201 TMEM11P17152 192 aa8□□□□□ -1.13
UPF3B-201ENST00000276201 ZNF562Q6V9R5 426 aa8□□□□□ -1.13
UPF3B-201ENST00000276201 BCL6BQ8N143 479 aaPredicted RBP8□□□□□ -1.13
UPF3B-201ENST00000276201 RNF185Q96GF1 192 aa8□□□□□ -1.13
UPF3B-201ENST00000276201 C8orf49Q96NF6 230 aa8□□□□□ -1.13
UPF3B-201ENST00000276201 SIGMAR1Q99720 223 aa8□□□□□ -1.13
UPF3B-201ENST00000276201 SPATA25Q9BR10 227 aa8□□□□□ -1.13
UPF3B-201ENST00000276201 CTSZQ9UBR2 303 aa8□□□□□ -1.13
UPF3B-201ENST00000276201 TIMM8BQ9Y5J9 83 aaPredicted RBP8□□□□□ -1.13
UPF3B-201ENST00000276201 PLXNB1O43157 2135 aa8□□□□□ -1.13
UPF3B-201ENST00000276201 CD300EQ496F6 205 aaPredicted RBP7.99□□□□□ -1.13
UPF3B-201ENST00000276201 CEND1Q8N111 149 aa7.99□□□□□ -1.13
UPF3B-201ENST00000276201 C17orf77Q96MU5 243 aa7.99□□□□□ -1.13
UPF3B-201ENST00000276201 PRR25Q96S07 402 aa7.99□□□□□ -1.13
UPF3B-201ENST00000276201 DKK2Q9UBU2 259 aa7.99□□□□□ -1.13
UPF3B-201ENST00000276201 BUB1B-PAK6H3BSN5 160 aa7.99□□□□□ -1.13
UPF3B-201ENST00000276201 IGKCP01834 107 aa7.99□□□□□ -1.13
UPF3B-201ENST00000276201 NMUP48645 174 aa7.99□□□□□ -1.13
UPF3B-201ENST00000276201 FXYD2P54710 66 aa7.99□□□□□ -1.13
UPF3B-201ENST00000276201 WNK2Q9Y3S1 2297 aa7.99□□□□□ -1.13
UPF3B-201ENST00000276201 A0A1B0GWB2 263 aa7.98□□□□□ -1.13
UPF3B-201ENST00000276201 LY6LH3BQJ8 138 aa7.98□□□□□ -1.13
UPF3B-201ENST00000276201 DPM2O94777 84 aa7.98□□□□□ -1.13
UPF3B-201ENST00000276201 CNTFRP26992 372 aa7.98□□□□□ -1.13
UPF3B-201ENST00000276201 S100A7P31151 101 aa7.98□□□□□ -1.13
UPF3B-201ENST00000276201 Q8N8P6 123 aa7.98□□□□□ -1.13
UPF3B-201ENST00000276201 ZNF502Q8TBZ5 544 aa7.98□□□□□ -1.13
UPF3B-201ENST00000276201 RAB37Q96AX2 223 aa7.98□□□□□ -1.13
UPF3B-201ENST00000276201 SPANXB1Q9NS25 103 aaPredicted RBP7.98□□□□□ -1.13
UPF3B-201ENST00000276201 IGHV3-21A0A0B4J1V1 117 aa7.98□□□□□ -1.13
UPF3B-201ENST00000276201 TEX48A0A1B0GUV7 120 aa7.98□□□□□ -1.13
UPF3B-201ENST00000276201 A0A1W2PRD5 423 aa7.98□□□□□ -1.13
UPF3B-201ENST00000276201 A0A1W2PRF3 423 aa7.98□□□□□ -1.13
UPF3B-201ENST00000276201 A0A1W2PRM7 423 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms