RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 ICOSQ9Y6W8 199 aa12.02□□□□□ -0.49
CSNK1D-201ENST00000269361 INMT-MINDY4F8WBC2 141 aa12.01□□□□□ -0.49
CSNK1D-201ENST00000269361 OR7C2O60412 319 aa12.01□□□□□ -0.49
CSNK1D-201ENST00000269361 LYPD1Q8N2G4 141 aa12.01□□□□□ -0.49
CSNK1D-201ENST00000269361 ATP5SQ99766 215 aa12.01□□□□□ -0.49
CSNK1D-201ENST00000269361 PRO0255Q9UI72 69 aa12.01□□□□□ -0.49
CSNK1D-201ENST00000269361 DNAH5Q8TE73 4624 aa12.01□□□□□ -0.49
CSNK1D-201ENST00000269361 APOBP04114 4563 aaKnown RBP12□□□□□ -0.49
CSNK1D-201ENST00000269361 RBAKDNA6NC62 111 aa12□□□□□ -0.49
CSNK1D-201ENST00000269361 SIVA1O15304 175 aa12□□□□□ -0.49
CSNK1D-201ENST00000269361 H2BFSP57053 126 aa12□□□□□ -0.49
CSNK1D-201ENST00000269361 KRTAP10-2P60368 255 aa12□□□□□ -0.49
CSNK1D-201ENST00000269361 IFITM3Q01628 133 aa12□□□□□ -0.49
CSNK1D-201ENST00000269361 SLAQ13239 276 aa12□□□□□ -0.49
CSNK1D-201ENST00000269361 ZNF266Q14584 549 aa12□□□□□ -0.49
CSNK1D-201ENST00000269361 PPP1R1CQ8WVI7 109 aa12□□□□□ -0.49
CSNK1D-201ENST00000269361 HHLA3Q9XRX5 114 aa12□□□□□ -0.49
CSNK1D-201ENST00000269361 NXPH4O95158 308 aa11.99□□□□□ -0.49
CSNK1D-201ENST00000269361 CRYBA4P53673 196 aa11.99□□□□□ -0.49
CSNK1D-201ENST00000269361 LINC00315P59091 139 aa11.99□□□□□ -0.49
CSNK1D-201ENST00000269361 UBE2L3P68036 154 aaKnown RBP11.99□□□□□ -0.49
CSNK1D-201ENST00000269361 ZNF415Q09FC8 603 aa11.99□□□□□ -0.49
CSNK1D-201ENST00000269361 FHL2Q14192 279 aa11.99□□□□□ -0.49
CSNK1D-201ENST00000269361 FFAR4Q5NUL3 377 aa11.99□□□□□ -0.49
CSNK1D-201ENST00000269361 MUC21Q5SSG8 566 aa11.99□□□□□ -0.49
CSNK1D-201ENST00000269361 C8orf49Q96NF6 230 aa11.99□□□□□ -0.49
CSNK1D-201ENST00000269361 MDFICQ9P1T7 246 aa11.98□□□□□ -0.49
CSNK1D-201ENST00000269361 HSPB11Q9Y547 144 aa11.98□□□□□ -0.49
CSNK1D-201ENST00000269361 MRPL23Q16540 153 aaKnown RBP11.97□□□□□ -0.49
CSNK1D-201ENST00000269361 LYPD5Q6UWN5 251 aa11.97□□□□□ -0.49
CSNK1D-201ENST00000269361 Q6ZRN7 208 aaPredicted RBP11.97□□□□□ -0.49
CSNK1D-201ENST00000269361 SCGB1C1Q8TD33 95 aa11.97□□□□□ -0.49
CSNK1D-201ENST00000269361 MARVELD1Q9BSK0 173 aa11.97□□□□□ -0.49
CSNK1D-201ENST00000269361 DIRC3C9JPN6 131 aa11.96□□□□□ -0.49
CSNK1D-201ENST00000269361 MPC2O95563 127 aa11.96□□□□□ -0.49
CSNK1D-201ENST00000269361 IFNA5P01569 189 aa11.96□□□□□ -0.49
CSNK1D-201ENST00000269361 TAS2R45P59539 299 aa11.96□□□□□ -0.49
CSNK1D-201ENST00000269361 KHDC3LQ587J8 217 aa11.96□□□□□ -0.49
CSNK1D-201ENST00000269361 Q6AWC8 147 aa11.96□□□□□ -0.49
CSNK1D-201ENST00000269361 SMIM3Q9BZL3 60 aa11.96□□□□□ -0.49
CSNK1D-201ENST00000269361 LENEPQ9Y5L5 61 aa11.96□□□□□ -0.49
CSNK1D-201ENST00000269361 TRGV4A0A0C4DH28 118 aa11.95□□□□□ -0.5
CSNK1D-201ENST00000269361 SSNA1O43805 119 aa11.95□□□□□ -0.5
CSNK1D-201ENST00000269361 PET100P0DJ07 73 aa11.95□□□□□ -0.5
CSNK1D-201ENST00000269361 RPL12P30050 165 aaKnown RBP11.95□□□□□ -0.5
CSNK1D-201ENST00000269361 FAM159AQ6UWV7 190 aa11.95□□□□□ -0.5
CSNK1D-201ENST00000269361 NEGR1Q7Z3B1 354 aa11.95□□□□□ -0.5
CSNK1D-201ENST00000269361 IQCF2Q8IXL9 164 aa11.95□□□□□ -0.5
CSNK1D-201ENST00000269361 Q8N1X5 172 aa11.95□□□□□ -0.5
CSNK1D-201ENST00000269361 RASL10AQ92737 203 aa11.95□□□□□ -0.5
CSNK1D-201ENST00000269361 HYLS1Q96M11 299 aa11.95□□□□□ -0.5
CSNK1D-201ENST00000269361 EIF3GO75821 320 aaKnown RBP eCLIP11.94□□□□□ -0.5
CSNK1D-201ENST00000269361 TMEM183BQ1AE95 376 aa11.94□□□□□ -0.5
CSNK1D-201ENST00000269361 TMEM183AQ8IXX5 376 aa11.94□□□□□ -0.5
CSNK1D-201ENST00000269361 TMED6Q8WW62 240 aa11.94□□□□□ -0.5
CSNK1D-201ENST00000269361 ZNF479Q96JC4 524 aa11.94□□□□□ -0.5
CSNK1D-201ENST00000269361 SPXQ9BT56 116 aa11.94□□□□□ -0.5
CSNK1D-201ENST00000269361 OTORQ9NRC9 128 aa11.94□□□□□ -0.5
CSNK1D-201ENST00000269361 TRGV11A0A075B6L2 103 aa11.93□□□□□ -0.5
CSNK1D-201ENST00000269361 PGPA6NDG6 321 aa11.93□□□□□ -0.5
CSNK1D-201ENST00000269361 SFTA3P0C7M3 94 aa11.93□□□□□ -0.5
CSNK1D-201ENST00000269361 OR10G4Q8NGN3 311 aa11.93□□□□□ -0.5
CSNK1D-201ENST00000269361 CMTM2Q8TAZ6 248 aa11.93□□□□□ -0.5
CSNK1D-201ENST00000269361 MBD2Q9UBB5 411 aa11.93□□□□□ -0.5
CSNK1D-201ENST00000269361 TNFRSF18Q9Y5U5 241 aa11.93□□□□□ -0.5
CSNK1D-201ENST00000269361 A6NHS1 94 aa11.92□□□□□ -0.5
CSNK1D-201ENST00000269361 K7EQD1 137 aa11.92□□□□□ -0.5
CSNK1D-201ENST00000269361 TDRG1Q3Y452 100 aa11.92□□□□□ -0.5
CSNK1D-201ENST00000269361 WFDC1Q9HC57 220 aa11.92□□□□□ -0.5
CSNK1D-201ENST00000269361 SCRT2Q9NQ03 307 aa11.92□□□□□ -0.5
CSNK1D-201ENST00000269361 PGPEP1Q9NXJ5 209 aa11.92□□□□□ -0.5
CSNK1D-201ENST00000269361 PTTG2Q9NZH5 202 aa11.92□□□□□ -0.5
CSNK1D-201ENST00000269361 TRAV9-2A0A087WT02 112 aa11.91□□□□□ -0.5
CSNK1D-201ENST00000269361 SRIP30626 198 aa11.91□□□□□ -0.5
CSNK1D-201ENST00000269361 DEFA1P59665 94 aa11.91□□□□□ -0.5
CSNK1D-201ENST00000269361 DEFA3P59666 94 aa11.91□□□□□ -0.5
CSNK1D-201ENST00000269361 ACOT6Q3I5F7 207 aaPredicted RBP11.91□□□□□ -0.5
CSNK1D-201ENST00000269361 FAM74A1Q5RGS3 127 aa11.91□□□□□ -0.5
CSNK1D-201ENST00000269361 NFE4Q86UQ8 179 aa11.91□□□□□ -0.5
CSNK1D-201ENST00000269361 PCNPQ8WW12 178 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-201ENST00000269361 NAGKQ9UJ70 344 aa11.91□□□□□ -0.5
CSNK1D-201ENST00000269361 RPH3ALQ9UNE2 315 aa11.91□□□□□ -0.5
CSNK1D-201ENST00000269361 A0A1W2PPV4 95 aa11.9□□□□□ -0.5
CSNK1D-201ENST00000269361 EREGO14944 169 aa11.9□□□□□ -0.5
CSNK1D-201ENST00000269361 GNRH2O43555 120 aa11.9□□□□□ -0.5
CSNK1D-201ENST00000269361 ORM1P02763 201 aa11.9□□□□□ -0.5
CSNK1D-201ENST00000269361 GYPEP15421 78 aa11.9□□□□□ -0.5
CSNK1D-201ENST00000269361 ERVFC1-1P60608 527 aa11.9□□□□□ -0.5
CSNK1D-201ENST00000269361 PQLC2Q6ZP29 291 aa11.9□□□□□ -0.5
CSNK1D-201ENST00000269361 ARL6IP6Q8N6S5 226 aa11.9□□□□□ -0.5
CSNK1D-201ENST00000269361 LY96Q9Y6Y9 160 aa11.9□□□□□ -0.5
CSNK1D-201ENST00000269361 IGHV3-16A0A0C4DH30 117 aa11.89□□□□□ -0.51
CSNK1D-201ENST00000269361 GOLT1AQ6ZVE7 132 aa11.89□□□□□ -0.51
CSNK1D-201ENST00000269361 TRAV4A0A0B4J268 109 aa11.88□□□□□ -0.51
CSNK1D-201ENST00000269361 TRAV21A0A0B4J279 112 aa11.88□□□□□ -0.51
CSNK1D-201ENST00000269361 K7EP13 123 aa11.88□□□□□ -0.51
CSNK1D-201ENST00000269361 M0R2P5 195 aa11.88□□□□□ -0.51
CSNK1D-201ENST00000269361 FUSP35637 526 aaKnown RBP eCLIP11.88□□□□□ -0.51
CSNK1D-201ENST00000269361 RAB2AP61019 212 aa11.88□□□□□ -0.51
CSNK1D-201ENST00000269361 WFDC10BQ8IUB3 73 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms