RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 PRR9Q5T870 116 aa17.56■□□□□ 0.4
RAB40B-201ENST00000269347 RHPN1-AS1Q9BWJ2 59 aa17.55■□□□□ 0.4
RAB40B-201ENST00000269347 IGHV7-4-1A0A0J9YVY3 117 aa17.55■□□□□ 0.4
RAB40B-201ENST00000269347 RBAKDNA6NC62 111 aa17.55■□□□□ 0.4
RAB40B-201ENST00000269347 HSBP1O75506 76 aa17.55■□□□□ 0.4
RAB40B-201ENST00000269347 PRSS57Q6UWY2 283 aa17.55■□□□□ 0.4
RAB40B-201ENST00000269347 PAM16Q9Y3D7 125 aa17.55■□□□□ 0.4
RAB40B-201ENST00000269347 LOC102724200A0A096LPH7 203 aaPredicted RBP17.54■□□□□ 0.4
RAB40B-201ENST00000269347 A0A1B0GV90 55 aa17.54■□□□□ 0.4
RAB40B-201ENST00000269347 FAM181BA6NEQ2 426 aa17.54■□□□□ 0.4
RAB40B-201ENST00000269347 C18orf65Q6ZTR6 163 aa17.54■□□□□ 0.4
RAB40B-201ENST00000269347 Q8N976 141 aa17.54■□□□□ 0.4
RAB40B-201ENST00000269347 BORCS7Q96B45 105 aa17.54■□□□□ 0.4
RAB40B-201ENST00000269347 C20orf144Q9BQM9 153 aa17.54■□□□□ 0.4
RAB40B-201ENST00000269347 C2orf88Q9BSF0 95 aa17.54■□□□□ 0.4
RAB40B-201ENST00000269347 F6UB75 175 aa17.53■□□□□ 0.4
RAB40B-201ENST00000269347 J3QKU1 62 aa17.53■□□□□ 0.4
RAB40B-201ENST00000269347 RNASEKQ6P5S7 137 aaKnown RBP17.53■□□□□ 0.4
RAB40B-201ENST00000269347 IGKV3D-20A0A0C4DH25 116 aa17.52■□□□□ 0.4
RAB40B-201ENST00000269347 C3orf79P0CE67 100 aa17.52■□□□□ 0.4
RAB40B-201ENST00000269347 FOXE3Q13461 319 aa17.52■□□□□ 0.4
RAB40B-201ENST00000269347 IGLC6P0CF74 106 aa17.52■□□□□ 0.39
RAB40B-201ENST00000269347 ZNF138P52744 262 aa17.52■□□□□ 0.39
RAB40B-201ENST00000269347 C9orf47Q6ZRZ4 202 aa17.52■□□□□ 0.39
RAB40B-201ENST00000269347 MSRB1Q9NZV6 116 aa17.52■□□□□ 0.39
RAB40B-201ENST00000269347 LINC00469Q8N7U9 141 aa17.51■□□□□ 0.39
RAB40B-201ENST00000269347 MRPL53Q96EL3 112 aaKnown RBP17.51■□□□□ 0.39
RAB40B-201ENST00000269347 DAZ1Q9NQZ3 744 aaKnown RBP17.51■□□□□ 0.39
RAB40B-201ENST00000269347 SMPXQ9UHP9 88 aa17.51■□□□□ 0.39
RAB40B-201ENST00000269347 EREGO14944 169 aa17.5■□□□□ 0.39
RAB40B-201ENST00000269347 ORM1P02763 201 aa17.5■□□□□ 0.39
RAB40B-201ENST00000269347 RPL11P62913 178 aaKnown RBP17.5■□□□□ 0.39
RAB40B-201ENST00000269347 PMCHL1Q16048 86 aa17.5■□□□□ 0.39
RAB40B-201ENST00000269347 FBLL1A6NHQ2 334 aaKnown RBP17.5■□□□□ 0.39
RAB40B-201ENST00000269347 M0R2Z0 102 aa17.5■□□□□ 0.39
RAB40B-201ENST00000269347 KIR3DS1Q14943 382 aa17.5■□□□□ 0.39
RAB40B-201ENST00000269347 GATD1Q8NB37 220 aa17.5■□□□□ 0.39
RAB40B-201ENST00000269347 ZNF738Q8NE65 137 aa17.5■□□□□ 0.39
RAB40B-201ENST00000269347 MYOZ3Q8TDC0 251 aa17.5■□□□□ 0.39
RAB40B-201ENST00000269347 SORL1Q92673 2214 aa17.5■□□□□ 0.39
RAB40B-201ENST00000269347 KRTAP1-1Q07627 177 aa17.49■□□□□ 0.39
RAB40B-201ENST00000269347 ZNF705AQ6ZN79 300 aaPredicted RBP17.49■□□□□ 0.39
RAB40B-201ENST00000269347 FABP5P3A8MUU1 101 aa17.49■□□□□ 0.39
RAB40B-201ENST00000269347 J3KRW8 73 aa17.49■□□□□ 0.39
RAB40B-201ENST00000269347 MIEN1Q9BRT3 115 aa17.49■□□□□ 0.39
RAB40B-201ENST00000269347 FASNP49327 2511 aaKnown RBP17.49■□□□□ 0.39
RAB40B-201ENST00000269347 IGHV4OR15-8A0A075B7B6 117 aa17.48■□□□□ 0.39
RAB40B-201ENST00000269347 A0A087WW49 117 aa17.48■□□□□ 0.39
RAB40B-201ENST00000269347 RIGQ13278 110 aa17.48■□□□□ 0.39
RAB40B-201ENST00000269347 BMI1P35226 326 aa17.47■□□□□ 0.39
RAB40B-201ENST00000269347 TMEM78Q5T7P6 136 aa17.47■□□□□ 0.39
RAB40B-201ENST00000269347 NDFIP1Q9BT67 221 aa17.47■□□□□ 0.39
RAB40B-201ENST00000269347 SNHG12Q9BXW3 62 aa17.47■□□□□ 0.39
RAB40B-201ENST00000269347 CTRLP40313 264 aa17.47■□□□□ 0.39
RAB40B-201ENST00000269347 AMN1Q8IY45 258 aa17.47■□□□□ 0.39
RAB40B-201ENST00000269347 HECTD1Q9ULT8 2610 aa17.47■□□□□ 0.39
RAB40B-201ENST00000269347 MTORP42345 2549 aa17.47■□□□□ 0.39
RAB40B-201ENST00000269347 M0R143 59 aa17.46■□□□□ 0.39
RAB40B-201ENST00000269347 LINC01559Q495D7 138 aa17.46■□□□□ 0.39
RAB40B-201ENST00000269347 FER1L6-AS1Q8NA97 138 aa17.46■□□□□ 0.39
RAB40B-201ENST00000269347 AGRNO00468 2067 aa17.46■□□□□ 0.39
RAB40B-201ENST00000269347 DEFB136Q30KP8 78 aa17.46■□□□□ 0.39
RAB40B-201ENST00000269347 ZNF493Q6ZR52 646 aa17.46■□□□□ 0.39
RAB40B-201ENST00000269347 Q6AWC8 147 aa17.45■□□□□ 0.38
RAB40B-201ENST00000269347 ZFAND2AQ8N6M9 145 aa17.45■□□□□ 0.38
RAB40B-201ENST00000269347 DCANP1Q8TF63 244 aa17.45■□□□□ 0.38
RAB40B-201ENST00000269347 TMEM89A2RUT3 159 aa17.44■□□□□ 0.38
RAB40B-201ENST00000269347 K7EMT4 169 aa17.44■□□□□ 0.38
RAB40B-201ENST00000269347 GAS8-AS1O95177 125 aa17.44■□□□□ 0.38
RAB40B-201ENST00000269347 RAB4AP20338 218 aa17.44■□□□□ 0.38
RAB40B-201ENST00000269347 SYNJ2BPP57105 145 aa17.44■□□□□ 0.38
RAB40B-201ENST00000269347 FAM106AQ4KMX7 169 aa17.44■□□□□ 0.38
RAB40B-201ENST00000269347 TCTEX1D4Q5JR98 221 aa17.44■□□□□ 0.38
RAB40B-201ENST00000269347 WFDC3Q8IUB2 231 aa17.44■□□□□ 0.38
RAB40B-201ENST00000269347 SPRY2O43597 315 aa17.43■□□□□ 0.38
RAB40B-201ENST00000269347 CSN3P07498 182 aa17.43■□□□□ 0.38
RAB40B-201ENST00000269347 SPATA45Q537H7 98 aa17.43■□□□□ 0.38
RAB40B-201ENST00000269347 LINC00173Q6ZV60 143 aa17.43■□□□□ 0.38
RAB40B-201ENST00000269347 LGALS1P09382 135 aaKnown RBP17.43■□□□□ 0.38
RAB40B-201ENST00000269347 SRSF2Q01130 221 aaKnown RBP17.43■□□□□ 0.38
RAB40B-201ENST00000269347 EBLN2Q6P2I7 272 aa17.43■□□□□ 0.38
RAB40B-201ENST00000269347 SPATA12Q7Z6I5 190 aa17.43■□□□□ 0.38
RAB40B-201ENST00000269347 Q8N2B8 174 aa17.43■□□□□ 0.38
RAB40B-201ENST00000269347 CHCHD1Q96BP2 118 aaKnown RBP17.43■□□□□ 0.38
RAB40B-201ENST00000269347 SMKR1H3BMG3 65 aa17.42■□□□□ 0.38
RAB40B-201ENST00000269347 PPP1R14DQ9NXH3 145 aa17.42■□□□□ 0.38
RAB40B-201ENST00000269347 CLEC5AQ9NY25 188 aa17.42■□□□□ 0.38
RAB40B-201ENST00000269347 BTF3P20290 206 aaKnown RBP17.42■□□□□ 0.38
RAB40B-201ENST00000269347 ADAMTSL5Q6ZMM2 481 aa17.42■□□□□ 0.38
RAB40B-201ENST00000269347 ESM1Q9NQ30 184 aa17.42■□□□□ 0.38
RAB40B-201ENST00000269347 SETD2Q9BYW2 2564 aaPredicted RBP17.41■□□□□ 0.38
RAB40B-201ENST00000269347 A0A1B0GW15 77 aa17.41■□□□□ 0.38
RAB40B-201ENST00000269347 ELANEP08246 267 aa17.41■□□□□ 0.38
RAB40B-201ENST00000269347 HIST1H1AQ02539 215 aaPredicted RBP17.41■□□□□ 0.38
RAB40B-201ENST00000269347 TWIST1Q15672 202 aa17.41■□□□□ 0.38
RAB40B-201ENST00000269347 FAM104BQ5XKR9 115 aa17.41■□□□□ 0.38
RAB40B-201ENST00000269347 RNF152Q8N8N0 203 aa17.41■□□□□ 0.38
RAB40B-201ENST00000269347 WFDC12Q8WWY7 111 aa17.41■□□□□ 0.38
RAB40B-201ENST00000269347 DUX3Q96PT4 197 aa17.41■□□□□ 0.38
RAB40B-201ENST00000269347 D6R8Y8 96 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms