RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 TMEM75Q8N9X5 138 aa9.15□□□□□ -0.94
SS18-202ENST00000269138 MUC7Q8TAX7 377 aa9.15□□□□□ -0.94
SS18-202ENST00000269138 HIST1H2BAQ96A08 127 aa9.15□□□□□ -0.94
SS18-202ENST00000269138 NIPSNAP3BQ9BS92 247 aa9.15□□□□□ -0.94
SS18-202ENST00000269138 MANBALQ9NQG1 85 aa9.15□□□□□ -0.94
SS18-202ENST00000269138 CELA1Q9UNI1 258 aa9.15□□□□□ -0.94
SS18-202ENST00000269138 SCO2A0A1W2PP80 73 aa9.15□□□□□ -0.95
SS18-202ENST00000269138 C11orf94C9JXX5 98 aa9.15□□□□□ -0.95
SS18-202ENST00000269138 NANOS2P60321 138 aaKnown RBP9.15□□□□□ -0.95
SS18-202ENST00000269138 ZFAND6Q6FIF0 208 aa9.15□□□□□ -0.95
SS18-202ENST00000269138 PLAC8L1A1L4L8 177 aa9.14□□□□□ -0.95
SS18-202ENST00000269138 ZNF80P51504 273 aaPredicted RBP9.14□□□□□ -0.95
SS18-202ENST00000269138 TEX261Q6UWH6 196 aa9.14□□□□□ -0.95
SS18-202ENST00000269138 ZNF767PQ75MW2 155 aa9.14□□□□□ -0.95
SS18-202ENST00000269138 C11orf45Q8TAV5 145 aa9.14□□□□□ -0.95
SS18-202ENST00000269138 PCNPQ8WW12 178 aaKnown RBP9.14□□□□□ -0.95
SS18-202ENST00000269138 KLF12Q9Y4X4 402 aa9.14□□□□□ -0.95
SS18-202ENST00000269138 DNAH7Q8WXX0 4024 aa9.13□□□□□ -0.95
SS18-202ENST00000269138 AKR1C3P42330 323 aa9.13□□□□□ -0.95
SS18-202ENST00000269138 PMS2P11Q13670 270 aa9.13□□□□□ -0.95
SS18-202ENST00000269138 MUC21Q5SSG8 566 aa9.13□□□□□ -0.95
SS18-202ENST00000269138 Q6AWC8 147 aa9.13□□□□□ -0.95
SS18-202ENST00000269138 Q86TA4 180 aa9.13□□□□□ -0.95
SS18-202ENST00000269138 ZNF680Q8NEM1 530 aa9.13□□□□□ -0.95
SS18-202ENST00000269138 LYPD6BQ8NI32 183 aa9.13□□□□□ -0.95
SS18-202ENST00000269138 C2CD4CQ8TF44 421 aa9.13□□□□□ -0.95
SS18-202ENST00000269138 PYGO2Q9BRQ0 406 aa9.13□□□□□ -0.95
SS18-202ENST00000269138 TCEAL7Q9BRU2 100 aa9.13□□□□□ -0.95
SS18-202ENST00000269138 NDFIP1Q9BT67 221 aa9.13□□□□□ -0.95
SS18-202ENST00000269138 TP53TG3Q9ULZ0 132 aa9.13□□□□□ -0.95
SS18-202ENST00000269138 TMEM189A5PLL7 270 aa9.12□□□□□ -0.95
SS18-202ENST00000269138 CXorf65A6NEN9 183 aa9.12□□□□□ -0.95
SS18-202ENST00000269138 FBLL1A6NHQ2 334 aaKnown RBP9.12□□□□□ -0.95
SS18-202ENST00000269138 BCL2P10415 239 aa9.12□□□□□ -0.95
SS18-202ENST00000269138 FAM222AQ5U5X8 452 aa9.12□□□□□ -0.95
SS18-202ENST00000269138 RNASE8Q8TDE3 154 aaKnown RBP9.12□□□□□ -0.95
SS18-202ENST00000269138 DKK2Q9UBU2 259 aa9.12□□□□□ -0.95
SS18-202ENST00000269138 IGHV1OR15-1A0A075B7D0 117 aa9.11□□□□□ -0.95
SS18-202ENST00000269138 RGS13O14921 159 aa9.11□□□□□ -0.95
SS18-202ENST00000269138 GCGP01275 180 aa9.11□□□□□ -0.95
SS18-202ENST00000269138 IFNA1P01562 189 aa9.11□□□□□ -0.95
SS18-202ENST00000269138 TMEM183BQ1AE95 376 aa9.11□□□□□ -0.95
SS18-202ENST00000269138 C12orf74Q32Q52 190 aa9.11□□□□□ -0.95
SS18-202ENST00000269138 SAPCD1Q5SSQ6 148 aa9.11□□□□□ -0.95
SS18-202ENST00000269138 EIF4E3Q8N5X7 224 aaKnown RBP9.11□□□□□ -0.95
SS18-202ENST00000269138 FMC1Q96HJ9 113 aa9.11□□□□□ -0.95
SS18-202ENST00000269138 LINC00467Q9BRT7 94 aa9.11□□□□□ -0.95
SS18-202ENST00000269138 TRBV6-1A0A0K0K1D8 114 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 CBY3A6NI87 242 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 SPART-AS1P0CW21 52 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 UBE2G1P62253 170 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 MEF2BQ02080 365 aaPredicted RBP9.1□□□□□ -0.95
SS18-202ENST00000269138 SMUG1Q53HV7 270 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 ZNF493Q6ZR52 646 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 TMEM263Q8WUH6 116 aaKnown RBP9.1□□□□□ -0.95
SS18-202ENST00000269138 C16orf74Q96GX8 76 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 DERL1Q9BUN8 251 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 C11orf21Q9P2W6 132 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 VAX2Q9UIW0 290 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 NAGKQ9UJ70 344 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 TRAV21A0A0B4J279 112 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 C3orf84H3BNL1 204 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 LTAP01374 205 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 ANXA2RQ3ZCQ2 193 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 Q6ZTC4 211 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 NHLRC2Q8NBF2 726 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 C11orf52Q96A22 123 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 ZC2HC1AQ96GY0 325 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 TXNDC17Q9BRA2 123 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 NOP10Q9NPE3 64 aaKnown RBP9.1□□□□□ -0.95
SS18-202ENST00000269138 GSN-AS1Q9NRJ2 163 aa9.1□□□□□ -0.95
SS18-202ENST00000269138 RBFOX3A6NFN3 312 aa9.09□□□□□ -0.95
SS18-202ENST00000269138 GNRH2O43555 120 aa9.09□□□□□ -0.95
SS18-202ENST00000269138 RPL35P42766 123 aaKnown RBP9.09□□□□□ -0.95
SS18-202ENST00000269138 CRIP1P50238 77 aa9.09□□□□□ -0.95
SS18-202ENST00000269138 CASC10Q5T4H9 136 aa9.09□□□□□ -0.95
SS18-202ENST00000269138 C11orf72Q8NBR9 251 aa9.09□□□□□ -0.95
SS18-202ENST00000269138 ZFP30Q9Y2G7 519 aa9.09□□□□□ -0.95
SS18-202ENST00000269138 TIMM8BQ9Y5J9 83 aaPredicted RBP9.09□□□□□ -0.95
SS18-202ENST00000269138 S100A9P06702 114 aaKnown RBP9.08□□□□□ -0.96
SS18-202ENST00000269138 PFN1P07737 140 aaKnown RBP9.08□□□□□ -0.96
SS18-202ENST00000269138 FAM159AQ6UWV7 190 aa9.08□□□□□ -0.96
SS18-202ENST00000269138 TMEM183AQ8IXX5 376 aa9.08□□□□□ -0.96
SS18-202ENST00000269138 PHLDA1Q8WV24 401 aaPredicted RBP9.08□□□□□ -0.96
SS18-202ENST00000269138 MDFICQ9P1T7 246 aa9.08□□□□□ -0.96
SS18-202ENST00000269138 RAB19A4D1S5 217 aa9.07□□□□□ -0.96
SS18-202ENST00000269138 LYRM9A8MSI8 78 aa9.07□□□□□ -0.96
SS18-202ENST00000269138 PDE6DO43924 150 aa9.07□□□□□ -0.96
SS18-202ENST00000269138 DEFB130BP0DP73 79 aa9.07□□□□□ -0.96
SS18-202ENST00000269138 DEFB130AP0DP74 79 aa9.07□□□□□ -0.96
SS18-202ENST00000269138 TAGLN2P37802 199 aaKnown RBP9.07□□□□□ -0.96
SS18-202ENST00000269138 TDRG1Q3Y452 100 aa9.07□□□□□ -0.96
SS18-202ENST00000269138 ZNF506Q5JVG8 444 aa9.07□□□□□ -0.96
SS18-202ENST00000269138 COX8CQ7Z4L0 72 aa9.07□□□□□ -0.96
SS18-202ENST00000269138 BAGE2Q86Y30 109 aa9.07□□□□□ -0.96
SS18-202ENST00000269138 MED9Q9NWA0 146 aa9.07□□□□□ -0.96
SS18-202ENST00000269138 SNURFLB1AK76 121 aa9.06□□□□□ -0.96
SS18-202ENST00000269138 DAD1P61803 113 aa9.06□□□□□ -0.96
SS18-202ENST00000269138 TOR2AQ5JU69 321 aa9.06□□□□□ -0.96
SS18-202ENST00000269138 CEMP1Q6PRD7 247 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms