RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 PIFOQ8TCI5 191 aa9.92□□□□□ -0.82
CPSF6-201ENST00000266679 PRELID3AQ96N28 172 aa9.92□□□□□ -0.82
CPSF6-201ENST00000266679 SMKR1H3BMG3 65 aa9.91□□□□□ -0.82
CPSF6-201ENST00000266679 IGLC6P0CF74 106 aa9.91□□□□□ -0.82
CPSF6-201ENST00000266679 TSPOP30536 169 aa9.91□□□□□ -0.82
CPSF6-201ENST00000266679 FAM106AQ4KMX7 169 aa9.91□□□□□ -0.82
CPSF6-201ENST00000266679 C10orf105Q8TEF2 133 aa9.91□□□□□ -0.82
CPSF6-201ENST00000266679 TMEM191AQ9H0A3 160 aa9.91□□□□□ -0.82
CPSF6-201ENST00000266679 TP73-AS1Q9UF72 201 aa9.91□□□□□ -0.82
CPSF6-201ENST00000266679 TLN2Q9Y4G6 2542 aa9.91□□□□□ -0.82
CPSF6-201ENST00000266679 TRAV8-2A0A0B4J237 113 aa9.91□□□□□ -0.82
CPSF6-201ENST00000266679 LOXL1Q08397 574 aaPredicted RBP9.91□□□□□ -0.82
CPSF6-201ENST00000266679 C19orf54Q5BKX5 351 aa9.91□□□□□ -0.82
CPSF6-201ENST00000266679 ORMDL3Q8N138 153 aa9.91□□□□□ -0.82
CPSF6-201ENST00000266679 SIGLEC8Q9NYZ4 499 aa9.91□□□□□ -0.82
CPSF6-201ENST00000266679 LAMTOR2Q9Y2Q5 125 aa9.91□□□□□ -0.82
CPSF6-201ENST00000266679 U3KQK5 164 aa9.91□□□□□ -0.82
CPSF6-201ENST00000266679 NSD1Q96L73 2696 aaPredicted RBP9.91□□□□□ -0.82
CPSF6-201ENST00000266679 FABP5P3A8MUU1 101 aa9.9□□□□□ -0.82
CPSF6-201ENST00000266679 NCR2O95944 276 aa9.9□□□□□ -0.82
CPSF6-201ENST00000266679 COL5A1-AS1Q5SY13 56 aa9.9□□□□□ -0.82
CPSF6-201ENST00000266679 DMRTA1Q5VZB9 504 aa9.9□□□□□ -0.82
CPSF6-201ENST00000266679 PET117Q6UWS5 81 aa9.9□□□□□ -0.82
CPSF6-201ENST00000266679 C8orf86Q6ZUL3 223 aa9.9□□□□□ -0.82
CPSF6-201ENST00000266679 PMCHL2Q9BQD1 86 aa9.9□□□□□ -0.82
CPSF6-201ENST00000266679 IGHV4-30-2A0A087WSY4 118 aa9.9□□□□□ -0.83
CPSF6-201ENST00000266679 FAM223BA6NKX1 122 aa9.9□□□□□ -0.83
CPSF6-201ENST00000266679 ATP5J2P56134 94 aa9.9□□□□□ -0.83
CPSF6-201ENST00000266679 CLEC2AQ6UVW9 174 aa9.9□□□□□ -0.83
CPSF6-201ENST00000266679 ZNF575Q86XF7 245 aa9.9□□□□□ -0.83
CPSF6-201ENST00000266679 FAM223AQ8IWN6 122 aa9.9□□□□□ -0.83
CPSF6-201ENST00000266679 OR10AG1Q8NH19 301 aa9.9□□□□□ -0.83
CPSF6-201ENST00000266679 FOXC2Q99958 501 aa9.9□□□□□ -0.83
CPSF6-201ENST00000266679 RBAKDNA6NC62 111 aa9.89□□□□□ -0.83
CPSF6-201ENST00000266679 PPIFP30405 207 aaKnown RBP9.89□□□□□ -0.83
CPSF6-201ENST00000266679 ARL3P36405 182 aa9.89□□□□□ -0.83
CPSF6-201ENST00000266679 HINT1P49773 126 aaPredicted RBP9.89□□□□□ -0.83
CPSF6-201ENST00000266679 SRSF2Q01130 221 aaKnown RBP9.89□□□□□ -0.83
CPSF6-201ENST00000266679 CYB5R2Q6BCY4 276 aa9.89□□□□□ -0.83
CPSF6-201ENST00000266679 STPG4Q8N801 248 aa9.89□□□□□ -0.83
CPSF6-201ENST00000266679 WFDC11Q8NEX6 87 aa9.89□□□□□ -0.83
CPSF6-201ENST00000266679 AGPAT4-IT1Q9H0P7 198 aa9.89□□□□□ -0.83
CPSF6-201ENST00000266679 MSRB1Q9NZV6 116 aa9.89□□□□□ -0.83
CPSF6-201ENST00000266679 TRBV12-3P01733 135 aa9.88□□□□□ -0.83
CPSF6-201ENST00000266679 CKS2P33552 79 aa9.88□□□□□ -0.83
CPSF6-201ENST00000266679 U3KQE9 123 aa9.88□□□□□ -0.83
CPSF6-201ENST00000266679 H3BUX3 64 aa9.88□□□□□ -0.83
CPSF6-201ENST00000266679 NPYP01303 97 aa9.88□□□□□ -0.83
CPSF6-201ENST00000266679 CRIP2P52943 208 aaPredicted RBP9.88□□□□□ -0.83
CPSF6-201ENST00000266679 FXYD7P58549 80 aa9.88□□□□□ -0.83
CPSF6-201ENST00000266679 DEFB113Q30KQ7 82 aa9.88□□□□□ -0.83
CPSF6-201ENST00000266679 LINC01559Q495D7 138 aa9.88□□□□□ -0.83
CPSF6-201ENST00000266679 TMEM78Q5T7P6 136 aa9.88□□□□□ -0.83
CPSF6-201ENST00000266679 ZNF747Q9BV97 191 aa9.88□□□□□ -0.83
CPSF6-201ENST00000266679 MEGF9Q9H1U4 602 aa9.88□□□□□ -0.83
CPSF6-201ENST00000266679 ST20Q9HBF5 79 aa9.88□□□□□ -0.83
CPSF6-201ENST00000266679 MRPS16Q9Y3D3 137 aaKnown RBP9.88□□□□□ -0.83
CPSF6-201ENST00000266679 A0A096LNJ9 63 aa9.87□□□□□ -0.83
CPSF6-201ENST00000266679 HSBP1L1C9JCN9 74 aa9.87□□□□□ -0.83
CPSF6-201ENST00000266679 OR8A1Q8NGG7 326 aa9.87□□□□□ -0.83
CPSF6-201ENST00000266679 LINC01545Q5VT33 79 aa9.87□□□□□ -0.83
CPSF6-201ENST00000266679 UNQ9165/PRO28630Q6UXU0 137 aa9.87□□□□□ -0.83
CPSF6-201ENST00000266679 C16orf92Q96LL3 132 aa9.87□□□□□ -0.83
CPSF6-201ENST00000266679 SMR3AQ99954 134 aa9.87□□□□□ -0.83
CPSF6-201ENST00000266679 TMEM208Q9BTX3 173 aa9.87□□□□□ -0.83
CPSF6-201ENST00000266679 C11orf21Q9P2W6 132 aa9.87□□□□□ -0.83
CPSF6-201ENST00000266679 NDUFS8O00217 210 aa9.86□□□□□ -0.83
CPSF6-201ENST00000266679 IGHV3-11P01762 117 aa9.86□□□□□ -0.83
CPSF6-201ENST00000266679 KRTAP1-3Q8IUG1 177 aa9.86□□□□□ -0.83
CPSF6-201ENST00000266679 GLMPQ8WWB7 406 aa9.86□□□□□ -0.83
CPSF6-201ENST00000266679 MRPL53Q96EL3 112 aaKnown RBP9.86□□□□□ -0.83
CPSF6-201ENST00000266679 RNF185Q96GF1 192 aa9.86□□□□□ -0.83
CPSF6-201ENST00000266679 IGKV3D-20A0A0C4DH25 116 aa9.86□□□□□ -0.83
CPSF6-201ENST00000266679 A6NDX4 124 aa9.86□□□□□ -0.83
CPSF6-201ENST00000266679 SMAD7O15105 426 aaKnown RBP9.86□□□□□ -0.83
CPSF6-201ENST00000266679 FOXE3Q13461 319 aa9.86□□□□□ -0.83
CPSF6-201ENST00000266679 C20orf173Q96LM9 149 aa9.86□□□□□ -0.83
CPSF6-201ENST00000266679 MSMBP08118 114 aa9.85□□□□□ -0.83
CPSF6-201ENST00000266679 RIPPLY3P57055 190 aa9.85□□□□□ -0.83
CPSF6-201ENST00000266679 HIST1H1AQ02539 215 aaPredicted RBP9.85□□□□□ -0.83
CPSF6-201ENST00000266679 PRSS57Q6UWY2 283 aa9.85□□□□□ -0.83
CPSF6-201ENST00000266679 Q6ZQT7 251 aa9.85□□□□□ -0.83
CPSF6-201ENST00000266679 ZNF738Q8NE65 137 aa9.85□□□□□ -0.83
CPSF6-201ENST00000266679 DLEU1O43261 78 aa9.84□□□□□ -0.83
CPSF6-201ENST00000266679 GAS8-AS1O95177 125 aa9.84□□□□□ -0.83
CPSF6-201ENST00000266679 IGF1P05019 195 aa9.84□□□□□ -0.83
CPSF6-201ENST00000266679 PF4V1P10720 104 aa9.84□□□□□ -0.83
CPSF6-201ENST00000266679 LCNL1Q6ZST4 164 aa9.84□□□□□ -0.83
CPSF6-201ENST00000266679 ATP6V0BQ99437 205 aa9.84□□□□□ -0.83
CPSF6-201ENST00000266679 CNFNQ9BYD5 112 aa9.84□□□□□ -0.83
CPSF6-201ENST00000266679 SCRT2Q9NQ03 307 aa9.84□□□□□ -0.83
CPSF6-201ENST00000266679 C9orf47Q6ZRZ4 202 aa9.84□□□□□ -0.83
CPSF6-201ENST00000266679 Q6ZS46 218 aa9.84□□□□□ -0.83
CPSF6-201ENST00000266679 C9orf139Q6ZV77 190 aa9.84□□□□□ -0.83
CPSF6-201ENST00000266679 KLK15Q9H2R5 256 aa9.84□□□□□ -0.83
CPSF6-201ENST00000266679 CSPG4Q6UVK1 2322 aa9.84□□□□□ -0.83
CPSF6-201ENST00000266679 J3KRW8 73 aa9.83□□□□□ -0.84
CPSF6-201ENST00000266679 NDUFA4O00483 81 aa9.83□□□□□ -0.84
CPSF6-201ENST00000266679 IGHG2P01859 326 aa9.83□□□□□ -0.84
CPSF6-201ENST00000266679 HBDP02042 147 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms