RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 HOXA5P20719 270 aa11.17□□□□□ -0.62
PDLIM2-201ENST00000265810 AMMECR1LQ6DCA0 310 aa11.17□□□□□ -0.62
PDLIM2-201ENST00000265810 C16orf54Q6UWD8 224 aa11.17□□□□□ -0.62
PDLIM2-201ENST00000265810 RCHY1Q96PM5 261 aa11.17□□□□□ -0.62
PDLIM2-201ENST00000265810 TMEM89A2RUT3 159 aa11.17□□□□□ -0.62
PDLIM2-201ENST00000265810 K7EN84 100 aa11.17□□□□□ -0.62
PDLIM2-201ENST00000265810 INSP01308 110 aa11.17□□□□□ -0.62
PDLIM2-201ENST00000265810 OR9G4Q8NGQ1 327 aa11.17□□□□□ -0.62
PDLIM2-201ENST00000265810 C10orf99Q6UWK7 81 aa11.16□□□□□ -0.62
PDLIM2-201ENST00000265810 Q6ZS46 218 aa11.16□□□□□ -0.62
PDLIM2-201ENST00000265810 CITED2Q99967 270 aaPredicted RBP11.16□□□□□ -0.62
PDLIM2-201ENST00000265810 NDUFS6O75380 124 aaKnown RBP11.16□□□□□ -0.62
PDLIM2-201ENST00000265810 OR10J3Q5JRS4 329 aa11.16□□□□□ -0.62
PDLIM2-201ENST00000265810 GPHB5Q86YW7 130 aa11.16□□□□□ -0.62
PDLIM2-201ENST00000265810 ATP6V0BQ99437 205 aa11.16□□□□□ -0.62
PDLIM2-201ENST00000265810 KLK9Q9UKQ9 250 aa11.16□□□□□ -0.62
PDLIM2-201ENST00000265810 HECTD1Q9ULT8 2610 aa11.16□□□□□ -0.62
PDLIM2-201ENST00000265810 C14orf178Q8N769 122 aaPredicted RBP11.16□□□□□ -0.62
PDLIM2-201ENST00000265810 PPBPP02775 128 aa11.15□□□□□ -0.62
PDLIM2-201ENST00000265810 FAM231DQ6ZW35 169 aa11.15□□□□□ -0.62
PDLIM2-201ENST00000265810 ZNF503Q96F45 646 aa11.15□□□□□ -0.62
PDLIM2-201ENST00000265810 CENPEQ02224 2701 aa11.15□□□□□ -0.62
PDLIM2-201ENST00000265810 D6R8Y8 96 aa11.15□□□□□ -0.62
PDLIM2-201ENST00000265810 UBE2L6O14933 153 aa11.15□□□□□ -0.62
PDLIM2-201ENST00000265810 LY6G6DO95868 133 aa11.15□□□□□ -0.62
PDLIM2-201ENST00000265810 LTAP01374 205 aa11.15□□□□□ -0.62
PDLIM2-201ENST00000265810 C21orf62-AS1Q17RA5 79 aa11.15□□□□□ -0.62
PDLIM2-201ENST00000265810 MBD6Q96DN6 1003 aa11.15□□□□□ -0.62
PDLIM2-201ENST00000265810 IGHV3-73A0A0B4J1V6 119 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 CLPSL1A2RUU4 121 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 CDKN1BP46527 198 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 PAX2Q02962 417 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 GFI1BQ5VTD9 330 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 RASL11AQ6T310 242 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 AMN1Q8IY45 258 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 ATOH7Q8N100 152 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 C1QTNF4Q9BXJ3 329 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 C2orf70A6NJV1 201 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 LINC00614P0C842 121 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 GFRA4Q9GZZ7 299 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 CELSR3Q9NYQ7 3312 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 TRGV1A0A0A0MS02 117 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 TMEM213A2RRL7 107 aa11.14□□□□□ -0.63
PDLIM2-201ENST00000265810 TCAPO15273 167 aa11.13□□□□□ -0.63
PDLIM2-201ENST00000265810 CT83Q5H943 113 aa11.13□□□□□ -0.63
PDLIM2-201ENST00000265810 SPEGQ15772 3267 aa11.13□□□□□ -0.63
PDLIM2-201ENST00000265810 C7orf71A4D174 169 aa11.13□□□□□ -0.63
PDLIM2-201ENST00000265810 K7EMT4 169 aa11.13□□□□□ -0.63
PDLIM2-201ENST00000265810 PTTG1IPP53801 180 aa11.13□□□□□ -0.63
PDLIM2-201ENST00000265810 ZNF415Q09FC8 603 aa11.13□□□□□ -0.63
PDLIM2-201ENST00000265810 ANXA2RQ3ZCQ2 193 aa11.13□□□□□ -0.63
PDLIM2-201ENST00000265810 Q6ZSV7 163 aa11.13□□□□□ -0.63
PDLIM2-201ENST00000265810 NIT1Q86X76 327 aa11.13□□□□□ -0.63
PDLIM2-201ENST00000265810 SMR3AQ99954 134 aa11.13□□□□□ -0.63
PDLIM2-201ENST00000265810 ST20Q9HBF5 79 aa11.13□□□□□ -0.63
PDLIM2-201ENST00000265810 A0A1B0GUS0 222 aa11.13□□□□□ -0.63
PDLIM2-201ENST00000265810 IGLC2P0DOY2 106 aa11.13□□□□□ -0.63
PDLIM2-201ENST00000265810 PRAC2D3DTV9 90 aa11.12□□□□□ -0.63
PDLIM2-201ENST00000265810 HERVK_113P61574 105 aa11.12□□□□□ -0.63
PDLIM2-201ENST00000265810 FAM231BA6NCW3 169 aa11.12□□□□□ -0.63
PDLIM2-201ENST00000265810 DEFB1P60022 68 aa11.12□□□□□ -0.63
PDLIM2-201ENST00000265810 DEFB104AQ8WTQ1 72 aa11.12□□□□□ -0.63
PDLIM2-201ENST00000265810 DMRT1Q9Y5R6 373 aa11.12□□□□□ -0.63
PDLIM2-201ENST00000265810 A0A087WWL8 130 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 TRGV4A0A0C4DH28 118 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 CD28P10747 220 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 TMEM70Q9BUB7 260 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 SMKR1H3BMG3 65 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 EGR2P11161 476 aaPredicted RBP11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 NMUP48645 174 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 TMEM97Q5BJF2 176 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 TMEM256Q8N2U0 113 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 IGHV3-53P01767 116 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 RIPPLY3P57055 190 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 SMAGPQ0VAQ4 97 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 ZNF876PQ49A33 203 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 DEFB121Q5J5C9 76 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 APRG1Q8IVJ8 170 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 DPH3P1Q9H4G8 78 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 IFITM10A6NMD0 228 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 PMCHL1Q16048 86 aa11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 MRPL53Q96EL3 112 aaKnown RBP11.11□□□□□ -0.63
PDLIM2-201ENST00000265810 IGKV3OR2-268A0A0C4DH90 116 aa11.1□□□□□ -0.63
PDLIM2-201ENST00000265810 HIST2H2BDQ6DRA6 164 aa11.1□□□□□ -0.63
PDLIM2-201ENST00000265810 C4orf3Q8WVX3 66 aa11.1□□□□□ -0.63
PDLIM2-201ENST00000265810 SRSF2Q01130 221 aaKnown RBP11.1□□□□□ -0.63
PDLIM2-201ENST00000265810 OR4C5Q8NGB2 326 aa11.1□□□□□ -0.63
PDLIM2-201ENST00000265810 PSMG3-AS1Q96PY0 264 aa11.1□□□□□ -0.63
PDLIM2-201ENST00000265810 SCGB3A1Q96QR1 104 aa11.1□□□□□ -0.63
PDLIM2-201ENST00000265810 IGHV1OR15-1A0A075B7D0 117 aa11.1□□□□□ -0.63
PDLIM2-201ENST00000265810 ZNF324O75467 553 aaPredicted RBP11.1□□□□□ -0.63
PDLIM2-201ENST00000265810 SCGB1D4Q6XE38 83 aa11.1□□□□□ -0.63
PDLIM2-201ENST00000265810 FOXI2Q6ZQN5 318 aa11.1□□□□□ -0.63
PDLIM2-201ENST00000265810 NXT2Q9NPJ8 142 aaKnown RBP11.1□□□□□ -0.63
PDLIM2-201ENST00000265810 A0A1B0GV90 55 aa11.09□□□□□ -0.63
PDLIM2-201ENST00000265810 DLX4Q92988 240 aaPredicted RBP11.09□□□□□ -0.63
PDLIM2-201ENST00000265810 SMIM27A0A1W2PRY6 76 aa11.09□□□□□ -0.63
PDLIM2-201ENST00000265810 ARL6IP6Q8N6S5 226 aa11.09□□□□□ -0.63
PDLIM2-201ENST00000265810 SPAG8Q99932 426 aaPredicted RBP11.09□□□□□ -0.63
PDLIM2-201ENST00000265810 RBAKDNA6NC62 111 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms