RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 TEX43Q6ZNM6 134 aa12.88□□□□□ -0.35
CHKA-201ENST00000265689 ZNF575Q86XF7 245 aa12.88□□□□□ -0.35
CHKA-201ENST00000265689 C16orf92Q96LL3 132 aa12.88□□□□□ -0.35
CHKA-201ENST00000265689 NPFFR1Q9GZQ6 430 aa12.88□□□□□ -0.35
CHKA-201ENST00000265689 NIPBLQ6KC79 2804 aaeCLIP12.87□□□□□ -0.35
CHKA-201ENST00000265689 HSBP1O75506 76 aa12.87□□□□□ -0.35
CHKA-201ENST00000265689 TMEM213A2RRL7 107 aa12.87□□□□□ -0.35
CHKA-201ENST00000265689 FSHBP01225 129 aa12.87□□□□□ -0.35
CHKA-201ENST00000265689 BORCS7Q96B45 105 aa12.87□□□□□ -0.35
CHKA-201ENST00000265689 C20orf173Q96LM9 149 aa12.87□□□□□ -0.35
CHKA-201ENST00000265689 SELENOKQ9Y6D0 94 aa12.87□□□□□ -0.35
CHKA-201ENST00000265689 ORM1P02763 201 aa12.86□□□□□ -0.35
CHKA-201ENST00000265689 TM4SF20Q53R12 229 aa12.86□□□□□ -0.35
CHKA-201ENST00000265689 GPHB5Q86YW7 130 aa12.86□□□□□ -0.35
CHKA-201ENST00000265689 MRPL53Q96EL3 112 aaKnown RBP12.86□□□□□ -0.35
CHKA-201ENST00000265689 FABP5P3A8MUU1 101 aa12.86□□□□□ -0.35
CHKA-201ENST00000265689 Q8N976 141 aa12.85□□□□□ -0.35
CHKA-201ENST00000265689 GATD1Q8NB37 220 aa12.85□□□□□ -0.35
CHKA-201ENST00000265689 A0A1B0GW15 77 aa12.85□□□□□ -0.35
CHKA-201ENST00000265689 PSMB8P28062 276 aa12.85□□□□□ -0.35
CHKA-201ENST00000265689 TMEM78Q5T7P6 136 aa12.85□□□□□ -0.35
CHKA-201ENST00000265689 LRRC75A-AS1Q8N1F1 130 aa12.85□□□□□ -0.35
CHKA-201ENST00000265689 VAMP8Q9BV40 100 aa12.85□□□□□ -0.35
CHKA-201ENST00000265689 M0R2Z0 102 aa12.84□□□□□ -0.35
CHKA-201ENST00000265689 C3orf79P0CE67 100 aa12.84□□□□□ -0.35
CHKA-201ENST00000265689 ZNF138P52744 262 aa12.84□□□□□ -0.35
CHKA-201ENST00000265689 FER1L6-AS1Q8NA97 138 aa12.84□□□□□ -0.35
CHKA-201ENST00000265689 SMR3AQ99954 134 aa12.84□□□□□ -0.35
CHKA-201ENST00000265689 PEF1Q9UBV8 284 aaKnown RBP12.84□□□□□ -0.35
CHKA-201ENST00000265689 ZNF580Q9UK33 172 aa12.84□□□□□ -0.35
CHKA-201ENST00000265689 HIVEP1P15822 2718 aa12.84□□□□□ -0.35
CHKA-201ENST00000265689 ZNF25P17030 456 aaPredicted RBP12.84□□□□□ -0.35
CHKA-201ENST00000265689 EDN2P20800 178 aa12.84□□□□□ -0.35
CHKA-201ENST00000265689 RPS20P60866 119 aaKnown RBP12.84□□□□□ -0.35
CHKA-201ENST00000265689 PMCHL1Q16048 86 aa12.84□□□□□ -0.35
CHKA-201ENST00000265689 Q6YL49 198 aa12.84□□□□□ -0.35
CHKA-201ENST00000265689 C9orf139Q6ZV77 190 aa12.84□□□□□ -0.35
CHKA-201ENST00000265689 C20orf144Q9BQM9 153 aa12.84□□□□□ -0.35
CHKA-201ENST00000265689 MIEN1Q9BRT3 115 aa12.84□□□□□ -0.35
CHKA-201ENST00000265689 VPREB3Q9UKI3 123 aa12.84□□□□□ -0.35
CHKA-201ENST00000265689 RPL11P62913 178 aaKnown RBP12.83□□□□□ -0.36
CHKA-201ENST00000265689 BATFQ16520 125 aa12.83□□□□□ -0.36
CHKA-201ENST00000265689 CYB5R2Q6BCY4 276 aa12.83□□□□□ -0.36
CHKA-201ENST00000265689 C9orf47Q6ZRZ4 202 aa12.83□□□□□ -0.36
CHKA-201ENST00000265689 ZNF738Q8NE65 137 aa12.83□□□□□ -0.36
CHKA-201ENST00000265689 IGKV3-7A0A075B6H7 116 aa12.83□□□□□ -0.36
CHKA-201ENST00000265689 IGLC6P0CF74 106 aa12.83□□□□□ -0.36
CHKA-201ENST00000265689 HIST2H2BDQ6DRA6 164 aa12.83□□□□□ -0.36
CHKA-201ENST00000265689 ZNF493Q6ZR52 646 aa12.83□□□□□ -0.36
CHKA-201ENST00000265689 RHPN1-AS1Q9BWJ2 59 aa12.83□□□□□ -0.36
CHKA-201ENST00000265689 IGHV7-4-1A0A0J9YVY3 117 aa12.82□□□□□ -0.36
CHKA-201ENST00000265689 SOCS3O14543 225 aa12.82□□□□□ -0.36
CHKA-201ENST00000265689 CTRLP40313 264 aa12.82□□□□□ -0.36
CHKA-201ENST00000265689 DEFB1P60022 68 aa12.82□□□□□ -0.36
CHKA-201ENST00000265689 C11orf21Q9P2W6 132 aa12.82□□□□□ -0.36
CHKA-201ENST00000265689 CSN3P07498 182 aa12.82□□□□□ -0.36
CHKA-201ENST00000265689 SRSF2Q01130 221 aaKnown RBP12.82□□□□□ -0.36
CHKA-201ENST00000265689 Q6ZQT7 251 aa12.82□□□□□ -0.36
CHKA-201ENST00000265689 FAM181BA6NEQ2 426 aa12.81□□□□□ -0.36
CHKA-201ENST00000265689 HOXA3O43365 443 aaPredicted RBP12.81□□□□□ -0.36
CHKA-201ENST00000265689 LINC01559Q495D7 138 aa12.81□□□□□ -0.36
CHKA-201ENST00000265689 AMN1Q8IY45 258 aa12.81□□□□□ -0.36
CHKA-201ENST00000265689 DAZ1Q9NQZ3 744 aaKnown RBP12.81□□□□□ -0.36
CHKA-201ENST00000265689 RPLP1P05386 114 aaKnown RBP12.81□□□□□ -0.36
CHKA-201ENST00000265689 LINC00614P0C842 121 aa12.81□□□□□ -0.36
CHKA-201ENST00000265689 TWIST1Q15672 202 aa12.81□□□□□ -0.36
CHKA-201ENST00000265689 EBLN2Q6P2I7 272 aa12.81□□□□□ -0.36
CHKA-201ENST00000265689 CLEC5AQ9NY25 188 aa12.81□□□□□ -0.36
CHKA-201ENST00000265689 IGKV3D-20A0A0C4DH25 116 aa12.8□□□□□ -0.36
CHKA-201ENST00000265689 FOSL1P15407 271 aa12.8□□□□□ -0.36
CHKA-201ENST00000265689 SRD5A1P18405 259 aa12.8□□□□□ -0.36
CHKA-201ENST00000265689 MSRB1Q9NZV6 116 aa12.8□□□□□ -0.36
CHKA-201ENST00000265689 FOXE3Q13461 319 aa12.8□□□□□ -0.36
CHKA-201ENST00000265689 FAM104BQ5XKR9 115 aa12.8□□□□□ -0.36
CHKA-201ENST00000265689 CHCHD1Q96BP2 118 aaKnown RBP12.8□□□□□ -0.36
CHKA-201ENST00000265689 SMPXQ9UHP9 88 aa12.8□□□□□ -0.36
CHKA-201ENST00000265689 IGHV1-24A0A0C4DH33 117 aa12.79□□□□□ -0.36
CHKA-201ENST00000265689 FAM106AQ4KMX7 169 aa12.79□□□□□ -0.36
CHKA-201ENST00000265689 ZNF702PQ9H963 129 aa12.79□□□□□ -0.36
CHKA-201ENST00000265689 HIST1H1AQ02539 215 aaPredicted RBP12.79□□□□□ -0.36
CHKA-201ENST00000265689 PRR9Q5T870 116 aa12.79□□□□□ -0.36
CHKA-201ENST00000265689 D6R8Y8 96 aa12.78□□□□□ -0.36
CHKA-201ENST00000265689 J3KRW8 73 aa12.78□□□□□ -0.36
CHKA-201ENST00000265689 TMEM208Q9BTX3 173 aa12.78□□□□□ -0.36
CHKA-201ENST00000265689 PPP1R14DQ9NXH3 145 aa12.78□□□□□ -0.36
CHKA-201ENST00000265689 C2orf70A6NJV1 201 aa12.77□□□□□ -0.37
CHKA-201ENST00000265689 F6UB75 175 aa12.77□□□□□ -0.37
CHKA-201ENST00000265689 TFPI2P48307 235 aa12.77□□□□□ -0.37
CHKA-201ENST00000265689 MRPL51Q4U2R6 128 aaKnown RBP12.77□□□□□ -0.37
CHKA-201ENST00000265689 LINC00173Q6ZV60 143 aa12.77□□□□□ -0.37
CHKA-201ENST00000265689 TMEM89A2RUT3 159 aa12.77□□□□□ -0.37
CHKA-201ENST00000265689 K7EMT4 169 aa12.77□□□□□ -0.37
CHKA-201ENST00000265689 SPATA45Q537H7 98 aa12.77□□□□□ -0.37
CHKA-201ENST00000265689 ATOH7Q8N100 152 aa12.77□□□□□ -0.37
CHKA-201ENST00000265689 OR10J6PQ8NGY7 276 aa12.77□□□□□ -0.37
CHKA-201ENST00000265689 OVOL1O14753 267 aa12.76□□□□□ -0.37
CHKA-201ENST00000265689 NPSP0C0P6 89 aa12.76□□□□□ -0.37
CHKA-201ENST00000265689 PRSS57Q6UWY2 283 aa12.76□□□□□ -0.37
CHKA-201ENST00000265689 LINC00477Q96M19 166 aa12.76□□□□□ -0.37
CHKA-201ENST00000265689 CNFNQ9BYD5 112 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms