RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 B9A039 149 aa13.58□□□□□ -0.24
SRF-201ENST00000265354 C9JAW5 83 aa13.58□□□□□ -0.24
SRF-201ENST00000265354 C14orf178Q8N769 122 aaPredicted RBP13.58□□□□□ -0.24
SRF-201ENST00000265354 KLF12Q9Y4X4 402 aa13.58□□□□□ -0.24
SRF-201ENST00000265354 ATG2AQ2TAZ0 1938 aa13.58□□□□□ -0.24
SRF-201ENST00000265354 HAX1O00165 279 aa13.58□□□□□ -0.24
SRF-201ENST00000265354 POU2AF1Q16633 256 aa13.58□□□□□ -0.24
SRF-201ENST00000265354 WIPF2Q8TF74 440 aaPredicted RBP13.58□□□□□ -0.24
SRF-201ENST00000265354 PIMREGQ9BSJ6 248 aa13.58□□□□□ -0.24
SRF-201ENST00000265354 PTPRSQ13332 1948 aa13.58□□□□□ -0.24
SRF-201ENST00000265354 LTAP01374 205 aa13.57□□□□□ -0.24
SRF-201ENST00000265354 ZNF492Q9P255 531 aa13.57□□□□□ -0.24
SRF-201ENST00000265354 DSPP15924 2871 aaKnown RBP13.57□□□□□ -0.24
SRF-201ENST00000265354 LOXP28300 417 aaPredicted RBP13.57□□□□□ -0.24
SRF-201ENST00000265354 SPATA12Q7Z6I5 190 aa13.57□□□□□ -0.24
SRF-201ENST00000265354 GFRA4Q9GZZ7 299 aa13.57□□□□□ -0.24
SRF-201ENST00000265354 MRPL35Q9NZE8 188 aaKnown RBP13.57□□□□□ -0.24
SRF-201ENST00000265354 LGALS3P17931 250 aaKnown RBP13.57□□□□□ -0.24
SRF-201ENST00000265354 SVIPQ8NHG7 77 aa13.57□□□□□ -0.24
SRF-201ENST00000265354 C1orf159Q96HA4 380 aa13.57□□□□□ -0.24
SRF-201ENST00000265354 A0A0G2JNJ9 132 aa13.56□□□□□ -0.24
SRF-201ENST00000265354 F8W1H4 67 aa13.56□□□□□ -0.24
SRF-201ENST00000265354 NDUFS7O75251 213 aa13.56□□□□□ -0.24
SRF-201ENST00000265354 ZNF56Q15929 161 aa13.56□□□□□ -0.24
SRF-201ENST00000265354 Q9UFV3 132 aa13.56□□□□□ -0.24
SRF-201ENST00000265354 ANKRD11Q6UB99 2663 aaPredicted RBP13.56□□□□□ -0.24
SRF-201ENST00000265354 TMEM219Q86XT9 240 aa13.56□□□□□ -0.24
SRF-201ENST00000265354 RAX2Q96IS3 184 aa13.56□□□□□ -0.24
SRF-201ENST00000265354 SCRT2Q9NQ03 307 aa13.56□□□□□ -0.24
SRF-201ENST00000265354 MBD3L4A6NDZ8 208 aaPredicted RBP13.56□□□□□ -0.24
SRF-201ENST00000265354 MBD3L3A6NE82 208 aaPredicted RBP13.56□□□□□ -0.24
SRF-201ENST00000265354 MBD3L5A6NJ08 208 aaPredicted RBP13.56□□□□□ -0.24
SRF-201ENST00000265354 SRSF1Q07955 248 aaKnown RBP eCLIP13.56□□□□□ -0.24
SRF-201ENST00000265354 MBD3L2Q8NHZ7 208 aaPredicted RBP13.56□□□□□ -0.24
SRF-201ENST00000265354 CT83Q5H943 113 aa13.56□□□□□ -0.24
SRF-201ENST00000265354 TRGV3P03979 118 aa13.55□□□□□ -0.24
SRF-201ENST00000265354 EIF4EBP1Q13541 118 aaPredicted RBP13.55□□□□□ -0.24
SRF-201ENST00000265354 CTSZQ9UBR2 303 aa13.55□□□□□ -0.24
SRF-201ENST00000265354 USP9XQ93008 2570 aaPredicted RBP13.55□□□□□ -0.24
SRF-201ENST00000265354 VWC2LB2RUY7 222 aa13.55□□□□□ -0.24
SRF-201ENST00000265354 SP5Q6BEB4 398 aaPredicted RBP13.55□□□□□ -0.24
SRF-201ENST00000265354 NEGR1Q7Z3B1 354 aa13.55□□□□□ -0.24
SRF-201ENST00000265354 KIR2DL4Q99706 377 aa13.55□□□□□ -0.24
SRF-201ENST00000265354 A0A0U1RRA0 63 aa13.54□□□□□ -0.24
SRF-201ENST00000265354 LAGE3Q14657 143 aa13.54□□□□□ -0.24
SRF-201ENST00000265354 ZNF672Q499Z4 452 aaPredicted RBP13.54□□□□□ -0.24
SRF-201ENST00000265354 OR13C6PQ8NH95 151 aa13.54□□□□□ -0.24
SRF-201ENST00000265354 EGR2P11161 476 aaPredicted RBP13.54□□□□□ -0.24
SRF-201ENST00000265354 C20orf78Q9BR46 151 aa13.54□□□□□ -0.24
SRF-201ENST00000265354 DKK4Q9UBT3 224 aa13.54□□□□□ -0.24
SRF-201ENST00000265354 IFITM1P13164 125 aa13.54□□□□□ -0.24
SRF-201ENST00000265354 PRR25Q96S07 402 aa13.54□□□□□ -0.24
SRF-201ENST00000265354 IGKV3D-20A0A0C4DH25 116 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 FAM215AQ9Y5M1 114 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 CPAMD8Q8IZJ3 1885 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 FXYD2P54710 66 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 FAM159AQ6UWV7 190 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 C8orf86Q6ZUL3 223 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 C22orf34Q6ZV56 151 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 IL17RELQ6ZVW7 336 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 Q8N976 141 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 C1QTNF4Q9BXJ3 329 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 NPIPB6E9PJ23 425 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 IGKV1-17P01599 117 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 PRSS33Q8NF86 280 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 LINC01549A6NIU2 74 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 GP9P14770 177 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 ZNF491Q8N8L2 437 aa13.53□□□□□ -0.24
SRF-201ENST00000265354 K7EM74 188 aa13.52□□□□□ -0.24
SRF-201ENST00000265354 RNASE1P07998 156 aaKnown RBP13.52□□□□□ -0.24
SRF-201ENST00000265354 NPC2P61916 151 aa13.52□□□□□ -0.24
SRF-201ENST00000265354 C5orf64Q2M2E5 130 aa13.52□□□□□ -0.24
SRF-201ENST00000265354 MBD6Q96DN6 1003 aa13.52□□□□□ -0.24
SRF-201ENST00000265354 TRAV2A0A0B4J234 112 aa13.52□□□□□ -0.25
SRF-201ENST00000265354 E7EQL1 145 aa13.52□□□□□ -0.25
SRF-201ENST00000265354 NUP37Q8NFH4 326 aa13.52□□□□□ -0.25
SRF-201ENST00000265354 ASIPP42127 132 aa13.52□□□□□ -0.25
SRF-201ENST00000265354 LINC01545Q5VT33 79 aa13.52□□□□□ -0.25
SRF-201ENST00000265354 IGKV1D-37A0A075B6S9 117 aa13.51□□□□□ -0.25
SRF-201ENST00000265354 LHBP01229 141 aa13.51□□□□□ -0.25
SRF-201ENST00000265354 THAP8Q8NA92 274 aa13.51□□□□□ -0.25
SRF-201ENST00000265354 GATA4P43694 442 aa13.51□□□□□ -0.25
SRF-201ENST00000265354 PRR30Q53SZ7 412 aaPredicted RBP13.51□□□□□ -0.25
SRF-201ENST00000265354 LGALS9BQ3B8N2 356 aa13.51□□□□□ -0.25
SRF-201ENST00000265354 LGALS9CQ6DKI2 356 aa13.51□□□□□ -0.25
SRF-201ENST00000265354 PPDPFLQ8WWR9 84 aa13.51□□□□□ -0.25
SRF-201ENST00000265354 PAX1P15863 534 aa13.5□□□□□ -0.25
SRF-201ENST00000265354 CHD8Q9HCK8 2581 aa13.5□□□□□ -0.25
SRF-201ENST00000265354 DOPEY1Q5JWR5 2465 aa13.5□□□□□ -0.25
SRF-201ENST00000265354 G3V318 75 aa13.5□□□□□ -0.25
SRF-201ENST00000265354 EEF1AKMT3Q96AZ1 226 aa13.5□□□□□ -0.25
SRF-201ENST00000265354 DSCAMO60469 2012 aa13.49□□□□□ -0.25
SRF-201ENST00000265354 DTX2Q86UW9 622 aa13.49□□□□□ -0.25
SRF-201ENST00000265354 IGHV3OR16-12A0A075B7B8 117 aa13.49□□□□□ -0.25
SRF-201ENST00000265354 TRBV7-9A0A0J9YWB2 115 aa13.49□□□□□ -0.25
SRF-201ENST00000265354 CD7P09564 240 aa13.49□□□□□ -0.25
SRF-201ENST00000265354 SIVA1O15304 175 aa13.48□□□□□ -0.25
SRF-201ENST00000265354 Q71RC1 249 aaPredicted RBP13.48□□□□□ -0.25
SRF-201ENST00000265354 TRBV25-1A0A075B6N4 114 aa13.48□□□□□ -0.25
SRF-201ENST00000265354 A0A087WWL8 130 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms