RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 SPCS1Q9Y6A9 102 aa15.55■□□□□ 0.08
CSPG5-201ENST00000264723 PRRC2AP48634 2157 aaKnown RBP15.55■□□□□ 0.08
CSPG5-201ENST00000264723 EGR2P11161 476 aaPredicted RBP15.54■□□□□ 0.08
CSPG5-201ENST00000264723 LOC107984156A0A0G2JMH3 177 aa15.54■□□□□ 0.08
CSPG5-201ENST00000264723 ARL17AQ8IVW1 177 aa15.54■□□□□ 0.08
CSPG5-201ENST00000264723 TMEM158Q8WZ71 300 aa15.54■□□□□ 0.08
CSPG5-201ENST00000264723 H7C2G1 150 aa15.53■□□□□ 0.08
CSPG5-201ENST00000264723 HOXB4P17483 251 aaPredicted RBP15.53■□□□□ 0.08
CSPG5-201ENST00000264723 RHPN1-AS1Q9BWJ2 59 aa15.53■□□□□ 0.08
CSPG5-201ENST00000264723 ACANP16112 2415 aa15.53■□□□□ 0.08
CSPG5-201ENST00000264723 C2orf70A6NJV1 201 aa15.53■□□□□ 0.08
CSPG5-201ENST00000264723 MBD6Q96DN6 1003 aa15.53■□□□□ 0.08
CSPG5-201ENST00000264723 ZNF256Q9Y2P7 627 aaPredicted RBP15.53■□□□□ 0.08
CSPG5-201ENST00000264723 LOXL1Q08397 574 aaPredicted RBP15.53■□□□□ 0.08
CSPG5-201ENST00000264723 KLF5Q13887 457 aaPredicted RBP15.53■□□□□ 0.08
CSPG5-201ENST00000264723 Q1RN00 199 aa15.53■□□□□ 0.08
CSPG5-201ENST00000264723 SRSF8Q9BRL6 282 aaKnown RBP15.53■□□□□ 0.08
CSPG5-201ENST00000264723 IGHV4-39P01824 125 aa15.52■□□□□ 0.08
CSPG5-201ENST00000264723 PAX1P15863 534 aa15.52■□□□□ 0.08
CSPG5-201ENST00000264723 TTTY13Q9BZ97 58 aa15.52■□□□□ 0.08
CSPG5-201ENST00000264723 MS4A6AQ9H2W1 248 aa15.52■□□□□ 0.08
CSPG5-201ENST00000264723 TRBV7-1A0A0A6YYK4 115 aa15.52■□□□□ 0.07
CSPG5-201ENST00000264723 SMIM13P0DJ93 91 aa15.52■□□□□ 0.07
CSPG5-201ENST00000264723 ZC2HC1BQ5TFG8 222 aa15.52■□□□□ 0.07
CSPG5-201ENST00000264723 OR11H6Q8NGC7 330 aa15.52■□□□□ 0.07
CSPG5-201ENST00000264723 FAM110DQ8TAY7 271 aaPredicted RBP15.52■□□□□ 0.07
CSPG5-201ENST00000264723 SCGB3A1Q96QR1 104 aa15.52■□□□□ 0.07
CSPG5-201ENST00000264723 DKK2Q9UBU2 259 aa15.52■□□□□ 0.07
CSPG5-201ENST00000264723 LYPD1Q8N2G4 141 aa15.52■□□□□ 0.07
CSPG5-201ENST00000264723 SMIM12Q96EX1 92 aa15.52■□□□□ 0.07
CSPG5-201ENST00000264723 ADGRG4Q8IZF6 3080 aa15.51■□□□□ 0.07
CSPG5-201ENST00000264723 C8orf31Q8N9H6 132 aa15.51■□□□□ 0.07
CSPG5-201ENST00000264723 ZNF747Q9BV97 191 aa15.51■□□□□ 0.07
CSPG5-201ENST00000264723 LINC00574Q9H8X3 128 aa15.51■□□□□ 0.07
CSPG5-201ENST00000264723 TMEM14CQ9P0S9 112 aa15.51■□□□□ 0.07
CSPG5-201ENST00000264723 KLF12Q9Y4X4 402 aa15.51■□□□□ 0.07
CSPG5-201ENST00000264723 CFAP47Q6ZTR5 3102 aa15.51■□□□□ 0.07
CSPG5-201ENST00000264723 MEGF9Q9H1U4 602 aa15.51■□□□□ 0.07
CSPG5-201ENST00000264723 IGHV4-30-2A0A087WSY4 118 aa15.5■□□□□ 0.07
CSPG5-201ENST00000264723 PSMB11A5LHX3 300 aa15.5■□□□□ 0.07
CSPG5-201ENST00000264723 K7EMI3 77 aa15.5■□□□□ 0.07
CSPG5-201ENST00000264723 EMP1P54849 157 aa15.5■□□□□ 0.07
CSPG5-201ENST00000264723 SYNJ2BPP57105 145 aa15.5■□□□□ 0.07
CSPG5-201ENST00000264723 TMEM95Q3KNT9 176 aa15.5■□□□□ 0.07
CSPG5-201ENST00000264723 BVES-AS1Q5T3Y7 98 aa15.5■□□□□ 0.07
CSPG5-201ENST00000264723 JMJD8Q96S16 334 aa15.5■□□□□ 0.07
CSPG5-201ENST00000264723 IGHV7-81A0A0B4J1V7 117 aa15.5■□□□□ 0.07
CSPG5-201ENST00000264723 FAM231BA6NCW3 169 aa15.5■□□□□ 0.07
CSPG5-201ENST00000264723 CRYGCP07315 174 aa15.5■□□□□ 0.07
CSPG5-201ENST00000264723 DYNAPQ8N1N2 210 aa15.5■□□□□ 0.07
CSPG5-201ENST00000264723 OR2K2Q8NGT1 345 aa15.5■□□□□ 0.07
CSPG5-201ENST00000264723 GAGE12BA1L429 117 aa15.49■□□□□ 0.07
CSPG5-201ENST00000264723 C19orf84I3L1E1 186 aa15.49■□□□□ 0.07
CSPG5-201ENST00000264723 TNFRSF6BO95407 300 aa15.49■□□□□ 0.07
CSPG5-201ENST00000264723 PIP4P2Q8N4L2 257 aa15.49■□□□□ 0.07
CSPG5-201ENST00000264723 C14orf178Q8N769 122 aaPredicted RBP15.49■□□□□ 0.07
CSPG5-201ENST00000264723 SYT8Q8NBV8 401 aa15.49■□□□□ 0.07
CSPG5-201ENST00000264723 RNASE8Q8TDE3 154 aaKnown RBP15.49■□□□□ 0.07
CSPG5-201ENST00000264723 IGHV4-38-2P0DP08 117 aa15.49■□□□□ 0.07
CSPG5-201ENST00000264723 BLCAPP62952 87 aa15.49■□□□□ 0.07
CSPG5-201ENST00000264723 KIR3DS1Q14943 382 aa15.49■□□□□ 0.07
CSPG5-201ENST00000264723 ANKRD39Q53RE8 183 aa15.49■□□□□ 0.07
CSPG5-201ENST00000264723 TRAV21A0A0B4J279 112 aa15.49■□□□□ 0.07
CSPG5-201ENST00000264723 OR11H12B2RN74 326 aa15.49■□□□□ 0.07
CSPG5-201ENST00000264723 OR11H1Q8NG94 326 aa15.49■□□□□ 0.07
CSPG5-201ENST00000264723 OR11H2Q8NH07 326 aa15.49■□□□□ 0.07
CSPG5-201ENST00000264723 DEFB1P60022 68 aa15.48■□□□□ 0.07
CSPG5-201ENST00000264723 PCP2Q8IVA1 136 aa15.48■□□□□ 0.07
CSPG5-201ENST00000264723 C19orf71A6NCJ1 209 aa15.48■□□□□ 0.07
CSPG5-201ENST00000264723 PRAC2D3DTV9 90 aa15.48■□□□□ 0.07
CSPG5-201ENST00000264723 MRPL52Q86TS9 123 aaKnown RBP15.48■□□□□ 0.07
CSPG5-201ENST00000264723 TRAV12-3A0A0B4J271 114 aa15.48■□□□□ 0.07
CSPG5-201ENST00000264723 KIR2DL4Q99706 377 aa15.48■□□□□ 0.07
CSPG5-201ENST00000264723 MLST8Q9BVC4 326 aa15.48■□□□□ 0.07
CSPG5-201ENST00000264723 RAX2Q96IS3 184 aa15.48■□□□□ 0.07
CSPG5-201ENST00000264723 MTURNQ8N3F0 131 aa15.47■□□□□ 0.07
CSPG5-201ENST00000264723 A0A1B0GXF2 115 aa15.47■□□□□ 0.07
CSPG5-201ENST00000264723 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.47■□□□□ 0.07
CSPG5-201ENST00000264723 SPATA12Q7Z6I5 190 aa15.47■□□□□ 0.07
CSPG5-201ENST00000264723 NXT2Q9NPJ8 142 aaKnown RBP15.47■□□□□ 0.07
CSPG5-201ENST00000264723 J3QR89 54 aa15.47■□□□□ 0.07
CSPG5-201ENST00000264723 IGKCP01834 107 aa15.47■□□□□ 0.07
CSPG5-201ENST00000264723 GAGE1Q13065 139 aa15.47■□□□□ 0.07
CSPG5-201ENST00000264723 FBXL19-AS1Q494R0 122 aa15.46■□□□□ 0.07
CSPG5-201ENST00000264723 OR1N2Q8NGR9 330 aa15.46■□□□□ 0.07
CSPG5-201ENST00000264723 DUX3Q96PT4 197 aa15.46■□□□□ 0.07
CSPG5-201ENST00000264723 DPM2O94777 84 aa15.46■□□□□ 0.07
CSPG5-201ENST00000264723 PDE6HQ13956 83 aa15.46■□□□□ 0.07
CSPG5-201ENST00000264723 TMEM170BQ5T4T1 132 aa15.46■□□□□ 0.07
CSPG5-201ENST00000264723 CENPVL3A0A0U1RRI6 287 aa15.46■□□□□ 0.06
CSPG5-201ENST00000264723 APOMO95445 188 aa15.46■□□□□ 0.06
CSPG5-201ENST00000264723 LINC01356Q8N9X3 169 aa15.45■□□□□ 0.06
CSPG5-201ENST00000264723 ATP5LO75964 103 aa15.45■□□□□ 0.06
CSPG5-201ENST00000264723 DMXL2Q8TDJ6 3036 aa15.45■□□□□ 0.06
CSPG5-201ENST00000264723 CTRLP40313 264 aa15.45■□□□□ 0.06
CSPG5-201ENST00000264723 HERVK_113P61574 105 aa15.45■□□□□ 0.06
CSPG5-201ENST00000264723 PPBPP02775 128 aa15.44■□□□□ 0.06
CSPG5-201ENST00000264723 CTSGP08311 255 aa15.44■□□□□ 0.06
CSPG5-201ENST00000264723 CD5LO43866 347 aa15.44■□□□□ 0.06
CSPG5-201ENST00000264723 DSCR9P59020 149 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms