RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PRB3Q04118 309 aaPredicted RBP9.57□□□□□ -0.88
CHMP2B-201ENST00000263780 SPANXN1Q5VSR9 72 aa9.57□□□□□ -0.88
CHMP2B-201ENST00000263780 MORN3Q6PF18 240 aaPredicted RBP9.57□□□□□ -0.88
CHMP2B-201ENST00000263780 SMIM2Q9BVW6 85 aa9.57□□□□□ -0.88
CHMP2B-201ENST00000263780 ONECUT1Q9UBC0 465 aa9.57□□□□□ -0.88
CHMP2B-201ENST00000263780 B9A039 149 aa9.56□□□□□ -0.88
CHMP2B-201ENST00000263780 SPINK8P0C7L1 97 aa9.56□□□□□ -0.88
CHMP2B-201ENST00000263780 INSL3P51460 131 aa9.56□□□□□ -0.88
CHMP2B-201ENST00000263780 HES1Q14469 280 aa9.56□□□□□ -0.88
CHMP2B-201ENST00000263780 TMEM78Q5T7P6 136 aa9.56□□□□□ -0.88
CHMP2B-201ENST00000263780 IGFL4Q6B9Z1 124 aa9.56□□□□□ -0.88
CHMP2B-201ENST00000263780 TOMM6Q96B49 74 aa9.56□□□□□ -0.88
CHMP2B-201ENST00000263780 MRPL53Q96EL3 112 aaKnown RBP9.56□□□□□ -0.88
CHMP2B-201ENST00000263780 TRGV3P03979 118 aa9.56□□□□□ -0.88
CHMP2B-201ENST00000263780 LGALS1P09382 135 aaKnown RBP9.56□□□□□ -0.88
CHMP2B-201ENST00000263780 PPDPFLQ8WWR9 84 aa9.56□□□□□ -0.88
CHMP2B-201ENST00000263780 C20orf78Q9BR46 151 aa9.56□□□□□ -0.88
CHMP2B-201ENST00000263780 TRAV26-1A0A087WT03 109 aa9.55□□□□□ -0.88
CHMP2B-201ENST00000263780 EFNA4P52798 201 aa9.55□□□□□ -0.88
CHMP2B-201ENST00000263780 TRBV20-1A0A075B6N2 111 aa9.55□□□□□ -0.88
CHMP2B-201ENST00000263780 A0A0G2JNJ9 132 aa9.55□□□□□ -0.88
CHMP2B-201ENST00000263780 SPAARA0A1B0GVQ0 90 aa9.55□□□□□ -0.88
CHMP2B-201ENST00000263780 E7EQL1 145 aa9.55□□□□□ -0.88
CHMP2B-201ENST00000263780 SRSF9Q13242 221 aaKnown RBP eCLIP9.55□□□□□ -0.88
CHMP2B-201ENST00000263780 NEXN-AS1Q8NBZ9 246 aa9.55□□□□□ -0.88
CHMP2B-201ENST00000263780 Q9UFV3 132 aa9.55□□□□□ -0.88
CHMP2B-201ENST00000263780 ZDBF2Q9HCK1 2354 aa9.54□□□□□ -0.88
CHMP2B-201ENST00000263780 SCGB1D4Q6XE38 83 aa9.54□□□□□ -0.88
CHMP2B-201ENST00000263780 CDIP1Q9H305 208 aa9.54□□□□□ -0.88
CHMP2B-201ENST00000263780 IGHV7-4-1A0A0J9YVY3 117 aa9.54□□□□□ -0.88
CHMP2B-201ENST00000263780 PRAC2D3DTV9 90 aa9.54□□□□□ -0.88
CHMP2B-201ENST00000263780 PSMB2P49721 201 aa9.54□□□□□ -0.88
CHMP2B-201ENST00000263780 UBE2D1P51668 147 aa9.54□□□□□ -0.88
CHMP2B-201ENST00000263780 Q5PR19 223 aa9.54□□□□□ -0.88
CHMP2B-201ENST00000263780 LY6G5BQ8NDX9 201 aa9.54□□□□□ -0.88
CHMP2B-201ENST00000263780 AGPAT4-IT1Q9H0P7 198 aa9.54□□□□□ -0.88
CHMP2B-201ENST00000263780 LINC01549A6NIU2 74 aa9.53□□□□□ -0.88
CHMP2B-201ENST00000263780 ZNF815PA8K554 130 aa9.53□□□□□ -0.88
CHMP2B-201ENST00000263780 PAPPA-AS1Q5QFB9 102 aa9.53□□□□□ -0.88
CHMP2B-201ENST00000263780 PRADC1Q9BSG0 188 aa9.53□□□□□ -0.88
CHMP2B-201ENST00000263780 TRAV26-2A0A0B4J265 109 aa9.53□□□□□ -0.88
CHMP2B-201ENST00000263780 LOC107984156A0A0G2JMH3 177 aa9.53□□□□□ -0.88
CHMP2B-201ENST00000263780 TMEM262E9PQX1 116 aa9.53□□□□□ -0.88
CHMP2B-201ENST00000263780 PPP1R17O96001 155 aa9.53□□□□□ -0.88
CHMP2B-201ENST00000263780 IGHV3-23P01764 117 aa9.53□□□□□ -0.88
CHMP2B-201ENST00000263780 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.53□□□□□ -0.88
CHMP2B-201ENST00000263780 TEN1Q86WV5 123 aa9.53□□□□□ -0.88
CHMP2B-201ENST00000263780 ARL17AQ8IVW1 177 aa9.53□□□□□ -0.88
CHMP2B-201ENST00000263780 PRRC2CQ9Y520 2896 aaKnown RBP9.52□□□□□ -0.88
CHMP2B-201ENST00000263780 BUB3O43684 328 aa9.52□□□□□ -0.89
CHMP2B-201ENST00000263780 UBE2D3P61077 147 aa9.52□□□□□ -0.89
CHMP2B-201ENST00000263780 HERVK_113P61574 105 aa9.52□□□□□ -0.89
CHMP2B-201ENST00000263780 SUMO2P61956 95 aaKnown RBP9.52□□□□□ -0.89
CHMP2B-201ENST00000263780 UBE2D2P62837 147 aa9.52□□□□□ -0.89
CHMP2B-201ENST00000263780 C11orf21Q9P2W6 132 aa9.52□□□□□ -0.89
CHMP2B-201ENST00000263780 COL6A3P12111 3177 aa9.52□□□□□ -0.89
CHMP2B-201ENST00000263780 SMCPP49901 116 aaPredicted RBP9.52□□□□□ -0.89
CHMP2B-201ENST00000263780 IGF2-ASQ6U949 168 aa9.52□□□□□ -0.89
CHMP2B-201ENST00000263780 Q6ZUT4 128 aa9.52□□□□□ -0.89
CHMP2B-201ENST00000263780 OOSP1A8MZH6 123 aa9.51□□□□□ -0.89
CHMP2B-201ENST00000263780 M0R1W7 72 aa9.51□□□□□ -0.89
CHMP2B-201ENST00000263780 TSPAN13O95857 204 aa9.51□□□□□ -0.89
CHMP2B-201ENST00000263780 C9orf47Q6ZRZ4 202 aa9.51□□□□□ -0.89
CHMP2B-201ENST00000263780 LENEPQ9Y5L5 61 aa9.51□□□□□ -0.89
CHMP2B-201ENST00000263780 GPR179Q6PRD1 2367 aa9.51□□□□□ -0.89
CHMP2B-201ENST00000263780 DSPP15924 2871 aaKnown RBP9.51□□□□□ -0.89
CHMP2B-201ENST00000263780 A8MWV9 139 aa9.51□□□□□ -0.89
CHMP2B-201ENST00000263780 RNF182Q8N6D2 247 aa9.51□□□□□ -0.89
CHMP2B-201ENST00000263780 AGRNO00468 2067 aa9.5□□□□□ -0.89
CHMP2B-201ENST00000263780 CENPVL3A0A0U1RRI6 287 aa9.5□□□□□ -0.89
CHMP2B-201ENST00000263780 M0R381 172 aa9.5□□□□□ -0.89
CHMP2B-201ENST00000263780 PIP4P1Q86T03 277 aa9.5□□□□□ -0.89
CHMP2B-201ENST00000263780 NFE4Q86UQ8 179 aa9.5□□□□□ -0.89
CHMP2B-201ENST00000263780 PRSS29PA6NIE9 313 aa9.5□□□□□ -0.89
CHMP2B-201ENST00000263780 CD3EP07766 207 aa9.5□□□□□ -0.89
CHMP2B-201ENST00000263780 C2orf66Q6UXQ4 117 aa9.5□□□□□ -0.89
CHMP2B-201ENST00000263780 BAALCQ8WXS3 180 aa9.5□□□□□ -0.89
CHMP2B-201ENST00000263780 VKORC1Q9BQB6 163 aa9.5□□□□□ -0.89
CHMP2B-201ENST00000263780 ODF3BA8MYP8 253 aa9.49□□□□□ -0.89
CHMP2B-201ENST00000263780 MT-ATP8P03928 68 aa9.49□□□□□ -0.89
CHMP2B-201ENST00000263780 NDPQ00604 133 aa9.49□□□□□ -0.89
CHMP2B-201ENST00000263780 SBSPONQ8IVN8 264 aa9.49□□□□□ -0.89
CHMP2B-201ENST00000263780 KLK15Q9H2R5 256 aa9.49□□□□□ -0.89
CHMP2B-201ENST00000263780 DPH3P1Q9H4G8 78 aa9.49□□□□□ -0.89
CHMP2B-201ENST00000263780 ERG28Q9UKR5 140 aa9.49□□□□□ -0.89
CHMP2B-201ENST00000263780 ZGRF1Q86YA3 2104 aa9.49□□□□□ -0.89
CHMP2B-201ENST00000263780 ZNF688P0C7X2 276 aa9.49□□□□□ -0.89
CHMP2B-201ENST00000263780 PRTN3P24158 256 aa9.49□□□□□ -0.89
CHMP2B-201ENST00000263780 ZFAND3Q9H8U3 227 aa9.49□□□□□ -0.89
CHMP2B-201ENST00000263780 LYNX1G3V0Z9 82 aa9.48□□□□□ -0.89
CHMP2B-201ENST00000263780 H3BVH4 76 aa9.48□□□□□ -0.89
CHMP2B-201ENST00000263780 CD7P09564 240 aa9.48□□□□□ -0.89
CHMP2B-201ENST00000263780 LYNX1P0DP58 116 aa9.48□□□□□ -0.89
CHMP2B-201ENST00000263780 COX6B1P14854 86 aa9.48□□□□□ -0.89
CHMP2B-201ENST00000263780 FAM110DQ8TAY7 271 aaPredicted RBP9.48□□□□□ -0.89
CHMP2B-201ENST00000263780 METTL26Q96S19 204 aa9.48□□□□□ -0.89
CHMP2B-201ENST00000263780 IGHV1-69DA0A0B4J2H0 117 aa9.48□□□□□ -0.89
CHMP2B-201ENST00000263780 EBI3Q14213 229 aa9.48□□□□□ -0.89
CHMP2B-201ENST00000263780 NDUFA11Q86Y39 141 aa9.48□□□□□ -0.89
CHMP2B-201ENST00000263780 Q8N6K4 173 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms