RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 SHANK2-AS3Q9BTD1 123 aa10.32□□□□□ -0.76
TTC39A-202ENST00000262676 DAZ1Q9NQZ3 744 aaKnown RBP10.32□□□□□ -0.76
TTC39A-202ENST00000262676 CYYR1Q96J86 154 aa10.31□□□□□ -0.76
TTC39A-202ENST00000262676 MRPL35Q9NZE8 188 aaKnown RBP10.31□□□□□ -0.76
TTC39A-202ENST00000262676 NOTCH2Q04721 2471 aa10.31□□□□□ -0.76
TTC39A-202ENST00000262676 SDHAF1A6NFY7 115 aa10.31□□□□□ -0.76
TTC39A-202ENST00000262676 LINC01619G3V211 115 aa10.31□□□□□ -0.76
TTC39A-202ENST00000262676 IGKV1-39P01597 117 aa10.31□□□□□ -0.76
TTC39A-202ENST00000262676 IGKV1D-39P04432 117 aa10.31□□□□□ -0.76
TTC39A-202ENST00000262676 GAFA1Q96PS6 74 aa10.31□□□□□ -0.76
TTC39A-202ENST00000262676 ZNF581Q9P0T4 197 aa10.31□□□□□ -0.76
TTC39A-202ENST00000262676 A0A0G2JRQ6 117 aa10.31□□□□□ -0.76
TTC39A-202ENST00000262676 SAA4P35542 130 aa10.31□□□□□ -0.76
TTC39A-202ENST00000262676 HLA-DMBP28068 263 aa10.3□□□□□ -0.76
TTC39A-202ENST00000262676 C8orf31Q8N9H6 132 aa10.3□□□□□ -0.76
TTC39A-202ENST00000262676 SRRM5B3KS81 715 aa10.3□□□□□ -0.76
TTC39A-202ENST00000262676 PFN1P07737 140 aaKnown RBP10.3□□□□□ -0.76
TTC39A-202ENST00000262676 VWC2Q2TAL6 325 aa10.3□□□□□ -0.76
TTC39A-202ENST00000262676 M0R1W7 72 aa10.3□□□□□ -0.76
TTC39A-202ENST00000262676 CFHR4Q92496 578 aa10.3□□□□□ -0.76
TTC39A-202ENST00000262676 ORMDL1Q9P0S3 153 aa10.3□□□□□ -0.76
TTC39A-202ENST00000262676 CACNA1DQ01668 2161 aa10.3□□□□□ -0.76
TTC39A-202ENST00000262676 IGKV3D-7A0A0C4DH55 119 aa10.3□□□□□ -0.76
TTC39A-202ENST00000262676 ANGP03950 147 aaKnown RBP10.3□□□□□ -0.76
TTC39A-202ENST00000262676 HIST2H2BCQ6DN03 193 aa10.3□□□□□ -0.76
TTC39A-202ENST00000262676 VWA8A3KMH1 1905 aa10.29□□□□□ -0.76
TTC39A-202ENST00000262676 NYNRINQ9P2P1 1898 aaKnown RBP10.29□□□□□ -0.76
TTC39A-202ENST00000262676 C12orf74Q32Q52 190 aa10.29□□□□□ -0.76
TTC39A-202ENST00000262676 ZNRD1Q9P1U0 126 aa10.29□□□□□ -0.76
TTC39A-202ENST00000262676 NDUFS7O75251 213 aa10.29□□□□□ -0.76
TTC39A-202ENST00000262676 LYPD3O95274 346 aa10.29□□□□□ -0.76
TTC39A-202ENST00000262676 DOCK4Q8N1I0 1966 aa10.29□□□□□ -0.76
TTC39A-202ENST00000262676 RNF144BQ7Z419 303 aa10.29□□□□□ -0.76
TTC39A-202ENST00000262676 RNF5Q99942 180 aa10.29□□□□□ -0.76
TTC39A-202ENST00000262676 GATA3P23771 443 aa10.29□□□□□ -0.76
TTC39A-202ENST00000262676 OOSP1A8MZH6 123 aa10.28□□□□□ -0.76
TTC39A-202ENST00000262676 F6UB75 175 aa10.28□□□□□ -0.76
TTC39A-202ENST00000262676 CCL25O15444 150 aa10.28□□□□□ -0.76
TTC39A-202ENST00000262676 IGF2BP2-AS1Q96M15 143 aa10.28□□□□□ -0.76
TTC39A-202ENST00000262676 SIGLEC8Q9NYZ4 499 aa10.28□□□□□ -0.76
TTC39A-202ENST00000262676 MRPL23Q16540 153 aaKnown RBP10.28□□□□□ -0.76
TTC39A-202ENST00000262676 ZNF492Q9P255 531 aa10.28□□□□□ -0.76
TTC39A-202ENST00000262676 J3QQQ9 107 aa10.28□□□□□ -0.76
TTC39A-202ENST00000262676 BRK1Q8WUW1 75 aa10.28□□□□□ -0.76
TTC39A-202ENST00000262676 OTOGLQ3ZCN5 2332 aa10.28□□□□□ -0.76
TTC39A-202ENST00000262676 LGALS9BQ3B8N2 356 aa10.28□□□□□ -0.76
TTC39A-202ENST00000262676 LGALS9CQ6DKI2 356 aa10.28□□□□□ -0.76
TTC39A-202ENST00000262676 C5orf63A6NC05 138 aa10.28□□□□□ -0.76
TTC39A-202ENST00000262676 DKK2Q9UBU2 259 aa10.28□□□□□ -0.76
TTC39A-202ENST00000262676 KLF2Q9Y5W3 355 aaPredicted RBP10.28□□□□□ -0.76
TTC39A-202ENST00000262676 SPATA25Q9BR10 227 aa10.27□□□□□ -0.76
TTC39A-202ENST00000262676 IGHV1OR15-1A0A075B7D0 117 aa10.27□□□□□ -0.77
TTC39A-202ENST00000262676 IGKV1-16P04430 117 aa10.27□□□□□ -0.77
TTC39A-202ENST00000262676 XCL1P47992 114 aa10.27□□□□□ -0.77
TTC39A-202ENST00000262676 WIPF2Q8TF74 440 aaPredicted RBP10.27□□□□□ -0.77
TTC39A-202ENST00000262676 IGKV1OR2-108A0A075B7D4 117 aa10.27□□□□□ -0.77
TTC39A-202ENST00000262676 IGLV3-32A0A0A0MS00 114 aa10.27□□□□□ -0.77
TTC39A-202ENST00000262676 Q6ZVH6 145 aa10.27□□□□□ -0.77
TTC39A-202ENST00000262676 PKIGQ9Y2B9 76 aa10.27□□□□□ -0.77
TTC39A-202ENST00000262676 C9JQL5 133 aa10.27□□□□□ -0.77
TTC39A-202ENST00000262676 RPL18AQ02543 176 aaKnown RBP10.26□□□□□ -0.77
TTC39A-202ENST00000262676 ZGRF1Q86YA3 2104 aa10.26□□□□□ -0.77
TTC39A-202ENST00000262676 A0A1B0GX51 115 aa10.26□□□□□ -0.77
TTC39A-202ENST00000262676 HERVK_113P63121 156 aa10.26□□□□□ -0.77
TTC39A-202ENST00000262676 MST1LQ2TV78 715 aa10.26□□□□□ -0.77
TTC39A-202ENST00000262676 ZNF407Q9C0G0 2248 aa10.26□□□□□ -0.77
TTC39A-202ENST00000262676 Q6P435 159 aa10.26□□□□□ -0.77
TTC39A-202ENST00000262676 NPYP01303 97 aa10.26□□□□□ -0.77
TTC39A-202ENST00000262676 DEFB113Q30KQ7 82 aa10.26□□□□□ -0.77
TTC39A-202ENST00000262676 PCNX2A6NKB5 2137 aa10.25□□□□□ -0.77
TTC39A-202ENST00000262676 PDE6HQ13956 83 aa10.25□□□□□ -0.77
TTC39A-202ENST00000262676 TEX36Q5VZQ5 186 aa10.25□□□□□ -0.77
TTC39A-202ENST00000262676 SPANXCQ9NY87 97 aa10.25□□□□□ -0.77
TTC39A-202ENST00000262676 IGKV2D-24A0A075B6R9 120 aa10.25□□□□□ -0.77
TTC39A-202ENST00000262676 ATP6V0E1O15342 81 aa10.25□□□□□ -0.77
TTC39A-202ENST00000262676 Q6ZRM9 215 aa10.25□□□□□ -0.77
TTC39A-202ENST00000262676 LMO1P25800 156 aa10.25□□□□□ -0.77
TTC39A-202ENST00000262676 PSMB8P28062 276 aa10.25□□□□□ -0.77
TTC39A-202ENST00000262676 C4orf48Q5BLP8 95 aa10.25□□□□□ -0.77
TTC39A-202ENST00000262676 SH2D6Q7Z4S9 175 aa10.25□□□□□ -0.77
TTC39A-202ENST00000262676 DOCK10Q96BY6 2186 aa10.25□□□□□ -0.77
TTC39A-202ENST00000262676 IGHV2-70P01814 119 aa10.25□□□□□ -0.77
TTC39A-202ENST00000262676 ABCA1O95477 2261 aa10.25□□□□□ -0.77
TTC39A-202ENST00000262676 IGKV1D-17A0A075B6S4 117 aa10.24□□□□□ -0.77
TTC39A-202ENST00000262676 Q6ZQT7 251 aa10.24□□□□□ -0.77
TTC39A-202ENST00000262676 SPTSSBQ8NFR3 76 aa10.24□□□□□ -0.77
TTC39A-202ENST00000262676 IGFL3Q6UXB1 125 aa10.24□□□□□ -0.77
TTC39A-202ENST00000262676 C8orf86Q6ZUL3 223 aa10.24□□□□□ -0.77
TTC39A-202ENST00000262676 TIMM17AQ99595 171 aa10.24□□□□□ -0.77
TTC39A-202ENST00000262676 SMIM27A0A1W2PRY6 76 aa10.24□□□□□ -0.77
TTC39A-202ENST00000262676 GBF1Q92538 1859 aa10.24□□□□□ -0.77
TTC39A-202ENST00000262676 CFC1BP0CG36 223 aa10.24□□□□□ -0.77
TTC39A-202ENST00000262676 CFC1P0CG37 223 aa10.24□□□□□ -0.77
TTC39A-202ENST00000262676 MP68P56378 58 aa10.24□□□□□ -0.77
TTC39A-202ENST00000262676 NDUFB8O95169 186 aa10.23□□□□□ -0.77
TTC39A-202ENST00000262676 F8VRH5 84 aa10.23□□□□□ -0.77
TTC39A-202ENST00000262676 FRMPD3Q5JV73 1810 aa10.23□□□□□ -0.77
TTC39A-202ENST00000262676 KIAA1671Q9BY89 1806 aa10.23□□□□□ -0.77
TTC39A-202ENST00000262676 A0A0J9YY99 117 aa10.23□□□□□ -0.77
TTC39A-202ENST00000262676 COX7B2Q8TF08 81 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms