RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 RNASE4P34096 147 aaKnown RBP12.05□□□□□ -0.48
CHCHD3-201ENST00000262570 UBE2G1P62253 170 aa12.05□□□□□ -0.48
CHCHD3-201ENST00000262570 BTN1A1Q13410 526 aa12.05□□□□□ -0.48
CHCHD3-201ENST00000262570 TOR2AQ5JU69 321 aa12.05□□□□□ -0.48
CHCHD3-201ENST00000262570 SAPCD1Q5SSQ6 148 aa12.05□□□□□ -0.48
CHCHD3-201ENST00000262570 NDFIP1Q9BT67 221 aa12.05□□□□□ -0.48
CHCHD3-201ENST00000262570 IGHV3OR16-12A0A075B7B8 117 aa12.04□□□□□ -0.48
CHCHD3-201ENST00000262570 TRAV12-3A0A0B4J271 114 aa12.04□□□□□ -0.48
CHCHD3-201ENST00000262570 ZNF324O75467 553 aaPredicted RBP12.04□□□□□ -0.48
CHCHD3-201ENST00000262570 S100A9P06702 114 aaKnown RBP12.04□□□□□ -0.48
CHCHD3-201ENST00000262570 Q86TA4 180 aa12.04□□□□□ -0.48
CHCHD3-201ENST00000262570 NEU1Q99519 415 aa12.04□□□□□ -0.48
CHCHD3-201ENST00000262570 TMEM208Q9BTX3 173 aa12.04□□□□□ -0.48
CHCHD3-201ENST00000262570 EIF5A2Q9GZV4 153 aaKnown RBP12.04□□□□□ -0.48
CHCHD3-201ENST00000262570 LTAP01374 205 aa12.03□□□□□ -0.48
CHCHD3-201ENST00000262570 CLLU1Q5K131 121 aa12.03□□□□□ -0.48
CHCHD3-201ENST00000262570 TMEM256Q8N2U0 113 aa12.03□□□□□ -0.48
CHCHD3-201ENST00000262570 C8orf49Q96NF6 230 aa12.03□□□□□ -0.48
CHCHD3-201ENST00000262570 ZFP30Q9Y2G7 519 aa12.03□□□□□ -0.48
CHCHD3-201ENST00000262570 H7BYZ3 331 aa12.02□□□□□ -0.49
CHCHD3-201ENST00000262570 NDUFS6O75380 124 aaKnown RBP12.02□□□□□ -0.49
CHCHD3-201ENST00000262570 RPL35P42766 123 aaKnown RBP12.02□□□□□ -0.49
CHCHD3-201ENST00000262570 Q6AWC8 147 aa12.02□□□□□ -0.49
CHCHD3-201ENST00000262570 LINC01587Q99440 93 aa12.02□□□□□ -0.49
CHCHD3-201ENST00000262570 NIPSNAP3BQ9BS92 247 aa12.02□□□□□ -0.49
CHCHD3-201ENST00000262570 DERL1Q9BUN8 251 aa12.02□□□□□ -0.49
CHCHD3-201ENST00000262570 MED9Q9NWA0 146 aa12.02□□□□□ -0.49
CHCHD3-201ENST00000262570 U3KQK5 164 aa12.02□□□□□ -0.49
CHCHD3-201ENST00000262570 STAB2Q8WWQ8 2551 aa12.02□□□□□ -0.49
CHCHD3-201ENST00000262570 TMEM250H0YL14 139 aa12.01□□□□□ -0.49
CHCHD3-201ENST00000262570 TAS2R60P59551 318 aa12.01□□□□□ -0.49
CHCHD3-201ENST00000262570 Q6ZQT7 251 aa12.01□□□□□ -0.49
CHCHD3-201ENST00000262570 COX8CQ7Z4L0 72 aa12.01□□□□□ -0.49
CHCHD3-201ENST00000262570 SMIM9A6NGZ8 99 aa12.01□□□□□ -0.49
CHCHD3-201ENST00000262570 RGS13O14921 159 aa12.01□□□□□ -0.49
CHCHD3-201ENST00000262570 MIFP14174 115 aa12.01□□□□□ -0.49
CHCHD3-201ENST00000262570 SMUG1Q53HV7 270 aa12.01□□□□□ -0.49
CHCHD3-201ENST00000262570 Q8NAQ8 132 aa12.01□□□□□ -0.49
CHCHD3-201ENST00000262570 GCGP01275 180 aa12□□□□□ -0.49
CHCHD3-201ENST00000262570 ZNF80P51504 273 aaPredicted RBP12□□□□□ -0.49
CHCHD3-201ENST00000262570 PYGO2Q9BRQ0 406 aa12□□□□□ -0.49
CHCHD3-201ENST00000262570 PRM2P04554 102 aa11.99□□□□□ -0.49
CHCHD3-201ENST00000262570 RRN3P1Q2M238 152 aa11.99□□□□□ -0.49
CHCHD3-201ENST00000262570 BAGE2Q86Y30 109 aa11.99□□□□□ -0.49
CHCHD3-201ENST00000262570 TMEM183AQ8IXX5 376 aa11.99□□□□□ -0.49
CHCHD3-201ENST00000262570 MLST8Q9BVC4 326 aa11.99□□□□□ -0.49
CHCHD3-201ENST00000262570 TRAV21A0A0B4J279 112 aa11.98□□□□□ -0.49
CHCHD3-201ENST00000262570 IGHV4-28A0A0C4DH34 117 aa11.98□□□□□ -0.49
CHCHD3-201ENST00000262570 ZNF705GA8MUZ8 300 aaPredicted RBP11.98□□□□□ -0.49
CHCHD3-201ENST00000262570 PFN1P07737 140 aaKnown RBP11.98□□□□□ -0.49
CHCHD3-201ENST00000262570 SRP19P09132 144 aaKnown RBP11.98□□□□□ -0.49
CHCHD3-201ENST00000262570 SRSF3P84103 164 aaKnown RBP11.98□□□□□ -0.49
CHCHD3-201ENST00000262570 ZC2HC1AQ96GY0 325 aa11.98□□□□□ -0.49
CHCHD3-201ENST00000262570 LINC00467Q9BRT7 94 aa11.98□□□□□ -0.49
CHCHD3-201ENST00000262570 SMDT1Q9H4I9 107 aa11.98□□□□□ -0.49
CHCHD3-201ENST00000262570 TRBV20OR9-2A0A075B6H5 130 aa11.97□□□□□ -0.49
CHCHD3-201ENST00000262570 RAB19A4D1S5 217 aa11.97□□□□□ -0.49
CHCHD3-201ENST00000262570 HTN1P15515 57 aa11.97□□□□□ -0.49
CHCHD3-201ENST00000262570 NHLRC2Q8NBF2 726 aa11.97□□□□□ -0.49
CHCHD3-201ENST00000262570 C11orf68Q9H3H3 251 aaKnown RBP11.97□□□□□ -0.49
CHCHD3-201ENST00000262570 A0A0J9YWU9 116 aa11.96□□□□□ -0.49
CHCHD3-201ENST00000262570 AZU1P20160 251 aa11.96□□□□□ -0.49
CHCHD3-201ENST00000262570 CRIP1P50238 77 aa11.96□□□□□ -0.49
CHCHD3-201ENST00000262570 PEA15Q15121 130 aa11.96□□□□□ -0.49
CHCHD3-201ENST00000262570 CENPWQ5EE01 88 aa11.96□□□□□ -0.49
CHCHD3-201ENST00000262570 PARLQ9H300 379 aa11.96□□□□□ -0.49
CHCHD3-201ENST00000262570 IGHV1OR15-1A0A075B7D0 117 aa11.96□□□□□ -0.5
CHCHD3-201ENST00000262570 C9JQL5 133 aa11.96□□□□□ -0.5
CHCHD3-201ENST00000262570 DEFB4AO15263 64 aa11.96□□□□□ -0.5
CHCHD3-201ENST00000262570 EIF4E3Q8N5X7 224 aaKnown RBP11.96□□□□□ -0.5
CHCHD3-201ENST00000262570 EDA2RQ9HAV5 297 aa11.96□□□□□ -0.5
CHCHD3-201ENST00000262570 FABP5P3A8MUU1 101 aa11.95□□□□□ -0.5
CHCHD3-201ENST00000262570 IGLV2-8P01709 118 aa11.95□□□□□ -0.5
CHCHD3-201ENST00000262570 GNG4P50150 75 aa11.95□□□□□ -0.5
CHCHD3-201ENST00000262570 ZNF674Q2M3X9 581 aa11.95□□□□□ -0.5
CHCHD3-201ENST00000262570 TDRG1Q3Y452 100 aa11.95□□□□□ -0.5
CHCHD3-201ENST00000262570 ANXA2RQ3ZCQ2 193 aa11.95□□□□□ -0.5
CHCHD3-201ENST00000262570 MUC21Q5SSG8 566 aa11.95□□□□□ -0.5
CHCHD3-201ENST00000262570 FAM159AQ6UWV7 190 aa11.95□□□□□ -0.5
CHCHD3-201ENST00000262570 RNASE8Q8TDE3 154 aaKnown RBP11.95□□□□□ -0.5
CHCHD3-201ENST00000262570 SMIM12Q96EX1 92 aa11.95□□□□□ -0.5
CHCHD3-201ENST00000262570 TMEM189A5PLL7 270 aa11.94□□□□□ -0.5
CHCHD3-201ENST00000262570 C9JCJ5 164 aa11.94□□□□□ -0.5
CHCHD3-201ENST00000262570 CEBPGP53567 150 aa11.94□□□□□ -0.5
CHCHD3-201ENST00000262570 ZNF493Q6ZR52 646 aa11.94□□□□□ -0.5
CHCHD3-201ENST00000262570 TMEM263Q8WUH6 116 aaKnown RBP11.94□□□□□ -0.5
CHCHD3-201ENST00000262570 C11orf21Q9P2W6 132 aa11.94□□□□□ -0.5
CHCHD3-201ENST00000262570 PLAC8L1A1L4L8 177 aa11.93□□□□□ -0.5
CHCHD3-201ENST00000262570 CBY3A6NI87 242 aa11.93□□□□□ -0.5
CHCHD3-201ENST00000262570 FAM162BQ5T6X4 162 aa11.93□□□□□ -0.5
CHCHD3-201ENST00000262570 C16orf74Q96GX8 76 aa11.93□□□□□ -0.5
CHCHD3-201ENST00000262570 NAGKQ9UJ70 344 aa11.93□□□□□ -0.5
CHCHD3-201ENST00000262570 TP53TG3Q9ULZ0 132 aa11.93□□□□□ -0.5
CHCHD3-201ENST00000262570 PGPEP1LA6NFU8 196 aa11.92□□□□□ -0.5
CHCHD3-201ENST00000262570 SH2D1AO60880 128 aa11.92□□□□□ -0.5
CHCHD3-201ENST00000262570 EMP1P54849 157 aa11.92□□□□□ -0.5
CHCHD3-201ENST00000262570 KCNS1Q96KK3 526 aa11.92□□□□□ -0.5
CHCHD3-201ENST00000262570 SMIM7Q9BQ49 75 aa11.92□□□□□ -0.5
CHCHD3-201ENST00000262570 C11orf72Q8NBR9 251 aa11.91□□□□□ -0.5
CHCHD3-201ENST00000262570 OCC1Q8TAD7 63 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms