RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 RIGQ13278 110 aa20.94■□□□□ 0.94
CCM2-201ENST00000258781 NIPBLQ6KC79 2804 aaeCLIP20.93■□□□□ 0.941e-6■■■■■ 35.4
CCM2-201ENST00000258781 BAGE3Q86Y29 109 aa20.93■□□□□ 0.94
CCM2-201ENST00000258781 TEP1Q99973 2627 aaKnown RBP20.93■□□□□ 0.94
CCM2-201ENST00000258781 MAST4O15021 2626 aa20.92■□□□□ 0.94
CCM2-201ENST00000258781 CRLF1O75462 422 aa20.92■□□□□ 0.94
CCM2-201ENST00000258781 EDN2P20800 178 aa20.92■□□□□ 0.94
CCM2-201ENST00000258781 SSBP4Q9BWG4 385 aaPredicted RBP20.92■□□□□ 0.94
CCM2-201ENST00000258781 HOXD3P31249 432 aaPredicted RBP20.92■□□□□ 0.94
CCM2-201ENST00000258781 BORCS7Q96B45 105 aa20.92■□□□□ 0.94
CCM2-201ENST00000258781 LINC00477Q96M19 166 aa20.92■□□□□ 0.94
CCM2-201ENST00000258781 HIST1H1AQ02539 215 aaPredicted RBP20.91■□□□□ 0.94
CCM2-201ENST00000258781 GATD1Q8NB37 220 aa20.91■□□□□ 0.94
CCM2-201ENST00000258781 OR10J6PQ8NGY7 276 aa20.91■□□□□ 0.94
CCM2-201ENST00000258781 ARMS2P0C7Q2 107 aa20.9■□□□□ 0.94
CCM2-201ENST00000258781 SYNJ2BPP57105 145 aa20.9■□□□□ 0.94
CCM2-201ENST00000258781 LINC00310P59036 64 aa20.9■□□□□ 0.94
CCM2-201ENST00000258781 PYY3Q5JQD4 70 aa20.9■□□□□ 0.94
CCM2-201ENST00000258781 TMSB15BA0A087X1C1 80 aa20.9■□□□□ 0.94
CCM2-201ENST00000258781 NUPR1O60356 82 aa20.9■□□□□ 0.94
CCM2-201ENST00000258781 SERF1AO75920 110 aa20.9■□□□□ 0.94
CCM2-201ENST00000258781 LINC01559Q495D7 138 aa20.9■□□□□ 0.94
CCM2-201ENST00000258781 ID1P41134 155 aa20.89■□□□□ 0.93
CCM2-201ENST00000258781 C4orf3Q8WVX3 66 aa20.88■□□□□ 0.93
CCM2-201ENST00000258781 KLF5Q13887 457 aaPredicted RBP20.88■□□□□ 0.93
CCM2-201ENST00000258781 DCANP1Q8TF63 244 aa20.88■□□□□ 0.93
CCM2-201ENST00000258781 JMJD8Q96S16 334 aa20.88■□□□□ 0.93
CCM2-201ENST00000258781 ALKBH7Q9BT30 221 aaPredicted RBP20.88■□□□□ 0.93
CCM2-201ENST00000258781 IGKV3-7A0A075B6H7 116 aa20.87■□□□□ 0.93
CCM2-201ENST00000258781 F2Z2F3 143 aa20.87■□□□□ 0.93
CCM2-201ENST00000258781 ORM1P02763 201 aa20.87■□□□□ 0.93
CCM2-201ENST00000258781 CTRLP40313 264 aa20.87■□□□□ 0.93
CCM2-201ENST00000258781 LYZL1Q6UWQ5 148 aa20.87■□□□□ 0.93
CCM2-201ENST00000258781 C2CD3Q4AC94 2353 aa20.86■□□□□ 0.93
CCM2-201ENST00000258781 IGLC6P0CF74 106 aa20.86■□□□□ 0.93
CCM2-201ENST00000258781 PAFAH1B2P68402 229 aa20.86■□□□□ 0.93
CCM2-201ENST00000258781 TCTEX1D4Q5JR98 221 aa20.86■□□□□ 0.93
CCM2-201ENST00000258781 TPPP3Q9BW30 176 aa20.86■□□□□ 0.93
CCM2-201ENST00000258781 FER1L6-AS1Q8NA97 138 aa20.86■□□□□ 0.93
CCM2-201ENST00000258781 OR8A1Q8NGG7 326 aa20.86■□□□□ 0.93
CCM2-201ENST00000258781 C18orf32Q8TCD1 76 aa20.86■□□□□ 0.93
CCM2-201ENST00000258781 NIT2Q9NQR4 276 aa20.86■□□□□ 0.93
CCM2-201ENST00000258781 TCF21O43680 179 aa20.85■□□□□ 0.93
CCM2-201ENST00000258781 ZNF705DP0CH99 300 aaPredicted RBP20.85■□□□□ 0.93
CCM2-201ENST00000258781 ZNF705BP0CI00 300 aaPredicted RBP20.85■□□□□ 0.93
CCM2-201ENST00000258781 C2orf70A6NJV1 201 aa20.84■□□□□ 0.93
CCM2-201ENST00000258781 LINC01619G3V211 115 aa20.84■□□□□ 0.93
CCM2-201ENST00000258781 DNLZQ5SXM8 178 aa20.84■□□□□ 0.93
CCM2-201ENST00000258781 C18orf65Q6ZTR6 163 aa20.84■□□□□ 0.93
CCM2-201ENST00000258781 ZNF575Q86XF7 245 aa20.84■□□□□ 0.93
CCM2-201ENST00000258781 LOC102724200A0A096LPH7 203 aaPredicted RBP20.84■□□□□ 0.93
CCM2-201ENST00000258781 TRBV7-9A0A0J9YWB2 115 aa20.84■□□□□ 0.93
CCM2-201ENST00000258781 WFDC12Q8WWY7 111 aa20.84■□□□□ 0.93
CCM2-201ENST00000258781 LINC01006Q8NI28 216 aa20.83■□□□□ 0.92
CCM2-201ENST00000258781 MS4A6AQ9H2W1 248 aa20.83■□□□□ 0.92
CCM2-201ENST00000258781 ZNF493Q6ZR52 646 aa20.82■□□□□ 0.92
CCM2-201ENST00000258781 FAM19A4Q96LR4 140 aa20.82■□□□□ 0.92
CCM2-201ENST00000258781 C16orf95Q9H693 158 aa20.82■□□□□ 0.92
CCM2-201ENST00000258781 SELENOKQ9Y6D0 94 aa20.82■□□□□ 0.92
CCM2-201ENST00000258781 M0QZ24 198 aa20.81■□□□□ 0.92
CCM2-201ENST00000258781 KCNS1Q96KK3 526 aa20.81■□□□□ 0.92
CCM2-201ENST00000258781 JMJD1CQ15652 2540 aa20.81■□□□□ 0.92
CCM2-201ENST00000258781 JOSD1Q15040 202 aaPredicted RBP20.81■□□□□ 0.92
CCM2-201ENST00000258781 RCHY1Q96PM5 261 aa20.81■□□□□ 0.92
CCM2-201ENST00000258781 SLURP1P55000 103 aa20.8■□□□□ 0.92
CCM2-201ENST00000258781 DEFB136Q30KP8 78 aa20.8■□□□□ 0.92
CCM2-201ENST00000258781 HIST2H2BDQ6DRA6 164 aa20.8■□□□□ 0.92
CCM2-201ENST00000258781 ZFAND2AQ8N6M9 145 aa20.8■□□□□ 0.92
CCM2-201ENST00000258781 DPF1Q92782 380 aa20.8■□□□□ 0.92
CCM2-201ENST00000258781 KHDC1LQ5JSQ8 128 aa20.79■□□□□ 0.92
CCM2-201ENST00000258781 OR1N2Q8NGR9 330 aa20.79■□□□□ 0.92
CCM2-201ENST00000258781 CNFNQ9BYD5 112 aa20.79■□□□□ 0.92
CCM2-201ENST00000258781 C11orf21Q9P2W6 132 aa20.79■□□□□ 0.92
CCM2-201ENST00000258781 IGKV3D-20A0A0C4DH25 116 aa20.79■□□□□ 0.92
CCM2-201ENST00000258781 K7EQG2 157 aa20.79■□□□□ 0.92
CCM2-201ENST00000258781 DEFB1P60022 68 aa20.79■□□□□ 0.92
CCM2-201ENST00000258781 WFDC3Q8IUB2 231 aa20.79■□□□□ 0.92
CCM2-201ENST00000258781 OR11H1Q8NG94 326 aa20.79■□□□□ 0.92
CCM2-201ENST00000258781 F6UB75 175 aa20.78■□□□□ 0.92
CCM2-201ENST00000258781 IQCJQ1A5X6 159 aa20.78■□□□□ 0.92
CCM2-201ENST00000258781 PRR9Q5T870 116 aa20.78■□□□□ 0.92
CCM2-201ENST00000258781 KLHL30-AS1Q8NEE0 82 aa20.78■□□□□ 0.92
CCM2-201ENST00000258781 PRR31Q5SQ13 230 aa20.77■□□□□ 0.92
CCM2-201ENST00000258781 APRG1Q8IVJ8 170 aa20.77■□□□□ 0.92
CCM2-201ENST00000258781 SAMD10Q9BYL1 202 aa20.77■□□□□ 0.92
CCM2-201ENST00000258781 SNRPD3P62318 126 aaKnown RBP20.77■□□□□ 0.92
CCM2-201ENST00000258781 PEMTQ9UBM1 199 aa20.77■□□□□ 0.92
CCM2-201ENST00000258781 NDUFA7O95182 113 aa20.76■□□□□ 0.91
CCM2-201ENST00000258781 GPX1P07203 203 aa20.75■□□□□ 0.91
CCM2-201ENST00000258781 ADAMTSL5Q6ZMM2 481 aa20.75■□□□□ 0.91
CCM2-201ENST00000258781 TRAV21A0A0B4J279 112 aa20.75■□□□□ 0.91
CCM2-201ENST00000258781 PCP4L1A6NKN8 68 aa20.74■□□□□ 0.91
CCM2-201ENST00000258781 ZNF324O75467 553 aaPredicted RBP20.73■□□□□ 0.91
CCM2-201ENST00000258781 TFPI2P48307 235 aa20.73■□□□□ 0.91
CCM2-201ENST00000258781 OR9G4Q8NGQ1 327 aa20.73■□□□□ 0.91
CCM2-201ENST00000258781 ZNF688P0C7X2 276 aa20.73■□□□□ 0.91
CCM2-201ENST00000258781 S100A12P80511 92 aa20.73■□□□□ 0.91
CCM2-201ENST00000258781 TWIST1Q15672 202 aa20.73■□□□□ 0.91
CCM2-201ENST00000258781 C11orf44Q8N8P7 122 aa20.73■□□□□ 0.91
CCM2-201ENST00000258781 NTF3P20783 257 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms