RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 ACTR3CQ9C0K3 210 aaPredicted RBP9.05□□□□□ -0.96
APOBEC3A-201ENST00000249116 DNAH2Q9P225 4427 aa9.04□□□□□ -0.96
APOBEC3A-201ENST00000249116 ZNF726P1Q15940 193 aa9.04□□□□□ -0.96
APOBEC3A-201ENST00000249116 CCDC28AQ8IWP9 274 aa9.04□□□□□ -0.96
APOBEC3A-201ENST00000249116 RNASE8Q8TDE3 154 aaKnown RBP9.04□□□□□ -0.96
APOBEC3A-201ENST00000249116 Q9H3A6 140 aa9.04□□□□□ -0.96
APOBEC3A-201ENST00000249116 NOP10Q9NPE3 64 aaKnown RBP9.04□□□□□ -0.96
APOBEC3A-201ENST00000249116 CTXND1A0A1B0GTU2 59 aa9.03□□□□□ -0.96
APOBEC3A-201ENST00000249116 SEC11BP0C7V7 166 aa9.03□□□□□ -0.96
APOBEC3A-201ENST00000249116 RANP62826 216 aaKnown RBP9.03□□□□□ -0.96
APOBEC3A-201ENST00000249116 EIF5AP63241 154 aaKnown RBP9.03□□□□□ -0.96
APOBEC3A-201ENST00000249116 TNP2Q05952 138 aa9.03□□□□□ -0.96
APOBEC3A-201ENST00000249116 LYPD1Q8N2G4 141 aa9.03□□□□□ -0.96
APOBEC3A-201ENST00000249116 STOML3Q8TAV4 291 aa9.03□□□□□ -0.96
APOBEC3A-201ENST00000249116 LINC00588Q9Y4M8 146 aa9.03□□□□□ -0.96
APOBEC3A-201ENST00000249116 NACAE9PAV3 2078 aa9.03□□□□□ -0.96
APOBEC3A-201ENST00000249116 C16orf90A8MZG2 172 aa9.02□□□□□ -0.97
APOBEC3A-201ENST00000249116 NPIPB6E9PJ23 425 aa9.02□□□□□ -0.97
APOBEC3A-201ENST00000249116 CXorf1O96002 111 aa9.02□□□□□ -0.97
APOBEC3A-201ENST00000249116 TPT1P13693 172 aaKnown RBP9.02□□□□□ -0.97
APOBEC3A-201ENST00000249116 GCHFRP30047 84 aa9.02□□□□□ -0.97
APOBEC3A-201ENST00000249116 OR5I1Q13606 314 aa9.02□□□□□ -0.97
APOBEC3A-201ENST00000249116 ZFP69Q49AA0 526 aa9.02□□□□□ -0.97
APOBEC3A-201ENST00000249116 SNURFLB1AK76 121 aa9.01□□□□□ -0.97
APOBEC3A-201ENST00000249116 C9orf62Q8N4C0 152 aa9.01□□□□□ -0.97
APOBEC3A-201ENST00000249116 SUN5Q8TC36 379 aa9.01□□□□□ -0.97
APOBEC3A-201ENST00000249116 OTORQ9NRC9 128 aa9.01□□□□□ -0.97
APOBEC3A-201ENST00000249116 TMEM167BQ9NRX6 74 aa9.01□□□□□ -0.97
APOBEC3A-201ENST00000249116 IGKV2-40A0A087WW87 121 aaPredicted RBP9□□□□□ -0.97
APOBEC3A-201ENST00000249116 IGKV2D-40P01614 121 aaPredicted RBP9□□□□□ -0.97
APOBEC3A-201ENST00000249116 ERCC8Q13216 396 aa9□□□□□ -0.97
APOBEC3A-201ENST00000249116 TTC32Q5I0X7 151 aa9□□□□□ -0.97
APOBEC3A-201ENST00000249116 GFI1BQ5VTD9 330 aa9□□□□□ -0.97
APOBEC3A-201ENST00000249116 TMED6Q8WW62 240 aa9□□□□□ -0.97
APOBEC3A-201ENST00000249116 ODF3Q96PU9 254 aa9□□□□□ -0.97
APOBEC3A-201ENST00000249116 Q9H8V8 135 aa9□□□□□ -0.97
APOBEC3A-201ENST00000249116 PKHD1P08F94 4074 aa9□□□□□ -0.97
APOBEC3A-201ENST00000249116 TRAV26-1A0A087WT03 109 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 GAGE12BA1L429 117 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 MAP1LC3B2A6NCE7 125 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 UMAD1C9J7I0 102 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 GAGE7O76087 117 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 GAGE12FP0CL80 117 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 GAGE12GP0CL81 117 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 GAGE12IP0CL82 117 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 CT45A10P0DMU9 189 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 LEPP41159 167 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 CSN1S1P47710 185 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 FHITP49789 147 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 KIR3DS1Q14943 382 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 FAM74A1Q5RGS3 127 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 C9orf47Q6ZRZ4 202 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 IQCF2Q8IXL9 164 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 LINC00612Q8N6U2 182 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 RXFP4Q8TDU9 374 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 MAP1LC3BQ9GZQ8 125 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 DNAH11Q96DT5 4516 aa8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 DYNC1H1Q14204 4646 aaKnown RBP8.99□□□□□ -0.97
APOBEC3A-201ENST00000249116 PKD1P98161 4303 aa8.98□□□□□ -0.97
APOBEC3A-201ENST00000249116 PGPA6NDG6 321 aa8.98□□□□□ -0.97
APOBEC3A-201ENST00000249116 J3KRW8 73 aa8.98□□□□□ -0.97
APOBEC3A-201ENST00000249116 CDK2AP2O75956 126 aa8.98□□□□□ -0.97
APOBEC3A-201ENST00000249116 FGF8P55075 233 aaPredicted RBP8.98□□□□□ -0.97
APOBEC3A-201ENST00000249116 SLC51BQ86UW2 128 aa8.98□□□□□ -0.97
APOBEC3A-201ENST00000249116 FAM213BQ8TBF2 198 aa8.98□□□□□ -0.97
APOBEC3A-201ENST00000249116 VGLL1Q99990 258 aa8.98□□□□□ -0.97
APOBEC3A-201ENST00000249116 PYGO2Q9BRQ0 406 aa8.98□□□□□ -0.97
APOBEC3A-201ENST00000249116 AGPAT4-IT1Q9H0P7 198 aa8.98□□□□□ -0.97
APOBEC3A-201ENST00000249116 A0A0J9YY99 117 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 RBAKDNA6NC62 111 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 DIRC3C9JPN6 131 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 H3BNG1 76 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 SLC25A5P05141 298 aaKnown RBP8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 TMEM78Q5T7P6 136 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 DPPA3Q6W0C5 159 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 ARL6IP6Q8N6S5 226 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 CMTM2Q8TAZ6 248 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 FAM19A4Q96LR4 140 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 LINC00477Q96M19 166 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 TMPRSS5Q9H3S3 457 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 RPH3ALQ9UNE2 315 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 TRAV12-3A0A0B4J271 114 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 A0A1W2PRE2 83 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 GGTLC3B5MD39 225 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 NKX2-5P52952 324 aaPredicted RBP8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 EIF5AL1Q6IS14 154 aaKnown RBP8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 ZNF492Q9P255 531 aa8.97□□□□□ -0.97
APOBEC3A-201ENST00000249116 A0A1W2PPQ1 181 aa8.96□□□□□ -0.98
APOBEC3A-201ENST00000249116 A6NJY4 79 aa8.96□□□□□ -0.98
APOBEC3A-201ENST00000249116 HOXA5P20719 270 aa8.96□□□□□ -0.98
APOBEC3A-201ENST00000249116 GNG5P63218 68 aa8.96□□□□□ -0.98
APOBEC3A-201ENST00000249116 DAZ2Q13117 558 aaKnown RBP8.96□□□□□ -0.98
APOBEC3A-201ENST00000249116 GOLT1AQ6ZVE7 132 aa8.96□□□□□ -0.98
APOBEC3A-201ENST00000249116 C5orf17Q8NAS9 161 aa8.96□□□□□ -0.98
APOBEC3A-201ENST00000249116 Q8TAT8 98 aa8.96□□□□□ -0.98
APOBEC3A-201ENST00000249116 MBD3L1Q8WWY6 194 aa8.96□□□□□ -0.98
APOBEC3A-201ENST00000249116 UPK3BQ9BT76 320 aa8.96□□□□□ -0.98
APOBEC3A-201ENST00000249116 RYR1P21817 5038 aa8.95□□□□□ -0.98
APOBEC3A-201ENST00000249116 KLLNB2CW77 178 aa8.95□□□□□ -0.98
APOBEC3A-201ENST00000249116 CRISP2P16562 243 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms