RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 AKAP13Q12802 2813 aa14.36□□□□□ -0.11
PTPN12-201ENST00000248594 LAMTOR5O43504 91 aa14.35□□□□□ -0.11
PTPN12-201ENST00000248594 Q1RN00 199 aa14.35□□□□□ -0.11
PTPN12-201ENST00000248594 TMEM78Q5T7P6 136 aa14.35□□□□□ -0.11
PTPN12-201ENST00000248594 TEN1Q86WV5 123 aa14.35□□□□□ -0.11
PTPN12-201ENST00000248594 FAM110AQ9BQ89 295 aa14.35□□□□□ -0.11
PTPN12-201ENST00000248594 ATP5LO75964 103 aa14.35□□□□□ -0.11
PTPN12-201ENST00000248594 TCL1BO95988 128 aa14.35□□□□□ -0.11
PTPN12-201ENST00000248594 ATP5IP56385 69 aaPredicted RBP14.35□□□□□ -0.11
PTPN12-201ENST00000248594 TMEM155Q4W5P6 130 aa14.35□□□□□ -0.11
PTPN12-201ENST00000248594 PCSK5Q92824 1860 aa14.35□□□□□ -0.11
PTPN12-201ENST00000248594 TRBV19A0A075B6N1 114 aa14.35□□□□□ -0.11
PTPN12-201ENST00000248594 CD40P25942 277 aa14.35□□□□□ -0.11
PTPN12-201ENST00000248594 Q6ZQT7 251 aa14.35□□□□□ -0.11
PTPN12-201ENST00000248594 SLC25A16P16260 332 aa14.34□□□□□ -0.11
PTPN12-201ENST00000248594 PLEKHB2Q96CS7 222 aa14.34□□□□□ -0.11
PTPN12-201ENST00000248594 MYMXA0A1B0GTQ4 84 aa14.34□□□□□ -0.11
PTPN12-201ENST00000248594 A0A1W2PNU3 283 aaPredicted RBP14.34□□□□□ -0.11
PTPN12-201ENST00000248594 ZNF80P51504 273 aaPredicted RBP14.34□□□□□ -0.11
PTPN12-201ENST00000248594 TRGV9Q99603 122 aa14.34□□□□□ -0.11
PTPN12-201ENST00000248594 IGHV3OR16-13A0A075B7E8 117 aa14.34□□□□□ -0.11
PTPN12-201ENST00000248594 IGHV3-74A0A0B4J1X5 117 aa14.34□□□□□ -0.11
PTPN12-201ENST00000248594 NDUFV3P56181 108 aaKnown RBP14.34□□□□□ -0.11
PTPN12-201ENST00000248594 YAE1D1Q9NRH1 226 aa14.34□□□□□ -0.11
PTPN12-201ENST00000248594 TECTAO75443 2155 aa14.34□□□□□ -0.11
PTPN12-201ENST00000248594 NHLRC4P0CG21 123 aaPredicted RBP14.33□□□□□ -0.12
PTPN12-201ENST00000248594 IGHV4-39P01824 125 aa14.32□□□□□ -0.12
PTPN12-201ENST00000248594 TNFAIP6P98066 277 aaPredicted RBP14.32□□□□□ -0.12
PTPN12-201ENST00000248594 MEIG1Q5JSS6 88 aa14.32□□□□□ -0.12
PTPN12-201ENST00000248594 ZNF493Q6ZR52 646 aa14.32□□□□□ -0.12
PTPN12-201ENST00000248594 TRPT1Q86TN4 253 aaKnown RBP14.32□□□□□ -0.12
PTPN12-201ENST00000248594 TMEM167AQ8TBQ9 72 aa14.32□□□□□ -0.12
PTPN12-201ENST00000248594 SIGLEC15Q6ZMC9 328 aa14.32□□□□□ -0.12
PTPN12-201ENST00000248594 NXT2Q9NPJ8 142 aaKnown RBP14.32□□□□□ -0.12
PTPN12-201ENST00000248594 TRBV7-3A0A075B6L6 115 aa14.32□□□□□ -0.12
PTPN12-201ENST00000248594 TRGV3P03979 118 aa14.32□□□□□ -0.12
PTPN12-201ENST00000248594 CGB3P0DN86 165 aa14.32□□□□□ -0.12
PTPN12-201ENST00000248594 CGB7P0DN87 165 aa14.32□□□□□ -0.12
PTPN12-201ENST00000248594 PRADC1Q9BSG0 188 aa14.32□□□□□ -0.12
PTPN12-201ENST00000248594 RNF7Q9UBF6 113 aa14.32□□□□□ -0.12
PTPN12-201ENST00000248594 MZT1Q08AG7 82 aa14.31□□□□□ -0.12
PTPN12-201ENST00000248594 ERCC8Q13216 396 aa14.31□□□□□ -0.12
PTPN12-201ENST00000248594 IGHV1-18A0A0C4DH31 117 aa14.31□□□□□ -0.12
PTPN12-201ENST00000248594 SPRY4Q9C004 299 aa14.31□□□□□ -0.12
PTPN12-201ENST00000248594 LGALS1P09382 135 aaKnown RBP14.31□□□□□ -0.12
PTPN12-201ENST00000248594 IFITM1P13164 125 aa14.31□□□□□ -0.12
PTPN12-201ENST00000248594 DTX2Q86UW9 622 aa14.31□□□□□ -0.12
PTPN12-201ENST00000248594 SCGB3A1Q96QR1 104 aa14.31□□□□□ -0.12
PTPN12-201ENST00000248594 TNFRSF18Q9Y5U5 241 aa14.31□□□□□ -0.12
PTPN12-201ENST00000248594 FABP5P3A8MUU1 101 aa14.3□□□□□ -0.12
PTPN12-201ENST00000248594 PPP1R27Q86WC6 154 aa14.3□□□□□ -0.12
PTPN12-201ENST00000248594 NTN5Q8WTR8 489 aaPredicted RBP14.3□□□□□ -0.12
PTPN12-201ENST00000248594 SPG11Q96JI7 2443 aa14.3□□□□□ -0.12
PTPN12-201ENST00000248594 WT1P19544 449 aaPredicted RBP14.3□□□□□ -0.12
PTPN12-201ENST00000248594 DCHS2Q6V1P9 2916 aa14.3□□□□□ -0.12
PTPN12-201ENST00000248594 CRIP2P52943 208 aaPredicted RBP14.29□□□□□ -0.12
PTPN12-201ENST00000248594 U3KQK5 164 aa14.29□□□□□ -0.12
PTPN12-201ENST00000248594 IGHV3-66A0A0C4DH42 116 aa14.29□□□□□ -0.12
PTPN12-201ENST00000248594 NTN3O00634 580 aaPredicted RBP14.29□□□□□ -0.12
PTPN12-201ENST00000248594 PAX8Q06710 450 aa14.29□□□□□ -0.12
PTPN12-201ENST00000248594 GAFA1Q96PS6 74 aa14.29□□□□□ -0.12
PTPN12-201ENST00000248594 RNF185Q96GF1 192 aa14.28□□□□□ -0.12
PTPN12-201ENST00000248594 LAGE3Q14657 143 aa14.28□□□□□ -0.12
PTPN12-201ENST00000248594 IGF2-ASQ6U949 168 aa14.28□□□□□ -0.12
PTPN12-201ENST00000248594 Q6ZT83 130 aa14.28□□□□□ -0.12
PTPN12-201ENST00000248594 OR11H6Q8NGC7 330 aa14.28□□□□□ -0.12
PTPN12-201ENST00000248594 SRSF1Q07955 248 aaKnown RBP eCLIP14.27□□□□□ -0.122e-6■□□□□ 9.1
PTPN12-201ENST00000248594 CCL17Q92583 94 aa14.27□□□□□ -0.12
PTPN12-201ENST00000248594 A0A087WX48 190 aa14.27□□□□□ -0.13
PTPN12-201ENST00000248594 SLC25A20O43772 301 aa14.27□□□□□ -0.13
PTPN12-201ENST00000248594 COX7A1P24310 79 aa14.27□□□□□ -0.13
PTPN12-201ENST00000248594 PPDPFQ9H3Y8 114 aa14.27□□□□□ -0.13
PTPN12-201ENST00000248594 ZMAT4Q9H898 229 aa14.27□□□□□ -0.13
PTPN12-201ENST00000248594 NOTCH3Q9UM47 2321 aa14.27□□□□□ -0.13
PTPN12-201ENST00000248594 TAL2Q16559 108 aa14.27□□□□□ -0.13
PTPN12-201ENST00000248594 RNF125Q96EQ8 232 aa14.27□□□□□ -0.13
PTPN12-201ENST00000248594 SPANXN1Q5VSR9 72 aa14.26□□□□□ -0.13
PTPN12-201ENST00000248594 C15orf53Q8NAA6 179 aa14.26□□□□□ -0.13
PTPN12-201ENST00000248594 IGHV3-49A0A0A0MS15 119 aa14.26□□□□□ -0.13
PTPN12-201ENST00000248594 IGKV1-17P01599 117 aa14.26□□□□□ -0.13
PTPN12-201ENST00000248594 IGKV3-15P01624 115 aa14.26□□□□□ -0.13
PTPN12-201ENST00000248594 MRPL23Q16540 153 aaKnown RBP14.26□□□□□ -0.13
PTPN12-201ENST00000248594 ZNF71Q9NQZ8 489 aaPredicted RBP14.26□□□□□ -0.13
PTPN12-201ENST00000248594 IGHV3-64A0A075B6Q5 118 aa14.25□□□□□ -0.13
PTPN12-201ENST00000248594 TMEM262E9PQX1 116 aa14.25□□□□□ -0.13
PTPN12-201ENST00000248594 PRR25Q96S07 402 aa14.25□□□□□ -0.13
PTPN12-201ENST00000248594 ATP6V0E2Q8NHE4 81 aa14.25□□□□□ -0.13
PTPN12-201ENST00000248594 ZNF833PQ6ZTB9 187 aa14.25□□□□□ -0.13
PTPN12-201ENST00000248594 C9orf106Q8NAJ2 232 aa14.24□□□□□ -0.13
PTPN12-201ENST00000248594 H7C1H1 209 aa14.24□□□□□ -0.13
PTPN12-201ENST00000248594 LYRM7Q5U5X0 104 aa14.24□□□□□ -0.13
PTPN12-201ENST00000248594 CHCHD5Q9BSY4 110 aa14.24□□□□□ -0.13
PTPN12-201ENST00000248594 M0QXV9 152 aa14.24□□□□□ -0.13
PTPN12-201ENST00000248594 Q8N8P6 123 aa14.24□□□□□ -0.13
PTPN12-201ENST00000248594 SHANK2-AS3Q9BTD1 123 aa14.24□□□□□ -0.13
PTPN12-201ENST00000248594 CREBBPQ92793 2442 aa14.24□□□□□ -0.13
PTPN12-201ENST00000248594 F8VRH5 84 aa14.23□□□□□ -0.13
PTPN12-201ENST00000248594 IGLV2-23P01705 113 aa14.23□□□□□ -0.13
PTPN12-201ENST00000248594 PLNP26678 52 aa14.23□□□□□ -0.13
PTPN12-201ENST00000248594 MGPP08493 103 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms