RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 THBDP07204 575 aa9.18□□□□□ -0.94
SOX9-201ENST00000245479 Q8TAT8 98 aa9.18□□□□□ -0.94
SOX9-201ENST00000245479 TRGV9Q99603 122 aa9.18□□□□□ -0.94
SOX9-201ENST00000245479 FLNCQ14315 2725 aa9.18□□□□□ -0.94
SOX9-201ENST00000245479 P0C879 139 aa9.18□□□□□ -0.94
SOX9-201ENST00000245479 LGALS3P17931 250 aaKnown RBP9.18□□□□□ -0.94
SOX9-201ENST00000245479 FAM104BQ5XKR9 115 aa9.18□□□□□ -0.94
SOX9-201ENST00000245479 TMEM133Q9H2Q1 129 aa9.18□□□□□ -0.94
SOX9-201ENST00000245479 SPRY2O43597 315 aa9.18□□□□□ -0.94
SOX9-201ENST00000245479 IGLV2-8P01709 118 aa9.18□□□□□ -0.94
SOX9-201ENST00000245479 COX6CP09669 75 aa9.18□□□□□ -0.94
SOX9-201ENST00000245479 IGHV1-8P0DP01 117 aa9.18□□□□□ -0.94
SOX9-201ENST00000245479 TMEM167AQ8TBQ9 72 aa9.18□□□□□ -0.94
SOX9-201ENST00000245479 PHLDA3Q9Y5J5 127 aa9.18□□□□□ -0.94
SOX9-201ENST00000245479 FXYD2P54710 66 aa9.17□□□□□ -0.94
SOX9-201ENST00000245479 ZNF672Q499Z4 452 aaPredicted RBP9.17□□□□□ -0.94
SOX9-201ENST00000245479 GTSF1Q8WW33 167 aa9.17□□□□□ -0.94
SOX9-201ENST00000245479 NEU4Q8WWR8 484 aaPredicted RBP9.17□□□□□ -0.94
SOX9-201ENST00000245479 SIVA1O15304 175 aa9.17□□□□□ -0.94
SOX9-201ENST00000245479 SH2D1AO60880 128 aa9.17□□□□□ -0.94
SOX9-201ENST00000245479 APOBEC3AP31941 199 aaPredicted RBP9.17□□□□□ -0.94
SOX9-201ENST00000245479 PPP1R27Q86WC6 154 aa9.17□□□□□ -0.94
SOX9-201ENST00000245479 SCGB1A1P11684 91 aa9.17□□□□□ -0.94
SOX9-201ENST00000245479 HTN1P15515 57 aa9.17□□□□□ -0.94
SOX9-201ENST00000245479 RAB1BQ9H0U4 201 aa9.17□□□□□ -0.94
SOX9-201ENST00000245479 DCHS2Q6V1P9 2916 aa9.17□□□□□ -0.94
SOX9-201ENST00000245479 MRPL51Q4U2R6 128 aaKnown RBP9.16□□□□□ -0.94
SOX9-201ENST00000245479 MAPK1IP1LQ8NDC0 245 aa9.16□□□□□ -0.94
SOX9-201ENST00000245479 ZNF503Q96F45 646 aa9.16□□□□□ -0.94
SOX9-201ENST00000245479 SRSF8Q9BRL6 282 aaKnown RBP9.16□□□□□ -0.94
SOX9-201ENST00000245479 LOXP28300 417 aaPredicted RBP9.16□□□□□ -0.94
SOX9-201ENST00000245479 FAM120AOSQ5T036 256 aa9.16□□□□□ -0.94
SOX9-201ENST00000245479 NDUFA4L2Q9NRX3 87 aa9.16□□□□□ -0.94
SOX9-201ENST00000245479 NPYP01303 97 aa9.16□□□□□ -0.94
SOX9-201ENST00000245479 ATP5G2Q06055 141 aa9.16□□□□□ -0.94
SOX9-201ENST00000245479 SRSF1Q07955 248 aaKnown RBP eCLIP9.16□□□□□ -0.94
SOX9-201ENST00000245479 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.16□□□□□ -0.94
SOX9-201ENST00000245479 ZNF562Q6V9R5 426 aa9.16□□□□□ -0.94
SOX9-201ENST00000245479 FAM167A-AS1Q96KT0 104 aa9.16□□□□□ -0.94
SOX9-201ENST00000245479 CITED1Q99966 193 aa9.16□□□□□ -0.94
SOX9-201ENST00000245479 CDSNQ15517 529 aa9.15□□□□□ -0.94
SOX9-201ENST00000245479 Q71RC1 249 aaPredicted RBP9.15□□□□□ -0.94
SOX9-201ENST00000245479 IGHV3-11P01762 117 aa9.15□□□□□ -0.94
SOX9-201ENST00000245479 CRYBA4P53673 196 aa9.15□□□□□ -0.94
SOX9-201ENST00000245479 BRD3OSQ6XYD6 125 aa9.15□□□□□ -0.94
SOX9-201ENST00000245479 CEND1Q8N111 149 aa9.15□□□□□ -0.94
SOX9-201ENST00000245479 SRD5A1P18405 259 aa9.15□□□□□ -0.95
SOX9-201ENST00000245479 LINC01549A6NIU2 74 aa9.14□□□□□ -0.95
SOX9-201ENST00000245479 LAGE3Q14657 143 aa9.14□□□□□ -0.95
SOX9-201ENST00000245479 BOD1L2Q8IYS8 172 aa9.14□□□□□ -0.95
SOX9-201ENST00000245479 CLUHP3Q96NS8 147 aa9.14□□□□□ -0.95
SOX9-201ENST00000245479 SS18L2Q9UHA2 77 aa9.14□□□□□ -0.95
SOX9-201ENST00000245479 DOPEY1Q5JWR5 2465 aa9.14□□□□□ -0.95
SOX9-201ENST00000245479 COL5A1P20908 1838 aaPredicted RBP9.14□□□□□ -0.95
SOX9-201ENST00000245479 TRBV25-1A0A075B6N4 114 aa9.14□□□□□ -0.95
SOX9-201ENST00000245479 TNFRSF6BO95407 300 aa9.14□□□□□ -0.95
SOX9-201ENST00000245479 C16orf92Q96LL3 132 aa9.14□□□□□ -0.95
SOX9-201ENST00000245479 C8orf49Q96NF6 230 aa9.14□□□□□ -0.95
SOX9-201ENST00000245479 IGHV1-3A0A0C4DH29 117 aa9.14□□□□□ -0.95
SOX9-201ENST00000245479 LTAP01374 205 aa9.14□□□□□ -0.95
SOX9-201ENST00000245479 C12orf74Q32Q52 190 aa9.14□□□□□ -0.95
SOX9-201ENST00000245479 C1orf122Q6ZSJ8 110 aa9.14□□□□□ -0.95
SOX9-201ENST00000245479 IGKV3-20P01619 116 aa9.13□□□□□ -0.95
SOX9-201ENST00000245479 PATE2Q6UY27 113 aa9.13□□□□□ -0.95
SOX9-201ENST00000245479 MRPL35Q9NZE8 188 aaKnown RBP9.13□□□□□ -0.95
SOX9-201ENST00000245479 B5MCH6 92 aa9.13□□□□□ -0.95
SOX9-201ENST00000245479 LHBP01229 141 aa9.13□□□□□ -0.95
SOX9-201ENST00000245479 IGHV4-39P01824 125 aa9.13□□□□□ -0.95
SOX9-201ENST00000245479 NDPQ00604 133 aa9.13□□□□□ -0.95
SOX9-201ENST00000245479 ANXA2RQ3ZCQ2 193 aa9.13□□□□□ -0.95
SOX9-201ENST00000245479 PVRIGQ6DKI7 326 aa9.13□□□□□ -0.95
SOX9-201ENST00000245479 GLMPQ8WWB7 406 aa9.13□□□□□ -0.95
SOX9-201ENST00000245479 C21orf62Q9NYP8 219 aa9.13□□□□□ -0.95
SOX9-201ENST00000245479 Q8NA96 180 aa9.13□□□□□ -0.95
SOX9-201ENST00000245479 PLNP26678 52 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 HLA-DMBP28068 263 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 LINC01559Q495D7 138 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 KHDC1LQ5JSQ8 128 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 A0A1B0GXF2 115 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 IGLL5B9A064 214 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 TSPAN13O95857 204 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 FOXI2Q6ZQN5 318 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 TMEM75Q8N9X5 138 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 UTP20O75691 2785 aaKnown RBP9.12□□□□□ -0.95
SOX9-201ENST00000245479 C22orf46C9J442 243 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 C1orf159Q96HA4 380 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 DUX5Q96PT3 197 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 ITPR1Q14643 2758 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 LINC00322Q6ZN03 302 aaPredicted RBP9.12□□□□□ -0.95
SOX9-201ENST00000245479 Q8N7P7 452 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 DDB2Q92466 427 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 KIR2DL4Q99706 377 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 SIGLEC9Q9Y336 463 aa9.12□□□□□ -0.95
SOX9-201ENST00000245479 B9A039 149 aa9.11□□□□□ -0.95
SOX9-201ENST00000245479 POU2AF1Q16633 256 aa9.11□□□□□ -0.95
SOX9-201ENST00000245479 PPDPFLQ8WWR9 84 aa9.11□□□□□ -0.95
SOX9-201ENST00000245479 MBD6Q96DN6 1003 aa9.11□□□□□ -0.95
SOX9-201ENST00000245479 H7C1H1 209 aa9.11□□□□□ -0.95
SOX9-201ENST00000245479 C9JAW5 83 aa9.11□□□□□ -0.95
SOX9-201ENST00000245479 LOXL1Q08397 574 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms