RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 C21orf62Q9NYP8 219 aa10.75□□□□□ -0.69
EGR1-201ENST00000239938 MRPL35Q9NZE8 188 aaKnown RBP10.75□□□□□ -0.69
EGR1-201ENST00000239938 SRSF2Q01130 221 aaKnown RBP10.74□□□□□ -0.69
EGR1-201ENST00000239938 C5orf64Q2M2E5 130 aa10.74□□□□□ -0.69
EGR1-201ENST00000239938 Q6ZQT7 251 aa10.74□□□□□ -0.69
EGR1-201ENST00000239938 TMEM160Q9NX00 188 aa10.74□□□□□ -0.69
EGR1-201ENST00000239938 FABP5P3A8MUU1 101 aa10.74□□□□□ -0.69
EGR1-201ENST00000239938 ZNF672Q499Z4 452 aaPredicted RBP10.74□□□□□ -0.69
EGR1-201ENST00000239938 IL17RELQ6ZVW7 336 aa10.74□□□□□ -0.69
EGR1-201ENST00000239938 AKAP6Q13023 2319 aa10.74□□□□□ -0.69
EGR1-201ENST00000239938 TRAV26-2A0A0B4J265 109 aa10.73□□□□□ -0.69
EGR1-201ENST00000239938 IGLL5B9A064 214 aa10.73□□□□□ -0.69
EGR1-201ENST00000239938 DPM2O94777 84 aa10.73□□□□□ -0.69
EGR1-201ENST00000239938 LINC01559Q495D7 138 aa10.73□□□□□ -0.69
EGR1-201ENST00000239938 PRRG2O14669 202 aa10.73□□□□□ -0.69
EGR1-201ENST00000239938 TTC9CQ8N5M4 171 aa10.73□□□□□ -0.69
EGR1-201ENST00000239938 Q8N8P6 123 aa10.73□□□□□ -0.69
EGR1-201ENST00000239938 LY6G5BQ8NDX9 201 aa10.73□□□□□ -0.69
EGR1-201ENST00000239938 SPANXB1Q9NS25 103 aaPredicted RBP10.73□□□□□ -0.69
EGR1-201ENST00000239938 DPM3Q9P2X0 92 aa10.73□□□□□ -0.69
EGR1-201ENST00000239938 CHTOPQ9Y3Y2 248 aaKnown RBP10.73□□□□□ -0.69
EGR1-201ENST00000239938 LY6HO94772 140 aa10.73□□□□□ -0.69
EGR1-201ENST00000239938 IGF2-ASQ6U949 168 aa10.73□□□□□ -0.69
EGR1-201ENST00000239938 HES1Q14469 280 aa10.72□□□□□ -0.69
EGR1-201ENST00000239938 NRACQ8N912 160 aa10.72□□□□□ -0.69
EGR1-201ENST00000239938 FOXI2Q6ZQN5 318 aa10.72□□□□□ -0.69
EGR1-201ENST00000239938 OR11H6Q8NGC7 330 aa10.72□□□□□ -0.69
EGR1-201ENST00000239938 DEFB104AQ8WTQ1 72 aa10.72□□□□□ -0.69
EGR1-201ENST00000239938 SPRY2O43597 315 aa10.71□□□□□ -0.69
EGR1-201ENST00000239938 SIGMAR1Q99720 223 aa10.71□□□□□ -0.69
EGR1-201ENST00000239938 GAGE12HA6NDE8 117 aa10.71□□□□□ -0.7
EGR1-201ENST00000239938 B9A039 149 aa10.71□□□□□ -0.7
EGR1-201ENST00000239938 ATP5LO75964 103 aa10.71□□□□□ -0.7
EGR1-201ENST00000239938 EFNA4P52798 201 aa10.71□□□□□ -0.7
EGR1-201ENST00000239938 C12orf74Q32Q52 190 aa10.71□□□□□ -0.7
EGR1-201ENST00000239938 SMPXQ9UHP9 88 aa10.71□□□□□ -0.7
EGR1-201ENST00000239938 MAP1AP78559 2803 aaPredicted RBP10.7□□□□□ -0.7
EGR1-201ENST00000239938 IGHV7-4-1A0A0J9YVY3 117 aa10.7□□□□□ -0.7
EGR1-201ENST00000239938 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.7□□□□□ -0.7
EGR1-201ENST00000239938 SRSF1Q07955 248 aaKnown RBP eCLIP10.7□□□□□ -0.7
EGR1-201ENST00000239938 CEP295Q9C0D2 2601 aa10.7□□□□□ -0.7
EGR1-201ENST00000239938 IGHV3-66A0A0C4DH42 116 aa10.7□□□□□ -0.7
EGR1-201ENST00000239938 HLA-DRB4P13762 266 aa10.7□□□□□ -0.7
EGR1-201ENST00000239938 PSMG4Q5JS54 123 aa10.7□□□□□ -0.7
EGR1-201ENST00000239938 Q8NA96 180 aa10.7□□□□□ -0.7
EGR1-201ENST00000239938 SPAG8Q99932 426 aaPredicted RBP10.7□□□□□ -0.7
EGR1-201ENST00000239938 HLA-DRB4X5D2U9 266 aa10.7□□□□□ -0.7
EGR1-201ENST00000239938 HRNRQ86YZ3 2850 aaPredicted RBP10.7□□□□□ -0.7
EGR1-201ENST00000239938 IGHV3OR16-13A0A075B7E8 117 aa10.69□□□□□ -0.7
EGR1-201ENST00000239938 IGHV3-74A0A0B4J1X5 117 aa10.69□□□□□ -0.7
EGR1-201ENST00000239938 CCDC144NLQ6NUI1 221 aa10.69□□□□□ -0.7
EGR1-201ENST00000239938 KLK15Q9H2R5 256 aa10.69□□□□□ -0.7
EGR1-201ENST00000239938 NCBP2LA6PVI3 153 aaKnown RBP10.69□□□□□ -0.7
EGR1-201ENST00000239938 ODF3BA8MYP8 253 aa10.69□□□□□ -0.7
EGR1-201ENST00000239938 ZNF479Q96JC4 524 aa10.69□□□□□ -0.7
EGR1-201ENST00000239938 AGPAT4-IT1Q9H0P7 198 aa10.69□□□□□ -0.7
EGR1-201ENST00000239938 MUC6Q6W4X9 2439 aa10.69□□□□□ -0.7
EGR1-201ENST00000239938 F8W1H4 67 aa10.69□□□□□ -0.7
EGR1-201ENST00000239938 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.69□□□□□ -0.7
EGR1-201ENST00000239938 A0A087WX48 190 aa10.68□□□□□ -0.7
EGR1-201ENST00000239938 PRSS47A8MTI9 375 aa10.68□□□□□ -0.7
EGR1-201ENST00000239938 LAGE3Q14657 143 aa10.68□□□□□ -0.7
EGR1-201ENST00000239938 PRO0461Q9UI25 63 aa10.68□□□□□ -0.7
EGR1-201ENST00000239938 CELSR1Q9NYQ6 3014 aa10.68□□□□□ -0.7
EGR1-201ENST00000239938 BUB3O43684 328 aa10.68□□□□□ -0.7
EGR1-201ENST00000239938 CD300EQ496F6 205 aaPredicted RBP10.68□□□□□ -0.7
EGR1-201ENST00000239938 PRR30Q53SZ7 412 aaPredicted RBP10.68□□□□□ -0.7
EGR1-201ENST00000239938 ZFAND3Q9H8U3 227 aa10.68□□□□□ -0.7
EGR1-201ENST00000239938 ZNF292O60281 2723 aa10.67□□□□□ -0.7
EGR1-201ENST00000239938 TRBV7-3A0A075B6L6 115 aa10.67□□□□□ -0.7
EGR1-201ENST00000239938 CLPSL1A2RUU4 121 aa10.67□□□□□ -0.7
EGR1-201ENST00000239938 Q8N6K4 173 aa10.67□□□□□ -0.7
EGR1-201ENST00000239938 LINC01560Q8TB33 94 aa10.67□□□□□ -0.7
EGR1-201ENST00000239938 C20orf78Q9BR46 151 aa10.67□□□□□ -0.7
EGR1-201ENST00000239938 TRAV8-2A0A0B4J237 113 aa10.67□□□□□ -0.7
EGR1-201ENST00000239938 RAB9AP51151 201 aa10.67□□□□□ -0.7
EGR1-201ENST00000239938 MYOZ3Q8TDC0 251 aa10.67□□□□□ -0.7
EGR1-201ENST00000239938 MSRB2Q9Y3D2 182 aa10.67□□□□□ -0.7
EGR1-201ENST00000239938 IGHV7-81A0A0B4J1V7 117 aa10.66□□□□□ -0.7
EGR1-201ENST00000239938 CD3EP07766 207 aa10.66□□□□□ -0.7
EGR1-201ENST00000239938 TLN1Q9Y490 2541 aaKnown RBP10.66□□□□□ -0.7
EGR1-201ENST00000239938 RBAKDNA6NC62 111 aa10.65□□□□□ -0.7
EGR1-201ENST00000239938 GRNP28799 593 aaKnown RBP10.65□□□□□ -0.7
EGR1-201ENST00000239938 TAL2Q16559 108 aa10.65□□□□□ -0.7
EGR1-201ENST00000239938 HIST1H4GQ99525 98 aa10.65□□□□□ -0.7
EGR1-201ENST00000239938 UFC1Q9Y3C8 167 aa10.65□□□□□ -0.7
EGR1-201ENST00000239938 TGFAP01135 160 aa10.65□□□□□ -0.7
EGR1-201ENST00000239938 SPATA25Q9BR10 227 aa10.65□□□□□ -0.7
EGR1-201ENST00000239938 IGHV3-49A0A0A0MS15 119 aa10.64□□□□□ -0.71
EGR1-201ENST00000239938 CLEC3BP05452 202 aa10.64□□□□□ -0.71
EGR1-201ENST00000239938 RRN3P1Q2M238 152 aa10.64□□□□□ -0.71
EGR1-201ENST00000239938 ZNF502Q8TBZ5 544 aa10.64□□□□□ -0.71
EGR1-201ENST00000239938 LINC01548A6NM66 108 aa10.64□□□□□ -0.71
EGR1-201ENST00000239938 J3KRW8 73 aa10.64□□□□□ -0.71
EGR1-201ENST00000239938 C15orf32Q32M92 178 aa10.64□□□□□ -0.71
EGR1-201ENST00000239938 MORN3Q6PF18 240 aaPredicted RBP10.64□□□□□ -0.71
EGR1-201ENST00000239938 COL12A1Q99715 3063 aa10.64□□□□□ -0.71
EGR1-201ENST00000239938 A0A1B0GWB2 263 aa10.64□□□□□ -0.71
EGR1-201ENST00000239938 PRR9Q5T870 116 aa10.64□□□□□ -0.71
EGR1-201ENST00000239938 SCGB1A1P11684 91 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms