RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.83■□□□□ 0.45
RRP9-201ENST00000232888 HIST1H2BHQ93079 126 aa17.83■□□□□ 0.45
RRP9-201ENST00000232888 ODF3Q96PU9 254 aa17.83■□□□□ 0.45
RRP9-201ENST00000232888 HIST1H2BNQ99877 126 aa17.83■□□□□ 0.45
RRP9-201ENST00000232888 HIST1H2BMQ99879 126 aa17.83■□□□□ 0.45
RRP9-201ENST00000232888 NSD1Q96L73 2696 aaPredicted RBP17.83■□□□□ 0.44
RRP9-201ENST00000232888 HLA-DQA1P01909 254 aa17.83■□□□□ 0.44
RRP9-201ENST00000232888 ZNF688P0C7X2 276 aa17.83■□□□□ 0.44
RRP9-201ENST00000232888 LINC01559Q495D7 138 aa17.83■□□□□ 0.44
RRP9-201ENST00000232888 PSMG4Q5JS54 123 aa17.83■□□□□ 0.44
RRP9-201ENST00000232888 ZNF705DP0CH99 300 aaPredicted RBP17.82■□□□□ 0.44
RRP9-201ENST00000232888 ZNF705BP0CI00 300 aaPredicted RBP17.82■□□□□ 0.44
RRP9-201ENST00000232888 CRISP2P16562 243 aa17.82■□□□□ 0.44
RRP9-201ENST00000232888 HIST2H2BDQ6DRA6 164 aa17.82■□□□□ 0.44
RRP9-201ENST00000232888 MRPL54Q6P161 138 aaKnown RBP17.82■□□□□ 0.44
RRP9-201ENST00000232888 SNURFLB1AK76 121 aa17.81■□□□□ 0.44
RRP9-201ENST00000232888 SPINK4O60575 86 aa17.81■□□□□ 0.44
RRP9-201ENST00000232888 EBLN2Q6P2I7 272 aa17.81■□□□□ 0.44
RRP9-201ENST00000232888 TMEM136Q6ZRR5 245 aa17.81■□□□□ 0.44
RRP9-201ENST00000232888 APRG1Q8IVJ8 170 aa17.81■□□□□ 0.44
RRP9-201ENST00000232888 PGLYRP4Q96LB8 373 aa17.81■□□□□ 0.44
RRP9-201ENST00000232888 FN1P02751 2386 aaKnown RBP17.81■□□□□ 0.44
RRP9-201ENST00000232888 FLNBO75369 2602 aaKnown RBP17.81■□□□□ 0.44
RRP9-201ENST00000232888 NF1P21359 2839 aa17.8■□□□□ 0.44
RRP9-201ENST00000232888 A0A1B0GW15 77 aa17.8■□□□□ 0.44
RRP9-201ENST00000232888 A0A1B0GXF2 115 aa17.8■□□□□ 0.44
RRP9-201ENST00000232888 DUSP14O95147 198 aaKnown RBP17.8■□□□□ 0.44
RRP9-201ENST00000232888 TMEM61Q8N0U2 210 aa17.8■□□□□ 0.44
RRP9-201ENST00000232888 ZFAND2AQ8N6M9 145 aa17.8■□□□□ 0.44
RRP9-201ENST00000232888 SPAG8Q99932 426 aaPredicted RBP17.8■□□□□ 0.44
RRP9-201ENST00000232888 A0A0J9YX75 114 aa17.79■□□□□ 0.44
RRP9-201ENST00000232888 C5orf52A6NGY3 159 aa17.79■□□□□ 0.44
RRP9-201ENST00000232888 F6UB75 175 aa17.79■□□□□ 0.44
RRP9-201ENST00000232888 HBBP68871 147 aa17.79■□□□□ 0.44
RRP9-201ENST00000232888 FOXI2Q6ZQN5 318 aa17.79■□□□□ 0.44
RRP9-201ENST00000232888 MRPL18Q9H0U6 180 aaKnown RBP17.79■□□□□ 0.44
RRP9-201ENST00000232888 OR4C46A6NHA9 309 aa17.79■□□□□ 0.44
RRP9-201ENST00000232888 ORM1P02763 201 aa17.79■□□□□ 0.44
RRP9-201ENST00000232888 GZMBP10144 247 aa17.79■□□□□ 0.44
RRP9-201ENST00000232888 BORCS7Q96B45 105 aa17.79■□□□□ 0.44
RRP9-201ENST00000232888 A0A1B0GUT8 65 aa17.78■□□□□ 0.44
RRP9-201ENST00000232888 S100A8P05109 93 aa17.78■□□□□ 0.44
RRP9-201ENST00000232888 RIGQ13278 110 aa17.78■□□□□ 0.44
RRP9-201ENST00000232888 NSUN5P1Q3KNT7 163 aa17.78■□□□□ 0.44
RRP9-201ENST00000232888 TRAV21A0A0B4J279 112 aa17.77■□□□□ 0.44
RRP9-201ENST00000232888 DEFB1P60022 68 aa17.77■□□□□ 0.44
RRP9-201ENST00000232888 KRTAP10-3P60369 221 aa17.77■□□□□ 0.44
RRP9-201ENST00000232888 RAB4BP61018 213 aa17.77■□□□□ 0.44
RRP9-201ENST00000232888 CD300EQ496F6 205 aaPredicted RBP17.77■□□□□ 0.44
RRP9-201ENST00000232888 GPX1P07203 203 aa17.76■□□□□ 0.43
RRP9-201ENST00000232888 FRMD6-AS1P0C7T7 363 aa17.76■□□□□ 0.43
RRP9-201ENST00000232888 LEPP41159 167 aa17.76■□□□□ 0.43
RRP9-201ENST00000232888 SNRPEP62304 92 aaKnown RBP17.76■□□□□ 0.43
RRP9-201ENST00000232888 NDUFA6P56556 154 aa17.75■□□□□ 0.43
RRP9-201ENST00000232888 KLLNB2CW77 178 aa17.74■□□□□ 0.43
RRP9-201ENST00000232888 OR2K2Q8NGT1 345 aa17.74■□□□□ 0.43
RRP9-201ENST00000232888 TMSB15BA0A087X1C1 80 aa17.74■□□□□ 0.43
RRP9-201ENST00000232888 F2Z2F3 143 aa17.74■□□□□ 0.43
RRP9-201ENST00000232888 UBE2CO00762 179 aa17.74■□□□□ 0.43
RRP9-201ENST00000232888 APCSP02743 223 aa17.74■□□□□ 0.43
RRP9-201ENST00000232888 IGLC6P0CF74 106 aa17.74■□□□□ 0.43
RRP9-201ENST00000232888 TSPOP30536 169 aa17.74■□□□□ 0.43
RRP9-201ENST00000232888 CTRLP40313 264 aa17.74■□□□□ 0.43
RRP9-201ENST00000232888 FER1L6-AS1Q8NA97 138 aa17.74■□□□□ 0.43
RRP9-201ENST00000232888 COA6Q5JTJ3 125 aaKnown RBP17.73■□□□□ 0.43
RRP9-201ENST00000232888 PRR9Q5T870 116 aa17.73■□□□□ 0.43
RRP9-201ENST00000232888 IGKV3D-20A0A0C4DH25 116 aa17.72■□□□□ 0.43
RRP9-201ENST00000232888 HOXA5P20719 270 aa17.72■□□□□ 0.43
RRP9-201ENST00000232888 CAMPP49913 170 aa17.72■□□□□ 0.43
RRP9-201ENST00000232888 GDF5OSQ5U4N7 250 aa17.72■□□□□ 0.43
RRP9-201ENST00000232888 LYZL1Q6UWQ5 148 aa17.72■□□□□ 0.43
RRP9-201ENST00000232888 ZNF575Q86XF7 245 aa17.72■□□□□ 0.43
RRP9-201ENST00000232888 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.72■□□□□ 0.43
RRP9-201ENST00000232888 GATD1Q8NB37 220 aa17.72■□□□□ 0.43
RRP9-201ENST00000232888 CMC4P56277 68 aaPredicted RBP17.71■□□□□ 0.43
RRP9-201ENST00000232888 DEFB131AP59861 70 aa17.71■□□□□ 0.43
RRP9-201ENST00000232888 C11orf21Q9P2W6 132 aa17.71■□□□□ 0.43
RRP9-201ENST00000232888 ZNF256Q9Y2P7 627 aaPredicted RBP17.71■□□□□ 0.43
RRP9-201ENST00000232888 A8MTW9 85 aa17.7■□□□□ 0.42
RRP9-201ENST00000232888 ARMS2P0C7Q2 107 aa17.7■□□□□ 0.42
RRP9-201ENST00000232888 CD33P20138 364 aa17.7■□□□□ 0.42
RRP9-201ENST00000232888 RNASE4P34096 147 aaKnown RBP17.7■□□□□ 0.42
RRP9-201ENST00000232888 CNFNQ9BYD5 112 aa17.7■□□□□ 0.42
RRP9-201ENST00000232888 HLA-DRB4P13762 266 aa17.7■□□□□ 0.42
RRP9-201ENST00000232888 TPPP3Q9BW30 176 aa17.7■□□□□ 0.42
RRP9-201ENST00000232888 HLA-DRB4X5D2U9 266 aa17.7■□□□□ 0.42
RRP9-201ENST00000232888 CUBNO60494 3623 aa17.69■□□□□ 0.42
RRP9-201ENST00000232888 MAP6D1Q9H9H5 199 aa17.69■□□□□ 0.42
RRP9-201ENST00000232888 SETXQ7Z333 2677 aaKnown RBP17.69■□□□□ 0.42
RRP9-201ENST00000232888 F8P00451 2351 aa17.68■□□□□ 0.42
RRP9-201ENST00000232888 SAP30O75446 220 aa17.68■□□□□ 0.42
RRP9-201ENST00000232888 PF4P02776 101 aa17.68■□□□□ 0.42
RRP9-201ENST00000232888 IGLV1-51P01701 117 aa17.67■□□□□ 0.42
RRP9-201ENST00000232888 CDKN1BP46527 198 aa17.67■□□□□ 0.42
RRP9-201ENST00000232888 CLUHP3Q96NS8 147 aa17.67■□□□□ 0.42
RRP9-201ENST00000232888 BAHCC1Q9P281 2608 aa17.67■□□□□ 0.42
RRP9-201ENST00000232888 C7orf71A4D174 169 aa17.66■□□□□ 0.42
RRP9-201ENST00000232888 GRIFINA4D1Z8 144 aa17.66■□□□□ 0.42
RRP9-201ENST00000232888 J3KRW8 73 aa17.66■□□□□ 0.42
RRP9-201ENST00000232888 SLAQ13239 276 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms