RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 SPANXB1Q9NS25 103 aaPredicted RBP11.18□□□□□ -0.62
SFXN3-201ENST00000224807 TNFRSF14Q92956 283 aa11.18□□□□□ -0.62
SFXN3-201ENST00000224807 LINC01548A6NM66 108 aa11.17□□□□□ -0.62
SFXN3-201ENST00000224807 BUB1B-PAK6H3BSN5 160 aa11.17□□□□□ -0.62
SFXN3-201ENST00000224807 MGPP08493 103 aa11.17□□□□□ -0.62
SFXN3-201ENST00000224807 HLA-DRB4P13762 266 aa11.17□□□□□ -0.62
SFXN3-201ENST00000224807 TMEM155Q4W5P6 130 aa11.17□□□□□ -0.62
SFXN3-201ENST00000224807 HLA-DRB4X5D2U9 266 aa11.17□□□□□ -0.62
SFXN3-201ENST00000224807 NDUFS8O00217 210 aa11.17□□□□□ -0.62
SFXN3-201ENST00000224807 NDPQ00604 133 aa11.17□□□□□ -0.62
SFXN3-201ENST00000224807 KLHL30-AS1Q8NEE0 82 aa11.17□□□□□ -0.62
SFXN3-201ENST00000224807 CFHR4Q92496 578 aa11.17□□□□□ -0.62
SFXN3-201ENST00000224807 PRSS47A8MTI9 375 aa11.17□□□□□ -0.62
SFXN3-201ENST00000224807 Q6AWC8 147 aa11.17□□□□□ -0.62
SFXN3-201ENST00000224807 LINC00527Q9UJ94 153 aa11.17□□□□□ -0.62
SFXN3-201ENST00000224807 MBD3L4A6NDZ8 208 aaPredicted RBP11.16□□□□□ -0.62
SFXN3-201ENST00000224807 MBD3L3A6NE82 208 aaPredicted RBP11.16□□□□□ -0.62
SFXN3-201ENST00000224807 MBD3L5A6NJ08 208 aaPredicted RBP11.16□□□□□ -0.62
SFXN3-201ENST00000224807 FOXI2Q6ZQN5 318 aa11.16□□□□□ -0.62
SFXN3-201ENST00000224807 MBD3L2Q8NHZ7 208 aaPredicted RBP11.16□□□□□ -0.62
SFXN3-201ENST00000224807 RNASE6Q93091 150 aaKnown RBP11.16□□□□□ -0.62
SFXN3-201ENST00000224807 CHTOPQ9Y3Y2 248 aaKnown RBP11.16□□□□□ -0.62
SFXN3-201ENST00000224807 CSPG4Q6UVK1 2322 aa11.16□□□□□ -0.62
SFXN3-201ENST00000224807 LINC01549A6NIU2 74 aa11.15□□□□□ -0.62
SFXN3-201ENST00000224807 OR11H12B2RN74 326 aa11.15□□□□□ -0.62
SFXN3-201ENST00000224807 OR11H1Q8NG94 326 aa11.15□□□□□ -0.62
SFXN3-201ENST00000224807 OR11H2Q8NH07 326 aa11.15□□□□□ -0.62
SFXN3-201ENST00000224807 RNF185Q96GF1 192 aa11.15□□□□□ -0.62
SFXN3-201ENST00000224807 RPL11P62913 178 aaKnown RBP11.15□□□□□ -0.62
SFXN3-201ENST00000224807 ZFP2Q6ZN57 461 aa11.15□□□□□ -0.62
SFXN3-201ENST00000224807 C21orf62Q9NYP8 219 aa11.15□□□□□ -0.62
SFXN3-201ENST00000224807 TMEM14CQ9P0S9 112 aa11.15□□□□□ -0.62
SFXN3-201ENST00000224807 A0A1B0GW15 77 aa11.15□□□□□ -0.63
SFXN3-201ENST00000224807 SCGB1C2P0DMR2 95 aa11.14□□□□□ -0.63
SFXN3-201ENST00000224807 BMI1P35226 326 aa11.14□□□□□ -0.63
SFXN3-201ENST00000224807 CRYBA4P53673 196 aa11.14□□□□□ -0.63
SFXN3-201ENST00000224807 C16orf54Q6UWD8 224 aa11.14□□□□□ -0.63
SFXN3-201ENST00000224807 GEMIN7Q9H840 131 aaKnown RBP11.14□□□□□ -0.63
SFXN3-201ENST00000224807 FABP5P3A8MUU1 101 aa11.14□□□□□ -0.63
SFXN3-201ENST00000224807 SPINK8P0C7L1 97 aa11.14□□□□□ -0.63
SFXN3-201ENST00000224807 MFAP4P55083 255 aa11.14□□□□□ -0.63
SFXN3-201ENST00000224807 ZNF493Q6ZR52 646 aa11.14□□□□□ -0.63
SFXN3-201ENST00000224807 LINC01560Q8TB33 94 aa11.14□□□□□ -0.63
SFXN3-201ENST00000224807 IGHV3-64A0A075B6Q5 118 aa11.13□□□□□ -0.63
SFXN3-201ENST00000224807 MT-ATP8P03928 68 aa11.13□□□□□ -0.63
SFXN3-201ENST00000224807 COLQQ9Y215 455 aaPredicted RBP11.13□□□□□ -0.63
SFXN3-201ENST00000224807 CUL9Q8IWT3 2517 aa11.13□□□□□ -0.63
SFXN3-201ENST00000224807 S100A4P26447 101 aaKnown RBP11.13□□□□□ -0.63
SFXN3-201ENST00000224807 A0A0G2JNJ9 132 aa11.12□□□□□ -0.63
SFXN3-201ENST00000224807 SIVA1O15304 175 aa11.12□□□□□ -0.63
SFXN3-201ENST00000224807 C1orf122Q6ZSJ8 110 aa11.12□□□□□ -0.63
SFXN3-201ENST00000224807 SCGB3A1Q96QR1 104 aa11.12□□□□□ -0.63
SFXN3-201ENST00000224807 Q9UFV3 132 aa11.12□□□□□ -0.63
SFXN3-201ENST00000224807 IGF1P05019 195 aa11.12□□□□□ -0.63
SFXN3-201ENST00000224807 RPL7P18124 248 aaKnown RBP11.12□□□□□ -0.63
SFXN3-201ENST00000224807 PRO3102Q9H379 93 aa11.12□□□□□ -0.63
SFXN3-201ENST00000224807 C11orf21Q9P2W6 132 aa11.12□□□□□ -0.63
SFXN3-201ENST00000224807 ZNF815PA8K554 130 aa11.12□□□□□ -0.63
SFXN3-201ENST00000224807 GATA3P23771 443 aa11.12□□□□□ -0.63
SFXN3-201ENST00000224807 PHLDA1Q8WV24 401 aaPredicted RBP11.12□□□□□ -0.63
SFXN3-201ENST00000224807 NXT2Q9NPJ8 142 aaKnown RBP11.12□□□□□ -0.63
SFXN3-201ENST00000224807 BEX4Q9NWD9 120 aaPredicted RBP11.12□□□□□ -0.63
SFXN3-201ENST00000224807 E9PLD3 99 aa11.11□□□□□ -0.63
SFXN3-201ENST00000224807 NBR2O15453 112 aa11.11□□□□□ -0.63
SFXN3-201ENST00000224807 PVRIGQ6DKI7 326 aa11.11□□□□□ -0.63
SFXN3-201ENST00000224807 C14orf178Q8N769 122 aaPredicted RBP11.11□□□□□ -0.63
SFXN3-201ENST00000224807 RPL39LQ96EH5 51 aaKnown RBP11.11□□□□□ -0.63
SFXN3-201ENST00000224807 RAXQ9Y2V3 346 aa11.11□□□□□ -0.63
SFXN3-201ENST00000224807 NACAE9PAV3 2078 aa11.11□□□□□ -0.63
SFXN3-201ENST00000224807 E7EQL1 145 aa11.11□□□□□ -0.63
SFXN3-201ENST00000224807 HOXA3O43365 443 aaPredicted RBP11.11□□□□□ -0.63
SFXN3-201ENST00000224807 IGFL2Q6UWQ7 119 aa11.11□□□□□ -0.63
SFXN3-201ENST00000224807 DEFB123Q8N688 67 aa11.11□□□□□ -0.63
SFXN3-201ENST00000224807 KIR2DL4Q99706 377 aa11.11□□□□□ -0.63
SFXN3-201ENST00000224807 PRTN3P24158 256 aa11.1□□□□□ -0.63
SFXN3-201ENST00000224807 LAGE3Q14657 143 aa11.1□□□□□ -0.63
SFXN3-201ENST00000224807 VSTM5A8MXK1 200 aa11.1□□□□□ -0.63
SFXN3-201ENST00000224807 F8W1H4 67 aa11.1□□□□□ -0.63
SFXN3-201ENST00000224807 CLEC3BP05452 202 aa11.1□□□□□ -0.63
SFXN3-201ENST00000224807 SLC25A16P16260 332 aa11.1□□□□□ -0.63
SFXN3-201ENST00000224807 HOXB4P17483 251 aaPredicted RBP11.1□□□□□ -0.63
SFXN3-201ENST00000224807 DLX6P56179 175 aa11.1□□□□□ -0.63
SFXN3-201ENST00000224807 CLEC19AQ6UXS0 136 aa11.1□□□□□ -0.63
SFXN3-201ENST00000224807 THBDP07204 575 aa11.1□□□□□ -0.63
SFXN3-201ENST00000224807 RRN3P1Q2M238 152 aa11.1□□□□□ -0.63
SFXN3-201ENST00000224807 PLEKHB2Q96CS7 222 aa11.1□□□□□ -0.63
SFXN3-201ENST00000224807 SMAD5-AS1Q9Y6J3 95 aa11.1□□□□□ -0.63
SFXN3-201ENST00000224807 U3KQK5 164 aa11.1□□□□□ -0.63
SFXN3-201ENST00000224807 IGKV3D-20A0A0C4DH25 116 aa11.09□□□□□ -0.63
SFXN3-201ENST00000224807 FAM90A27PA6NNH2 459 aa11.09□□□□□ -0.63
SFXN3-201ENST00000224807 IGLV1-47P01700 117 aa11.09□□□□□ -0.63
SFXN3-201ENST00000224807 PRR30Q53SZ7 412 aaPredicted RBP11.09□□□□□ -0.63
SFXN3-201ENST00000224807 DPF1Q92782 380 aa11.09□□□□□ -0.63
SFXN3-201ENST00000224807 RAX2Q96IS3 184 aa11.09□□□□□ -0.63
SFXN3-201ENST00000224807 SS18L2Q9UHA2 77 aa11.09□□□□□ -0.63
SFXN3-201ENST00000224807 NCOR2Q9Y618 2525 aa11.09□□□□□ -0.63
SFXN3-201ENST00000224807 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
SFXN3-201ENST00000224807 MRPS12O15235 138 aaKnown RBP11.08□□□□□ -0.64
SFXN3-201ENST00000224807 CRYGBP07316 175 aa11.08□□□□□ -0.64
SFXN3-201ENST00000224807 PAX8Q06710 450 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms