RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 ZNF575Q86XF7 245 aa13.35□□□□□ -0.27
GCDH-201ENST00000222214 OR8A1Q8NGG7 326 aa13.35□□□□□ -0.27
GCDH-201ENST00000222214 NTF3P20783 257 aa13.34□□□□□ -0.27
GCDH-201ENST00000222214 TWIST1Q15672 202 aa13.34□□□□□ -0.27
GCDH-201ENST00000222214 IGKV3D-20A0A0C4DH25 116 aa13.34□□□□□ -0.27
GCDH-201ENST00000222214 M0R2Z0 102 aa13.34□□□□□ -0.27
GCDH-201ENST00000222214 LINC00614P0C842 121 aa13.34□□□□□ -0.27
GCDH-201ENST00000222214 HIST2H2BCQ6DN03 193 aa13.34□□□□□ -0.27
GCDH-201ENST00000222214 TMEM191AQ9H0A3 160 aa13.34□□□□□ -0.27
GCDH-201ENST00000222214 ZNF705DP0CH99 300 aaPredicted RBP13.33□□□□□ -0.28
GCDH-201ENST00000222214 ZNF705BP0CI00 300 aaPredicted RBP13.33□□□□□ -0.28
GCDH-201ENST00000222214 FAM19A2Q8N3H0 131 aa13.33□□□□□ -0.28
GCDH-201ENST00000222214 DCANP1Q8TF63 244 aa13.33□□□□□ -0.28
GCDH-201ENST00000222214 TRAV21A0A0B4J279 112 aa13.32□□□□□ -0.28
GCDH-201ENST00000222214 KRTDAPP60985 99 aa13.32□□□□□ -0.28
GCDH-201ENST00000222214 ZNF664Q8N3J9 261 aa13.32□□□□□ -0.28
GCDH-201ENST00000222214 KLHDC1Q8N7A1 406 aa13.32□□□□□ -0.28
GCDH-201ENST00000222214 FAM19A4Q96LR4 140 aa13.32□□□□□ -0.28
GCDH-201ENST00000222214 U3KQK5 164 aa13.32□□□□□ -0.28
GCDH-201ENST00000222214 IGHV4OR15-8A0A075B7B6 117 aa13.32□□□□□ -0.28
GCDH-201ENST00000222214 A0A087WW49 117 aa13.32□□□□□ -0.28
GCDH-201ENST00000222214 CD5LO43866 347 aa13.32□□□□□ -0.28
GCDH-201ENST00000222214 HOXD3P31249 432 aaPredicted RBP13.32□□□□□ -0.28
GCDH-201ENST00000222214 APRG1Q8IVJ8 170 aa13.32□□□□□ -0.28
GCDH-201ENST00000222214 ORMDL3Q8N138 153 aa13.32□□□□□ -0.28
GCDH-201ENST00000222214 ZFAND2AQ8N6M9 145 aa13.32□□□□□ -0.28
GCDH-201ENST00000222214 URB1-AS1Q96HZ7 61 aa13.32□□□□□ -0.28
GCDH-201ENST00000222214 FAM181BA6NEQ2 426 aa13.31□□□□□ -0.28
GCDH-201ENST00000222214 M0QZ24 198 aa13.31□□□□□ -0.28
GCDH-201ENST00000222214 OR5AL1P0C617 328 aa13.31□□□□□ -0.28
GCDH-201ENST00000222214 SYNJ2BPP57105 145 aa13.31□□□□□ -0.28
GCDH-201ENST00000222214 TEX43Q6ZNM6 134 aa13.31□□□□□ -0.28
GCDH-201ENST00000222214 ZANQ9Y493 2812 aa13.31□□□□□ -0.28
GCDH-201ENST00000222214 IGKV3-7A0A075B6H7 116 aa13.31□□□□□ -0.28
GCDH-201ENST00000222214 SCGB2A2Q13296 93 aa13.31□□□□□ -0.28
GCDH-201ENST00000222214 PRR31Q5SQ13 230 aa13.31□□□□□ -0.28
GCDH-201ENST00000222214 DUX5Q96PT3 197 aa13.31□□□□□ -0.28
GCDH-201ENST00000222214 C11orf21Q9P2W6 132 aa13.31□□□□□ -0.28
GCDH-201ENST00000222214 PPBPP02775 128 aa13.3□□□□□ -0.28
GCDH-201ENST00000222214 CD33P20138 364 aa13.3□□□□□ -0.28
GCDH-201ENST00000222214 SNRPD3P62318 126 aaKnown RBP13.3□□□□□ -0.28
GCDH-201ENST00000222214 AMN1Q8IY45 258 aa13.3□□□□□ -0.28
GCDH-201ENST00000222214 CACNG7P62955 275 aa13.29□□□□□ -0.28
GCDH-201ENST00000222214 C4orf3Q8WVX3 66 aa13.29□□□□□ -0.28
GCDH-201ENST00000222214 WFDC12Q8WWY7 111 aa13.29□□□□□ -0.28
GCDH-201ENST00000222214 MS4A6AQ9H2W1 248 aa13.29□□□□□ -0.28
GCDH-201ENST00000222214 D6R8Y8 96 aa13.29□□□□□ -0.28
GCDH-201ENST00000222214 SNAI2O43623 268 aa13.29□□□□□ -0.28
GCDH-201ENST00000222214 C3orf79P0CE67 100 aa13.29□□□□□ -0.28
GCDH-201ENST00000222214 DDTP30046 118 aa13.29□□□□□ -0.28
GCDH-201ENST00000222214 MRPL51Q4U2R6 128 aaKnown RBP13.29□□□□□ -0.28
GCDH-201ENST00000222214 PRELID3AQ96N28 172 aa13.29□□□□□ -0.28
GCDH-201ENST00000222214 PRO1933Q9H354 126 aa13.29□□□□□ -0.28
GCDH-201ENST00000222214 LAMTOR2Q9Y2Q5 125 aa13.29□□□□□ -0.28
GCDH-201ENST00000222214 IGHV4-4A0A075B6R2 117 aa13.28□□□□□ -0.28
GCDH-201ENST00000222214 DNAJC9-AS1A6NH13 148 aa13.28□□□□□ -0.28
GCDH-201ENST00000222214 C2orf70A6NJV1 201 aa13.28□□□□□ -0.28
GCDH-201ENST00000222214 EDN2P20800 178 aa13.28□□□□□ -0.28
GCDH-201ENST00000222214 PRR9Q5T870 116 aa13.28□□□□□ -0.28
GCDH-201ENST00000222214 SMIM15Q7Z3B0 74 aa13.28□□□□□ -0.28
GCDH-201ENST00000222214 ODF3Q96PU9 254 aa13.28□□□□□ -0.28
GCDH-201ENST00000222214 AP5S1Q9NUS5 200 aa13.28□□□□□ -0.28
GCDH-201ENST00000222214 IGHV1-24A0A0C4DH33 117 aa13.27□□□□□ -0.28
GCDH-201ENST00000222214 SRD5A1P18405 259 aa13.27□□□□□ -0.28
GCDH-201ENST00000222214 SSTP61278 116 aa13.27□□□□□ -0.28
GCDH-201ENST00000222214 PRSS3P2Q8NHM4 247 aa13.27□□□□□ -0.28
GCDH-201ENST00000222214 TENM4Q6N022 2769 aa13.27□□□□□ -0.29
GCDH-201ENST00000222214 MUC21A0A0G2JKD1 596 aa13.27□□□□□ -0.29
GCDH-201ENST00000222214 KIR2DL5BA0A0G2JN68 375 aa13.27□□□□□ -0.29
GCDH-201ENST00000222214 KIR2DL5BA0A0G2JPC4 375 aa13.27□□□□□ -0.29
GCDH-201ENST00000222214 MUC21A0A140T8X8 626 aa13.27□□□□□ -0.29
GCDH-201ENST00000222214 LINC01619G3V211 115 aa13.27□□□□□ -0.29
GCDH-201ENST00000222214 K7EQG2 157 aa13.27□□□□□ -0.29
GCDH-201ENST00000222214 MED14OSP0DP75 135 aa13.27□□□□□ -0.29
GCDH-201ENST00000222214 BTF3P20290 206 aaKnown RBP13.27□□□□□ -0.29
GCDH-201ENST00000222214 CKS2P33552 79 aa13.27□□□□□ -0.29
GCDH-201ENST00000222214 MUC21Q5SSG8 566 aa13.27□□□□□ -0.29
GCDH-201ENST00000222214 FA2HQ7L5A8 372 aa13.27□□□□□ -0.29
GCDH-201ENST00000222214 KIR2DL5AQ8N109 375 aa13.27□□□□□ -0.29
GCDH-201ENST00000222214 PEMTQ9UBM1 199 aa13.27□□□□□ -0.29
GCDH-201ENST00000222214 RNF114Q9Y508 228 aa13.27□□□□□ -0.29
GCDH-201ENST00000222214 TEX15Q9BXT5 2789 aa13.26□□□□□ -0.29
GCDH-201ENST00000222214 F6UB75 175 aa13.26□□□□□ -0.29
GCDH-201ENST00000222214 KRTAP1-1Q07627 177 aa13.26□□□□□ -0.29
GCDH-201ENST00000222214 PMCHL1Q16048 86 aa13.26□□□□□ -0.29
GCDH-201ENST00000222214 WFDC3Q8IUB2 231 aa13.26□□□□□ -0.29
GCDH-201ENST00000222214 Q8N976 141 aa13.26□□□□□ -0.29
GCDH-201ENST00000222214 VAMP8Q9BV40 100 aa13.26□□□□□ -0.29
GCDH-201ENST00000222214 ITPR3Q14573 2671 aa13.26□□□□□ -0.29
GCDH-201ENST00000222214 LEPROTL1O95214 131 aa13.25□□□□□ -0.29
GCDH-201ENST00000222214 DEFA6Q01524 100 aa13.25□□□□□ -0.29
GCDH-201ENST00000222214 Q6ZSV7 163 aa13.25□□□□□ -0.29
GCDH-201ENST00000222214 DPF1Q92782 380 aa13.25□□□□□ -0.29
GCDH-201ENST00000222214 KLLNB2CW77 178 aa13.25□□□□□ -0.29
GCDH-201ENST00000222214 CSN3P07498 182 aa13.25□□□□□ -0.29
GCDH-201ENST00000222214 YAE1D1Q9NRH1 226 aa13.25□□□□□ -0.29
GCDH-201ENST00000222214 MSRB1Q9NZV6 116 aa13.25□□□□□ -0.29
GCDH-201ENST00000222214 RNF185Q96GF1 192 aa13.24□□□□□ -0.29
GCDH-201ENST00000222214 TMEM70Q9BUB7 260 aa13.24□□□□□ -0.29
GCDH-201ENST00000222214 HSPB8Q9UJY1 196 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms