RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 KHDC1LQ5JSQ8 128 aa13.15□□□□□ -0.3
VRK1-201ENST00000216639 ZNF493Q6ZR52 646 aa13.15□□□□□ -0.3
VRK1-201ENST00000216639 DCANP1Q8TF63 244 aa13.15□□□□□ -0.3
VRK1-201ENST00000216639 DPF1Q92782 380 aa13.15□□□□□ -0.3
VRK1-201ENST00000216639 TMEM160Q9NX00 188 aa13.15□□□□□ -0.3
VRK1-201ENST00000216639 LINC01619G3V211 115 aa13.14□□□□□ -0.31
VRK1-201ENST00000216639 MS4A6AQ9H2W1 248 aa13.14□□□□□ -0.31
VRK1-201ENST00000216639 C2orf70A6NJV1 201 aa13.13□□□□□ -0.31
VRK1-201ENST00000216639 SNRPD3P62318 126 aaKnown RBP13.13□□□□□ -0.31
VRK1-201ENST00000216639 WFDC3Q8IUB2 231 aa13.13□□□□□ -0.31
VRK1-201ENST00000216639 WFDC12Q8WWY7 111 aa13.13□□□□□ -0.31
VRK1-201ENST00000216639 RCHY1Q96PM5 261 aa13.13□□□□□ -0.31
VRK1-201ENST00000216639 PEMTQ9UBM1 199 aa13.13□□□□□ -0.31
VRK1-201ENST00000216639 FASNP49327 2511 aaKnown RBP13.13□□□□□ -0.31
VRK1-201ENST00000216639 GPX1P07203 203 aa13.13□□□□□ -0.31
VRK1-201ENST00000216639 IQCJQ1A5X6 159 aa13.13□□□□□ -0.31
VRK1-201ENST00000216639 ESM1Q9NQ30 184 aa13.13□□□□□ -0.31
VRK1-201ENST00000216639 SELENOKQ9Y6D0 94 aa13.13□□□□□ -0.31
VRK1-201ENST00000216639 ZANQ9Y493 2812 aa13.12□□□□□ -0.31
VRK1-201ENST00000216639 TRAV21A0A0B4J279 112 aa13.12□□□□□ -0.31
VRK1-201ENST00000216639 RNASE1P07998 156 aaKnown RBP13.12□□□□□ -0.31
VRK1-201ENST00000216639 AMTP48728 403 aa13.12□□□□□ -0.31
VRK1-201ENST00000216639 TWIST1Q15672 202 aa13.12□□□□□ -0.31
VRK1-201ENST00000216639 OR11H1Q8NG94 326 aa13.12□□□□□ -0.31
VRK1-201ENST00000216639 OR1N2Q8NGR9 330 aa13.12□□□□□ -0.31
VRK1-201ENST00000216639 ZNF418Q8TF45 676 aaPredicted RBP13.12□□□□□ -0.31
VRK1-201ENST00000216639 IGKV3D-20A0A0C4DH25 116 aa13.11□□□□□ -0.31
VRK1-201ENST00000216639 ZNF324O75467 553 aaPredicted RBP13.11□□□□□ -0.31
VRK1-201ENST00000216639 KLHL30-AS1Q8NEE0 82 aa13.11□□□□□ -0.31
VRK1-201ENST00000216639 HSBP1O75506 76 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 SLURP1P55000 103 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 DEFB136Q30KP8 78 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 TCTEX1D4Q5JR98 221 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 C18orf65Q6ZTR6 163 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 ZFAND2AQ8N6M9 145 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 FAM19A4Q96LR4 140 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 CNFNQ9BYD5 112 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 F6UB75 175 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 K7EQG2 157 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 PMCHP20382 165 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 NTF3P20783 257 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 TFPI2P48307 235 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 SSTP61278 116 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 PRR31Q5SQ13 230 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 RNASEKQ6P5S7 137 aaKnown RBP13.1□□□□□ -0.31
VRK1-201ENST00000216639 HELZ2Q9BYK8 2649 aaKnown RBP13.1□□□□□ -0.31
VRK1-201ENST00000216639 TEX15Q9BXT5 2789 aa13.1□□□□□ -0.31
VRK1-201ENST00000216639 ITPR3Q14573 2671 aa13.09□□□□□ -0.31
VRK1-201ENST00000216639 NBPF19A0A087WUL8 3843 aa13.09□□□□□ -0.31
VRK1-201ENST00000216639 DMRTA1Q5VZB9 504 aa13.09□□□□□ -0.31
VRK1-201ENST00000216639 FAM104BQ5XKR9 115 aa13.09□□□□□ -0.31
VRK1-201ENST00000216639 ZNF575Q86XF7 245 aa13.09□□□□□ -0.31
VRK1-201ENST00000216639 C11orf21Q9P2W6 132 aa13.09□□□□□ -0.31
VRK1-201ENST00000216639 PDZD2O15018 2839 aa13.09□□□□□ -0.31
VRK1-201ENST00000216639 ZNF688P0C7X2 276 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 DEFB1P60022 68 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 PSMG4Q5JS54 123 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 PRR9Q5T870 116 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 NIT1Q86X76 327 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 APRG1Q8IVJ8 170 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 CHCHD1Q96BP2 118 aaKnown RBP13.08□□□□□ -0.32
VRK1-201ENST00000216639 C16orf95Q9H693 158 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 GSN-AS1Q9NRJ2 163 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 MUC21A0A0G2JKD1 596 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 MUC21A0A140T8X8 626 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 J3KRW8 73 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 SCGB1D1O95968 90 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 MUC21Q5SSG8 566 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 OR9G4Q8NGQ1 327 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 TMEM191AQ9H0A3 160 aa13.08□□□□□ -0.32
VRK1-201ENST00000216639 CDPF1Q6NVV7 123 aa13.07□□□□□ -0.32
VRK1-201ENST00000216639 EBLN2Q6P2I7 272 aa13.07□□□□□ -0.32
VRK1-201ENST00000216639 Q6ZWC4 215 aa13.07□□□□□ -0.32
VRK1-201ENST00000216639 GCN1Q92616 2671 aaKnown RBP13.07□□□□□ -0.32
VRK1-201ENST00000216639 OR5AL1P0C617 328 aa13.06□□□□□ -0.32
VRK1-201ENST00000216639 RNASE4P34096 147 aaKnown RBP13.06□□□□□ -0.32
VRK1-201ENST00000216639 HILS1P60008 231 aa13.06□□□□□ -0.32
VRK1-201ENST00000216639 CACNG7P62955 275 aa13.06□□□□□ -0.32
VRK1-201ENST00000216639 AMN1Q8IY45 258 aa13.06□□□□□ -0.32
VRK1-201ENST00000216639 ODF3Q96PU9 254 aa13.06□□□□□ -0.32
VRK1-201ENST00000216639 JMJD8Q96S16 334 aa13.06□□□□□ -0.32
VRK1-201ENST00000216639 NAGKQ9UJ70 344 aa13.06□□□□□ -0.32
VRK1-201ENST00000216639 LEPP41159 167 aa13.05□□□□□ -0.32
VRK1-201ENST00000216639 SMIM15Q7Z3B0 74 aa13.05□□□□□ -0.32
VRK1-201ENST00000216639 ORMDL3Q8N138 153 aa13.05□□□□□ -0.32
VRK1-201ENST00000216639 M0R2Z0 102 aa13.05□□□□□ -0.32
VRK1-201ENST00000216639 DUSP14O95147 198 aaKnown RBP13.05□□□□□ -0.32
VRK1-201ENST00000216639 LINC00614P0C842 121 aa13.05□□□□□ -0.32
VRK1-201ENST00000216639 FAM19A2Q8N3H0 131 aa13.05□□□□□ -0.32
VRK1-201ENST00000216639 U3KQK5 164 aa13.05□□□□□ -0.32
VRK1-201ENST00000216639 TRAV2A0A0B4J234 112 aa13.04□□□□□ -0.32
VRK1-201ENST00000216639 A0A0J9YX75 114 aa13.04□□□□□ -0.32
VRK1-201ENST00000216639 KLLNB2CW77 178 aa13.04□□□□□ -0.32
VRK1-201ENST00000216639 SNAI2O43623 268 aa13.04□□□□□ -0.32
VRK1-201ENST00000216639 ADAMTSL5Q6ZMM2 481 aa13.04□□□□□ -0.32
VRK1-201ENST00000216639 DYNLRB2Q8TF09 96 aa13.04□□□□□ -0.32
VRK1-201ENST00000216639 DLX4Q92988 240 aaPredicted RBP13.04□□□□□ -0.32
VRK1-201ENST00000216639 DUX3Q96PT4 197 aa13.04□□□□□ -0.32
VRK1-201ENST00000216639 D6R8Y8 96 aa13.03□□□□□ -0.32
VRK1-201ENST00000216639 ASIPP42127 132 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms