RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 C11orf52Q96A22 123 aa14.69□□□□□ -0.06
RHBDD3-201ENST00000216085 IGLV2-11P01706 119 aa14.68□□□□□ -0.06
RHBDD3-201ENST00000216085 ZNF506Q5JVG8 444 aa14.68□□□□□ -0.06
RHBDD3-201ENST00000216085 ZNF705AQ6ZN79 300 aaPredicted RBP14.68□□□□□ -0.06
RHBDD3-201ENST00000216085 C2CD4CQ8TF44 421 aa14.68□□□□□ -0.06
RHBDD3-201ENST00000216085 LINC00479Q96M42 142 aa14.68□□□□□ -0.06
RHBDD3-201ENST00000216085 ZFP30Q9Y2G7 519 aa14.68□□□□□ -0.06
RHBDD3-201ENST00000216085 KLF12Q9Y4X4 402 aa14.68□□□□□ -0.06
RHBDD3-201ENST00000216085 TRBV6-1A0A0K0K1D8 114 aa14.68□□□□□ -0.06
RHBDD3-201ENST00000216085 H7BYZ3 331 aa14.68□□□□□ -0.06
RHBDD3-201ENST00000216085 LINC01587Q99440 93 aa14.68□□□□□ -0.06
RHBDD3-201ENST00000216085 U3KQK5 164 aa14.68□□□□□ -0.06
RHBDD3-201ENST00000216085 TRAV12-3A0A0B4J271 114 aa14.67□□□□□ -0.06
RHBDD3-201ENST00000216085 SMIM9A6NGZ8 99 aa14.67□□□□□ -0.06
RHBDD3-201ENST00000216085 BTN1A1Q13410 526 aa14.67□□□□□ -0.06
RHBDD3-201ENST00000216085 MIFP14174 115 aa14.66□□□□□ -0.06
RHBDD3-201ENST00000216085 SMUG1Q53HV7 270 aa14.66□□□□□ -0.06
RHBDD3-201ENST00000216085 C1orf158Q8N1D5 194 aa14.66□□□□□ -0.06
RHBDD3-201ENST00000216085 EIF4E3Q8N5X7 224 aaKnown RBP14.66□□□□□ -0.06
RHBDD3-201ENST00000216085 NEU1Q99519 415 aa14.66□□□□□ -0.06
RHBDD3-201ENST00000216085 DNAH9Q9NYC9 4486 aa14.66□□□□□ -0.06
RHBDD3-201ENST00000216085 TMEM250H0YL14 139 aa14.65□□□□□ -0.06
RHBDD3-201ENST00000216085 NDUFS6O75380 124 aaKnown RBP14.65□□□□□ -0.06
RHBDD3-201ENST00000216085 KIR3DS1Q14943 382 aa14.65□□□□□ -0.06
RHBDD3-201ENST00000216085 RPL35P42766 123 aaKnown RBP14.65□□□□□ -0.06
RHBDD3-201ENST00000216085 TAS2R60P59551 318 aa14.65□□□□□ -0.06
RHBDD3-201ENST00000216085 RRN3P1Q2M238 152 aa14.65□□□□□ -0.06
RHBDD3-201ENST00000216085 PYGO2Q9BRQ0 406 aa14.65□□□□□ -0.06
RHBDD3-201ENST00000216085 COL7A1Q02388 2944 aa14.64□□□□□ -0.07
RHBDD3-201ENST00000216085 LTAP01374 205 aa14.64□□□□□ -0.07
RHBDD3-201ENST00000216085 Q6AWC8 147 aa14.64□□□□□ -0.07
RHBDD3-201ENST00000216085 TVP23CQ96ET8 276 aa14.64□□□□□ -0.07
RHBDD3-201ENST00000216085 TRAV21A0A0B4J279 112 aa14.63□□□□□ -0.07
RHBDD3-201ENST00000216085 PEA15Q15121 130 aa14.63□□□□□ -0.07
RHBDD3-201ENST00000216085 PRR9Q5T870 116 aa14.63□□□□□ -0.07
RHBDD3-201ENST00000216085 SMDT1Q9H4I9 107 aa14.63□□□□□ -0.07
RHBDD3-201ENST00000216085 X6R8D5 127 aa14.63□□□□□ -0.07
RHBDD3-201ENST00000216085 GCGP01275 180 aa14.62□□□□□ -0.07
RHBDD3-201ENST00000216085 RBMY1A1P0DJD3 496 aaKnown RBP14.62□□□□□ -0.07
RHBDD3-201ENST00000216085 RBMY1CP0DJD4 496 aa14.62□□□□□ -0.07
RHBDD3-201ENST00000216085 RBMY1FQ15415 496 aaKnown RBP14.62□□□□□ -0.07
RHBDD3-201ENST00000216085 C8orf49Q96NF6 230 aa14.62□□□□□ -0.07
RHBDD3-201ENST00000216085 TGP01266 2768 aa14.62□□□□□ -0.07
RHBDD3-201ENST00000216085 TENM3Q9P273 2699 aa14.62□□□□□ -0.07
RHBDD3-201ENST00000216085 RAB19A4D1S5 217 aa14.62□□□□□ -0.07
RHBDD3-201ENST00000216085 TMEM189A5PLL7 270 aa14.62□□□□□ -0.07
RHBDD3-201ENST00000216085 HTN1P15515 57 aa14.62□□□□□ -0.07
RHBDD3-201ENST00000216085 BAGE2Q86Y30 109 aa14.62□□□□□ -0.07
RHBDD3-201ENST00000216085 ZNF324O75467 553 aaPredicted RBP14.61□□□□□ -0.07
RHBDD3-201ENST00000216085 GNG4P50150 75 aa14.61□□□□□ -0.07
RHBDD3-201ENST00000216085 TMEM183AQ8IXX5 376 aa14.61□□□□□ -0.07
RHBDD3-201ENST00000216085 DERL1Q9BUN8 251 aa14.61□□□□□ -0.07
RHBDD3-201ENST00000216085 STAB2Q8WWQ8 2551 aa14.61□□□□□ -0.07
RHBDD3-201ENST00000216085 PFN1P07737 140 aaKnown RBP14.6□□□□□ -0.07
RHBDD3-201ENST00000216085 CEBPGP53567 150 aa14.6□□□□□ -0.07
RHBDD3-201ENST00000216085 UQCC3Q6UW78 93 aa14.6□□□□□ -0.07
RHBDD3-201ENST00000216085 FAM159AQ6UWV7 190 aa14.6□□□□□ -0.07
RHBDD3-201ENST00000216085 SMIM12Q96EX1 92 aa14.6□□□□□ -0.07
RHBDD3-201ENST00000216085 C11orf68Q9H3H3 251 aaKnown RBP14.6□□□□□ -0.07
RHBDD3-201ENST00000216085 IGHV4-28A0A0C4DH34 117 aa14.6□□□□□ -0.07
RHBDD3-201ENST00000216085 CENPWQ5EE01 88 aa14.6□□□□□ -0.07
RHBDD3-201ENST00000216085 IGHV1OR15-1A0A075B7D0 117 aa14.59□□□□□ -0.07
RHBDD3-201ENST00000216085 CBY3A6NI87 242 aa14.59□□□□□ -0.07
RHBDD3-201ENST00000216085 ZNF705GA8MUZ8 300 aaPredicted RBP14.59□□□□□ -0.07
RHBDD3-201ENST00000216085 ZNF674Q2M3X9 581 aa14.59□□□□□ -0.07
RHBDD3-201ENST00000216085 ZNF493Q6ZR52 646 aa14.59□□□□□ -0.07
RHBDD3-201ENST00000216085 COX8CQ7Z4L0 72 aa14.59□□□□□ -0.07
RHBDD3-201ENST00000216085 Q8NAQ8 132 aa14.59□□□□□ -0.07
RHBDD3-201ENST00000216085 C16orf74Q96GX8 76 aa14.59□□□□□ -0.07
RHBDD3-201ENST00000216085 LINC00467Q9BRT7 94 aa14.59□□□□□ -0.07
RHBDD3-201ENST00000216085 NAGKQ9UJ70 344 aa14.59□□□□□ -0.07
RHBDD3-201ENST00000216085 KRBOX1C9JBD0 128 aa14.58□□□□□ -0.08
RHBDD3-201ENST00000216085 TMEM263Q8WUH6 116 aaKnown RBP14.58□□□□□ -0.08
RHBDD3-201ENST00000216085 PARLQ9H300 379 aa14.58□□□□□ -0.08
RHBDD3-201ENST00000216085 HUWE1Q7Z6Z7 4374 aaKnown RBP14.58□□□□□ -0.08
RHBDD3-201ENST00000216085 FABP5P3A8MUU1 101 aa14.57□□□□□ -0.08
RHBDD3-201ENST00000216085 FAM162BQ5T6X4 162 aa14.57□□□□□ -0.08
RHBDD3-201ENST00000216085 NHLRC2Q8NBF2 726 aa14.57□□□□□ -0.08
RHBDD3-201ENST00000216085 ZC2HC1AQ96GY0 325 aa14.57□□□□□ -0.08
RHBDD3-201ENST00000216085 KCNS1Q96KK3 526 aa14.57□□□□□ -0.08
RHBDD3-201ENST00000216085 BIN3Q9NQY0 253 aa14.57□□□□□ -0.08
RHBDD3-201ENST00000216085 A0A0J9YWU9 116 aa14.57□□□□□ -0.08
RHBDD3-201ENST00000216085 SRP19P09132 144 aaKnown RBP14.57□□□□□ -0.08
RHBDD3-201ENST00000216085 C9JCJ5 164 aa14.56□□□□□ -0.08
RHBDD3-201ENST00000216085 ANXA2RQ3ZCQ2 193 aa14.56□□□□□ -0.08
RHBDD3-201ENST00000216085 MUC21Q5SSG8 566 aa14.56□□□□□ -0.08
RHBDD3-201ENST00000216085 TRGV11A0A075B6L2 103 aa14.55□□□□□ -0.08
RHBDD3-201ENST00000216085 MGST1P10620 155 aaKnown RBP14.55□□□□□ -0.08
RHBDD3-201ENST00000216085 ZNF80P51504 273 aaPredicted RBP14.55□□□□□ -0.08
RHBDD3-201ENST00000216085 SMIM7Q9BQ49 75 aa14.55□□□□□ -0.08
RHBDD3-201ENST00000216085 MLST8Q9BVC4 326 aa14.55□□□□□ -0.08
RHBDD3-201ENST00000216085 SDF2L1Q9HCN8 221 aa14.55□□□□□ -0.08
RHBDD3-201ENST00000216085 TEX48A0A1B0GUV7 120 aa14.55□□□□□ -0.08
RHBDD3-201ENST00000216085 EMP1P54849 157 aa14.55□□□□□ -0.08
RHBDD3-201ENST00000216085 SNURFLB1AK76 121 aa14.54□□□□□ -0.08
RHBDD3-201ENST00000216085 DEFB4AO15263 64 aa14.54□□□□□ -0.08
RHBDD3-201ENST00000216085 TDRG1Q3Y452 100 aa14.54□□□□□ -0.08
RHBDD3-201ENST00000216085 FAM74A3Q4VXF1 159 aa14.54□□□□□ -0.08
RHBDD3-201ENST00000216085 RNASE8Q8TDE3 154 aaKnown RBP14.54□□□□□ -0.08
RHBDD3-201ENST00000216085 ZNF727A8MUV8 499 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 406.9 ms