RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 F8VRH5 84 aa10.77□□□□□ -0.68
SF3A1-201ENST00000215793 NDUFS6O75380 124 aaKnown RBP10.77□□□□□ -0.68
SF3A1-201ENST00000215793 IGHV7-4-1A0A0J9YVY3 117 aa10.77□□□□□ -0.69
SF3A1-201ENST00000215793 HLA-DRB4P13762 266 aa10.77□□□□□ -0.69
SF3A1-201ENST00000215793 C20orf78Q9BR46 151 aa10.77□□□□□ -0.69
SF3A1-201ENST00000215793 SIGLEC8Q9NYZ4 499 aa10.77□□□□□ -0.69
SF3A1-201ENST00000215793 NDUFA12Q9UI09 145 aa10.77□□□□□ -0.69
SF3A1-201ENST00000215793 HLA-DRB4X5D2U9 266 aa10.77□□□□□ -0.69
SF3A1-201ENST00000215793 GTF3C1Q12789 2109 aa10.77□□□□□ -0.69
SF3A1-201ENST00000215793 IGHV1-24A0A0C4DH33 117 aa10.77□□□□□ -0.69
SF3A1-201ENST00000215793 GAGE7O76087 117 aa10.77□□□□□ -0.69
SF3A1-201ENST00000215793 GAGE12FP0CL80 117 aa10.77□□□□□ -0.69
SF3A1-201ENST00000215793 GAGE12GP0CL81 117 aa10.77□□□□□ -0.69
SF3A1-201ENST00000215793 GAGE12IP0CL82 117 aa10.77□□□□□ -0.69
SF3A1-201ENST00000215793 APOC4P55056 127 aa10.77□□□□□ -0.69
SF3A1-201ENST00000215793 ATP6V0BQ99437 205 aa10.77□□□□□ -0.69
SF3A1-201ENST00000215793 PTPRQQ9UMZ3 2332 aa10.76□□□□□ -0.69
SF3A1-201ENST00000215793 COX8AP10176 69 aa10.76□□□□□ -0.69
SF3A1-201ENST00000215793 PFN2P35080 140 aa10.76□□□□□ -0.69
SF3A1-201ENST00000215793 VOPP1Q96AW1 172 aa10.76□□□□□ -0.69
SF3A1-201ENST00000215793 ZC2HC1AQ96GY0 325 aa10.76□□□□□ -0.69
SF3A1-201ENST00000215793 FNDC1Q4ZHG4 1894 aaPredicted RBP10.76□□□□□ -0.69
SF3A1-201ENST00000215793 CFHR3Q02985 330 aa10.76□□□□□ -0.69
SF3A1-201ENST00000215793 ZNF491Q8N8L2 437 aa10.76□□□□□ -0.69
SF3A1-201ENST00000215793 UBE2WQ96B02 151 aa10.76□□□□□ -0.69
SF3A1-201ENST00000215793 BDP1A6H8Y1 2624 aa10.76□□□□□ -0.69
SF3A1-201ENST00000215793 TRAV12-2A0A075B6T6 113 aa10.75□□□□□ -0.69
SF3A1-201ENST00000215793 Q6ZWC4 215 aa10.75□□□□□ -0.69
SF3A1-201ENST00000215793 C9orf118A6NHY6 69 aa10.75□□□□□ -0.69
SF3A1-201ENST00000215793 EDA2RQ9HAV5 297 aa10.75□□□□□ -0.69
SF3A1-201ENST00000215793 MRPL35Q9NZE8 188 aaKnown RBP10.75□□□□□ -0.69
SF3A1-201ENST00000215793 NPYP01303 97 aa10.75□□□□□ -0.69
SF3A1-201ENST00000215793 IL15RAQ13261 267 aa10.75□□□□□ -0.69
SF3A1-201ENST00000215793 TRAV26-2A0A0B4J265 109 aa10.74□□□□□ -0.69
SF3A1-201ENST00000215793 ZSWIM8A7E2V4 1837 aa10.74□□□□□ -0.69
SF3A1-201ENST00000215793 TAL2Q16559 108 aa10.74□□□□□ -0.69
SF3A1-201ENST00000215793 NKAPP1Q8N9T2 125 aa10.74□□□□□ -0.69
SF3A1-201ENST00000215793 LENEPQ9Y5L5 61 aa10.74□□□□□ -0.69
SF3A1-201ENST00000215793 IGLL1P15814 213 aa10.74□□□□□ -0.69
SF3A1-201ENST00000215793 DIAPH2-AS1Q14236 149 aa10.74□□□□□ -0.69
SF3A1-201ENST00000215793 IGHV2-5P01817 119 aa10.73□□□□□ -0.69
SF3A1-201ENST00000215793 RPL32P62910 135 aaKnown RBP10.73□□□□□ -0.69
SF3A1-201ENST00000215793 PPDPFLQ8WWR9 84 aa10.73□□□□□ -0.69
SF3A1-201ENST00000215793 TMEM126AQ9H061 195 aa10.73□□□□□ -0.69
SF3A1-201ENST00000215793 HERVK_113P63121 156 aa10.73□□□□□ -0.69
SF3A1-201ENST00000215793 ACACBO00763 2458 aa10.73□□□□□ -0.69
SF3A1-201ENST00000215793 TCF15Q12870 199 aa10.73□□□□□ -0.69
SF3A1-201ENST00000215793 GAGE6Q13070 117 aa10.73□□□□□ -0.69
SF3A1-201ENST00000215793 PRO1854Q9UHT4 67 aa10.73□□□□□ -0.69
SF3A1-201ENST00000215793 TTC28Q96AY4 2481 aa10.73□□□□□ -0.69
SF3A1-201ENST00000215793 LTAP01374 205 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 MRPL53Q96EL3 112 aaKnown RBP10.72□□□□□ -0.69
SF3A1-201ENST00000215793 IGLC7A0M8Q6 106 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 UBL5Q9BZL1 73 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 IGHV3-38A0A0C4DH36 116 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 F8W1H4 67 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 K7EMI3 77 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 FGF6P10767 208 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 RMI2Q96E14 147 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 RLFQ13129 1914 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 C22orf46C9J442 243 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 ZNF493Q6ZR52 646 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 SPANXDQ9BXN6 97 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 J3QQQ9 107 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 FOXI2Q6ZQN5 318 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 PIP4P1Q86T03 277 aa10.72□□□□□ -0.69
SF3A1-201ENST00000215793 NOTCH2Q04721 2471 aa10.71□□□□□ -0.69
SF3A1-201ENST00000215793 KLF5Q13887 457 aaPredicted RBP10.71□□□□□ -0.69
SF3A1-201ENST00000215793 VWC2Q2TAL6 325 aa10.71□□□□□ -0.69
SF3A1-201ENST00000215793 UTF1Q5T230 341 aa10.71□□□□□ -0.69
SF3A1-201ENST00000215793 COL4A6Q14031 1691 aa10.71□□□□□ -0.7
SF3A1-201ENST00000215793 TRAV13-2A0A0B4J235 113 aa10.71□□□□□ -0.7
SF3A1-201ENST00000215793 WIPF3A6NGB9 483 aa10.71□□□□□ -0.7
SF3A1-201ENST00000215793 ETDBQ3ZM63 59 aa10.71□□□□□ -0.7
SF3A1-201ENST00000215793 NXPH4O95158 308 aa10.7□□□□□ -0.7
SF3A1-201ENST00000215793 RBMY1FQ15415 496 aaKnown RBP10.7□□□□□ -0.7
SF3A1-201ENST00000215793 LURAP1LQ8IV03 231 aa10.7□□□□□ -0.7
SF3A1-201ENST00000215793 RBAKDNA6NC62 111 aa10.7□□□□□ -0.7
SF3A1-201ENST00000215793 IGHV2-70P01814 119 aa10.7□□□□□ -0.7
SF3A1-201ENST00000215793 J3QKU1 62 aa10.7□□□□□ -0.7
SF3A1-201ENST00000215793 SIVA1O15304 175 aa10.7□□□□□ -0.7
SF3A1-201ENST00000215793 MORN5Q5VZ52 161 aa10.7□□□□□ -0.7
SF3A1-201ENST00000215793 PLXNA4Q9HCM2 1894 aa10.69□□□□□ -0.7
SF3A1-201ENST00000215793 RHOHQ15669 191 aa10.69□□□□□ -0.7
SF3A1-201ENST00000215793 WIPF2Q8TF74 440 aaPredicted RBP10.69□□□□□ -0.7
SF3A1-201ENST00000215793 AGPAT4-IT1Q9H0P7 198 aa10.69□□□□□ -0.7
SF3A1-201ENST00000215793 C11orf53Q8IXP5 236 aa10.69□□□□□ -0.7
SF3A1-201ENST00000215793 CTSZQ9UBR2 303 aa10.69□□□□□ -0.7
SF3A1-201ENST00000215793 NBL1P41271 181 aa10.69□□□□□ -0.7
SF3A1-201ENST00000215793 BVES-AS1Q5T3Y7 98 aa10.69□□□□□ -0.7
SF3A1-201ENST00000215793 SLX1AQ9BQ83 275 aa10.69□□□□□ -0.7
SF3A1-201ENST00000215793 VPREB3Q9UKI3 123 aa10.69□□□□□ -0.7
SF3A1-201ENST00000215793 SHISA9B4DS77 424 aa10.69□□□□□ -0.7
SF3A1-201ENST00000215793 NDUFS7O75251 213 aa10.69□□□□□ -0.7
SF3A1-201ENST00000215793 FAM120AOSQ5T036 256 aa10.69□□□□□ -0.7
SF3A1-201ENST00000215793 BOD1L2Q8IYS8 172 aa10.69□□□□□ -0.7
SF3A1-201ENST00000215793 LYPD6BQ8NI32 183 aa10.69□□□□□ -0.7
SF3A1-201ENST00000215793 ZGRF1Q86YA3 2104 aa10.68□□□□□ -0.7
SF3A1-201ENST00000215793 K7EP34 96 aa10.68□□□□□ -0.7
SF3A1-201ENST00000215793 CEND1Q8N111 149 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms