RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 G3V4G9 280 aa10.82□□□□□ -0.68
USH1C-201ENST00000005226 CHAC1Q9BUX1 264 aa10.82□□□□□ -0.68
USH1C-201ENST00000005226 COL6A6A6NMZ7 2263 aa10.81□□□□□ -0.68
USH1C-201ENST00000005226 CELSR1Q9NYQ6 3014 aa10.81□□□□□ -0.68
USH1C-201ENST00000005226 IGKCP01834 107 aa10.81□□□□□ -0.68
USH1C-201ENST00000005226 ZFP36P26651 326 aaKnown RBP10.81□□□□□ -0.68
USH1C-201ENST00000005226 NHP2Q9NX24 153 aaKnown RBP10.81□□□□□ -0.68
USH1C-201ENST00000005226 TRBV25-1A0A075B6N4 114 aa10.81□□□□□ -0.68
USH1C-201ENST00000005226 G3V318 75 aa10.81□□□□□ -0.68
USH1C-201ENST00000005226 SMIM17P0DL12 118 aa10.81□□□□□ -0.68
USH1C-201ENST00000005226 EFNA4P52798 201 aa10.81□□□□□ -0.68
USH1C-201ENST00000005226 RPL24P83731 157 aaKnown RBP10.81□□□□□ -0.68
USH1C-201ENST00000005226 CLEC19AQ6UXS0 136 aa10.81□□□□□ -0.68
USH1C-201ENST00000005226 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.81□□□□□ -0.68
USH1C-201ENST00000005226 ZNF48Q96MX3 618 aaPredicted RBP10.81□□□□□ -0.68
USH1C-201ENST00000005226 NPFFR1Q9GZQ6 430 aa10.81□□□□□ -0.68
USH1C-201ENST00000005226 MRPL35Q9NZE8 188 aaKnown RBP10.81□□□□□ -0.68
USH1C-201ENST00000005226 FABP2P12104 132 aa10.8□□□□□ -0.68
USH1C-201ENST00000005226 ZMAT4Q9H898 229 aa10.8□□□□□ -0.68
USH1C-201ENST00000005226 MUC6Q6W4X9 2439 aa10.8□□□□□ -0.68
USH1C-201ENST00000005226 BUB3O43684 328 aa10.8□□□□□ -0.68
USH1C-201ENST00000005226 AGRNO00468 2067 aa10.8□□□□□ -0.68
USH1C-201ENST00000005226 IGF1P05019 195 aa10.79□□□□□ -0.68
USH1C-201ENST00000005226 NEGR1Q7Z3B1 354 aa10.79□□□□□ -0.68
USH1C-201ENST00000005226 Q8N9W7 124 aa10.79□□□□□ -0.68
USH1C-201ENST00000005226 VKORC1Q9BQB6 163 aa10.79□□□□□ -0.68
USH1C-201ENST00000005226 KLK15Q9H2R5 256 aa10.79□□□□□ -0.68
USH1C-201ENST00000005226 NXT2Q9NPJ8 142 aaKnown RBP10.79□□□□□ -0.68
USH1C-201ENST00000005226 MSRB2Q9Y3D2 182 aa10.79□□□□□ -0.68
USH1C-201ENST00000005226 Q8N6K4 173 aa10.79□□□□□ -0.68
USH1C-201ENST00000005226 TIMD4Q96H15 378 aa10.79□□□□□ -0.68
USH1C-201ENST00000005226 IGLV2-18A0A075B6J9 118 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 CCL21O00585 134 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 DEFB1P60022 68 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 LINC01559Q495D7 138 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 CNFNQ9BYD5 112 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 ZFAND3Q9H8U3 227 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 CLPSL1A2RUU4 121 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 ATP6V0E1O15342 81 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 DPM2O94777 84 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 Q8N8P6 123 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 TMEM190Q8WZ59 177 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 IGF2RP11717 2491 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 TRAV8-2A0A0B4J237 113 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 MTURNQ8N3F0 131 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 ZNF502Q8TBZ5 544 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 LINC00527Q9UJ94 153 aa10.78□□□□□ -0.68
USH1C-201ENST00000005226 MAP1AP78559 2803 aaPredicted RBP10.77□□□□□ -0.68
USH1C-201ENST00000005226 M0R1W7 72 aa10.77□□□□□ -0.69
USH1C-201ENST00000005226 GOSR1O95249 250 aa10.77□□□□□ -0.69
USH1C-201ENST00000005226 DEFB104AQ8WTQ1 72 aa10.77□□□□□ -0.69
USH1C-201ENST00000005226 TEX48A0A1B0GUV7 120 aa10.77□□□□□ -0.69
USH1C-201ENST00000005226 TCF15Q12870 199 aa10.77□□□□□ -0.69
USH1C-201ENST00000005226 NRACQ8N912 160 aa10.77□□□□□ -0.69
USH1C-201ENST00000005226 IGHV7-4-1A0A0J9YVY3 117 aa10.76□□□□□ -0.69
USH1C-201ENST00000005226 LINC01546A6NGU7 62 aa10.76□□□□□ -0.69
USH1C-201ENST00000005226 LCNL1Q6ZST4 164 aa10.76□□□□□ -0.69
USH1C-201ENST00000005226 PHLDA1Q8WV24 401 aaPredicted RBP10.76□□□□□ -0.69
USH1C-201ENST00000005226 CCDC140Q96MF4 163 aa10.76□□□□□ -0.69
USH1C-201ENST00000005226 H3BVH4 76 aa10.76□□□□□ -0.69
USH1C-201ENST00000005226 PRR9Q5T870 116 aa10.76□□□□□ -0.69
USH1C-201ENST00000005226 SPANXN1Q5VSR9 72 aa10.76□□□□□ -0.69
USH1C-201ENST00000005226 TMEM238C9JI98 176 aa10.75□□□□□ -0.69
USH1C-201ENST00000005226 CCDC144NLQ6NUI1 221 aa10.75□□□□□ -0.69
USH1C-201ENST00000005226 CEND1Q8N111 149 aa10.75□□□□□ -0.69
USH1C-201ENST00000005226 OR5A1Q8NGJ0 315 aa10.75□□□□□ -0.69
USH1C-201ENST00000005226 MYOZ3Q8TDC0 251 aa10.75□□□□□ -0.69
USH1C-201ENST00000005226 FOXC1Q12948 553 aa10.75□□□□□ -0.69
USH1C-201ENST00000005226 LAGE3Q14657 143 aa10.75□□□□□ -0.69
USH1C-201ENST00000005226 TMEM78Q5T7P6 136 aa10.75□□□□□ -0.69
USH1C-201ENST00000005226 AMTNQ6UX39 209 aa10.75□□□□□ -0.69
USH1C-201ENST00000005226 SRSF2Q01130 221 aaKnown RBP10.74□□□□□ -0.69
USH1C-201ENST00000005226 WFDC2Q14508 124 aa10.74□□□□□ -0.69
USH1C-201ENST00000005226 C8orf86Q6ZUL3 223 aa10.74□□□□□ -0.69
USH1C-201ENST00000005226 HIGD1BQ9P298 99 aa10.74□□□□□ -0.69
USH1C-201ENST00000005226 SCGB2A1O75556 95 aa10.73□□□□□ -0.69
USH1C-201ENST00000005226 ATP5LO75964 103 aa10.73□□□□□ -0.69
USH1C-201ENST00000005226 EBI3Q14213 229 aa10.73□□□□□ -0.69
USH1C-201ENST00000005226 PIFOQ8TCI5 191 aa10.73□□□□□ -0.69
USH1C-201ENST00000005226 FAM110DQ8TAY7 271 aaPredicted RBP10.73□□□□□ -0.69
USH1C-201ENST00000005226 IGLL5B9A064 214 aa10.72□□□□□ -0.69
USH1C-201ENST00000005226 M0R381 172 aa10.72□□□□□ -0.69
USH1C-201ENST00000005226 TMEM219Q86XT9 240 aa10.72□□□□□ -0.69
USH1C-201ENST00000005226 SPTAN1Q13813 2472 aaKnown RBP10.72□□□□□ -0.69
USH1C-201ENST00000005226 IGHV3OR16-10A0A075B7F0 116 aa10.72□□□□□ -0.69
USH1C-201ENST00000005226 H3BMG7 143 aa10.72□□□□□ -0.69
USH1C-201ENST00000005226 SH2D6Q7Z4S9 175 aa10.72□□□□□ -0.69
USH1C-201ENST00000005226 AJUBAQ96IF1 538 aa10.72□□□□□ -0.69
USH1C-201ENST00000005226 C20orf173Q96LM9 149 aa10.72□□□□□ -0.69
USH1C-201ENST00000005226 COL12A1Q99715 3063 aa10.72□□□□□ -0.69
USH1C-201ENST00000005226 A0A1W2PPR1 153 aa10.71□□□□□ -0.69
USH1C-201ENST00000005226 RPL39LQ96EH5 51 aaKnown RBP10.71□□□□□ -0.69
USH1C-201ENST00000005226 HIST1H4GQ99525 98 aa10.71□□□□□ -0.69
USH1C-201ENST00000005226 TM2D2Q9BX73 214 aa10.71□□□□□ -0.69
USH1C-201ENST00000005226 IGKV3-7A0A075B6H7 116 aa10.71□□□□□ -0.69
USH1C-201ENST00000005226 A0A087WX48 190 aa10.71□□□□□ -0.69
USH1C-201ENST00000005226 C12orf74Q32Q52 190 aa10.71□□□□□ -0.69
USH1C-201ENST00000005226 C16orf92Q96LL3 132 aa10.71□□□□□ -0.69
USH1C-201ENST00000005226 SLC50A1Q9BRV3 221 aa10.71□□□□□ -0.69
USH1C-201ENST00000005226 SAA4P35542 130 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms