RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Prss22Q9ER10 306 aa17.06■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Sdf2l1Q9ESP1 221 aa17.06■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Trbv19A0A0B4J1H4 117 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 E430018J23RikE9PZQ8 461 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Thap8E9Q695 213 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Gm21974F6W3F3 119 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Smad7O35253 426 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 P04212 136 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Gm9Q3UKW5 162 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Gm4792Q569Q2 183 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Zc2hc1aQ8BJH1 324 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 SbsnQ8CIT9 700 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Vmn1r211Q8R266 298 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr1370Q8VFG4 316 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr816Q8VFU2 312 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr1297Q8VGE8 312 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Smim8Q9CQQ0 97 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Cox20Q9D7J4 117 aa17.05■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr39E9PVX1 319 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Esp8F7AMQ8 149 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Hmgb3O54879 200 aaKnown RBP17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Slc25a17O70579 307 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Iglc2P01844 104 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Vdac1Q60932 296 aaKnown RBP17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 PhyhiplQ8BGT8 375 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr368Q8VF22 327 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Rnf141Q99MB7 230 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Fam96bQ9D187 163 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 CutcQ9D8X1 272 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Gm17333C6EQI3 125 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Zfp493E9Q1L8 384 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Cd3eP22646 189 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Gm1673Q3UR78 90 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Ubald1Q6P3B2 176 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Neil2Q6R2P8 329 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Zfp273Q7M6W8 501 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr1204Q7TR10 309 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Gm26558Q8BLW8 286 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Vmn1r226Q8R2A8 298 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Zfp958Q99LG7 467 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 FibinQ9CQS3 217 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Eny2Q9JIX0 101 aaKnown RBP17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Chst4Q9R1I1 388 aa17.04■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Gm37797A0A1D5RLC8 261 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Vmn1r128L7N2B4 307 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 B2mP01887 119 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Pax2P32114 414 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Rpl8P62918 257 aaKnown RBP17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Gm648Q3UJ22 213 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 MyocosQ3UWS6 143 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Patz1Q5NBY9 687 aaKnown RBP17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Rnf182Q8C432 247 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 0610009B22RikQ8R3W2 140 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Mpped1Q91ZG2 326 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Med28Q920D3 178 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Xrcc3Q9CXE6 349 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Tmem50aQ9CXL1 157 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Dram1Q9DC58 238 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Ccl28Q9JIL2 130 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Timm23Q9WTQ8 209 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Ank2Q8C8R3 3898 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Armcx4E9PWM3 2356 aa17.03■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr364-ps1A0A140T8Q2 307 aa17.02■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 P01803 113 aa17.02■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Stfa1P35175 97 aa17.02■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Ube2e1P52482 193 aa17.02■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Vmn1r222Q8R269 308 aa17.02■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Ap5s1Q9D742 170 aa17.02■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Tlnrd1Q9ERE8 362 aa17.02■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Plekha2Q9ERS5 425 aa17.02■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Hdgfl3Q9JMG7 202 aa17.02■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 GlrxQ9QUH0 107 aa17.02■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Angptl4Q9Z1P8 410 aa17.02■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Cacna1iE9Q7P2 2199 aa17.02■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr1458A0A1L1SSD5 307 aa17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Olfr147Q60886 317 aa17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Iba57Q8CAK1 358 aaKnown RBP17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Mmp28Q8CGV8 520 aa17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Gp2Q9D733 531 aa17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 HeylQ9DBX7 326 aa17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Fgf16Q9ESL8 207 aa17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Gm572B1ARY8 399 aa17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Cdk2ap1O35207 114 aa17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Sssca1P56873 199 aa17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Q6PIU9 354 aa17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Pygo1Q9D0P5 417 aa17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Mrpl30Q9D7N6 160 aa17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Bin3Q9JI08 253 aa17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Hsd17b6Q9R092 317 aa17.01■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Ighv7-2A0A0A6YX91 119 aa17■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Olfr284A0A0U1RP76 321 aa17■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Chek1O35280 476 aa17■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Npy1rQ04573 382 aa17■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Dhrs2Q149L0 282 aa17■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Q504N7 393 aa17■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Spsb3Q571F5 354 aa17■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Olfr112Q8C0S2 320 aa17■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Olfr482Q8VG03 323 aa17■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Ppp1r14aQ91VC7 147 aa17■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Hint2Q9D0S9 163 aa17■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms