RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 TymsP07607 307 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr15P23275 312 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Foxa2P35583 459 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 A3galt2Q3V1N9 370 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Slc25a35Q5SWT3 300 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gm4133K9J7G6 307 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gm20878L7N244 103 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 GaptQ8CB93 157 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Pitpnc1Q8K4R4 332 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Slc25a2Q99ML6 265 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gm9376G3UW68 176 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Srsf6Q3TWW8 339 aaKnown RBP9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Mbd3l2Q3UXB0 228 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Nup35Q8R4R6 325 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Ighv9-3A0A0B4J1J5 117 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Spink11Q09TK7 88 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 PmelQ60696 626 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Ccdc198Q9CPZ1 294 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Tmem219Q9D123 240 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Ly6g6dQ9Z1Q3 135 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Dnajc30P59041 219 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Q3TEI4 1023 aa9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Cyb5r3Q9DCN2 301 aaKnown RBP9.39□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Kif26aQ52KG5 1881 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 H2al1oL7MU04 110 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Psg19Q4KL31 475 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Bpifb3Q80ZU7 473 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Zpld1Q8BGZ8 415 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr1331K7N684 317 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Egr1P08046 533 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Rps11P62281 158 aaKnown RBP9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Ssbp3Q9D032 388 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr481Q8VGI5 312 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Ube2tQ9CQ37 204 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 RprmQ9JJ72 109 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gm21775J3KMK6 180 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Khdc1aQ3UWR2 166 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Tmem97Q8VD00 176 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gm6525A0A0A6YW33 106 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Igfbp3P47878 292 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gm9945Q8BNZ3 91 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr123Q8VFQ1 309 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Lhx2Q9Z0S2 406 aa9.38□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gm10428J3QNV7 132 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 PilraQ2YFS3 302 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Dram1Q9DC58 238 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Plcxd2B2RXA1 340 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 A630076J17RikJ3QQ32 107 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Zmat5Q9CQR5 170 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Rnf115Q9D0C1 305 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 FetubQ9QXC1 388 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Trbv15A0A0A6YYE3 115 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Igkv9-124A0A0G2JDR3 117 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr1191-ps1A0A1L1STD5 311 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr749E9Q438 313 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Cela3bQ9CQ52 269 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gm42517A0A1Y7VLQ2 374 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 P18532 116 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 SelenotP62342 195 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 SnrpcQ62241 159 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Mpv17lQ99MS3 194 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 DnlzQ9D113 177 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 MylkQ6PDN3 1941 aaKnown RBP9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Ighv6-3A0A075B5T2 118 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Scgb2a2J3KMP9 96 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Trav6d-4Q5R1I0 115 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr25Q7TRD6 313 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gm10283Q8C3L5 117 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Tmem139E9PX92 214 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Cxcl2P10889 100 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr958Q8VEY3 312 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr195Q8VGQ6 308 aa9.37□□□□□ -0.91
Scn8a-203ENSMUST00000108908 NrtnP97463 195 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Dlx1Q64317 255 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Fbxw4Q9JMJ2 410 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Efemp2Q9WVJ9 443 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Ankrd66J3QNN4 192 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Mpv17P19258 176 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Rnd3P61588 244 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Wrap73Q9JM98 462 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Efnb1P52795 345 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Smdt1Q9DB10 107 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Rnase2O35291 155 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr1168Q7TR25 312 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Mbnl3Q8R003 342 aaKnown RBP9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 EppinQ9DA01 134 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Shank1D3YZU1 2167 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 MosP00536 390 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr1295Q8VF48 312 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr1202Q8VF98 309 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Tmem42Q9CR22 157 aa9.36□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr175-ps1A0A140T8K4 308 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Rab24P35290 203 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Hmga2P52927 108 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr1535Q7TQU0 326 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr1413Q8VGU3 323 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 BC024063A0A1W2P7G7 749 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr553Q7TRS6 326 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 BlnkQ9QUN3 457 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 IcosQ9WVS0 200 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms