RNA–Protein interactions for RNA: ENST00000640460.1

PAX6-272, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-272ENST00000640460 CXorf65A6NEN9 183 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 DIRC3C9JPN6 131 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 GCGP01275 180 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 MT-ND4LP03901 98 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 ELOBQ15370 118 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 C15orf54Q8N8G6 183 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 NHLRC2Q8NBF2 726 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 ASCL2Q99929 193 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 SPAG8Q99932 426 aaPredicted RBP9.36□□□□□ -0.91
PAX6-272ENST00000640460 CTDSP1Q9GZU7 261 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 ZNF331Q9NQX6 463 aaPredicted RBP9.36□□□□□ -0.91
PAX6-272ENST00000640460 URGCP-MRPS24S4R325 110 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 IGKV3-7A0A075B6H7 116 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 TRAV8-2A0A0B4J237 113 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 ZNF253O75346 499 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 CD7P09564 240 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 ATF4P18848 351 aaPredicted RBP9.36□□□□□ -0.91
PAX6-272ENST00000640460 GOLT1AQ6ZVE7 132 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 GTSCR1Q86UQ5 136 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 BAGE2Q86Y30 109 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 CMTM2Q8TAZ6 248 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 ANAPC16Q96DE5 110 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 SFRP2Q96HF1 295 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 GPR82Q96P67 336 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 MLST8Q9BVC4 326 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 ZNF705FA8MVS1 300 aaPredicted RBP9.35□□□□□ -0.91
PAX6-272ENST00000640460 PFN1P07737 140 aaKnown RBP9.35□□□□□ -0.91
PAX6-272ENST00000640460 CXCL1P09341 107 aa9.35□□□□□ -0.91
PAX6-272ENST00000640460 GALR1P47211 349 aa9.35□□□□□ -0.91
PAX6-272ENST00000640460 PSG9Q00887 426 aa9.35□□□□□ -0.91
PAX6-272ENST00000640460 GRAMD2BQ96HH9 432 aa9.35□□□□□ -0.91
PAX6-272ENST00000640460 LTAP01374 205 aa9.34□□□□□ -0.91
PAX6-272ENST00000640460 RPL11P62913 178 aaKnown RBP9.34□□□□□ -0.91
PAX6-272ENST00000640460 GBGT1Q8N5D6 347 aa9.34□□□□□ -0.91
PAX6-272ENST00000640460 RNASE7Q9H1E1 156 aaKnown RBP9.34□□□□□ -0.91
PAX6-272ENST00000640460 HUWE1Q7Z6Z7 4374 aaKnown RBP9.34□□□□□ -0.91
PAX6-272ENST00000640460 TGIF2-C20orf24A0A0A6YYL0 155 aa9.34□□□□□ -0.92
PAX6-272ENST00000640460 H7BYZ3 331 aa9.34□□□□□ -0.92
PAX6-272ENST00000640460 FRMD6-AS1P0C7T7 363 aa9.34□□□□□ -0.92
PAX6-272ENST00000640460 NHLRC4P0CG21 123 aaPredicted RBP9.34□□□□□ -0.92
PAX6-272ENST00000640460 TFPI2P48307 235 aa9.34□□□□□ -0.92
PAX6-272ENST00000640460 UBE2G1P62253 170 aa9.34□□□□□ -0.92
PAX6-272ENST00000640460 LINC00322Q6ZN03 302 aaPredicted RBP9.34□□□□□ -0.92
PAX6-272ENST00000640460 SBSPONQ8IVN8 264 aa9.34□□□□□ -0.92
PAX6-272ENST00000640460 RNF182Q8N6D2 247 aa9.34□□□□□ -0.92
PAX6-272ENST00000640460 FMC1Q96HJ9 113 aa9.34□□□□□ -0.92
PAX6-272ENST00000640460 WFDC10AQ9H1F0 79 aa9.34□□□□□ -0.92
PAX6-272ENST00000640460 MS4A6AQ9H2W1 248 aa9.34□□□□□ -0.92
PAX6-272ENST00000640460 AAMDCQ9H7C9 122 aa9.34□□□□□ -0.92
PAX6-272ENST00000640460 C19orf73Q9NVV2 129 aa9.34□□□□□ -0.92
PAX6-272ENST00000640460 PRELID1Q9Y255 219 aa9.34□□□□□ -0.92
PAX6-272ENST00000640460 OR4C46A6NHA9 309 aa9.33□□□□□ -0.92
PAX6-272ENST00000640460 PRAC2D3DTV9 90 aa9.33□□□□□ -0.92
PAX6-272ENST00000640460 OR10G8Q8NGN5 311 aa9.33□□□□□ -0.92
PAX6-272ENST00000640460 V9GYV3 84 aa9.33□□□□□ -0.92
PAX6-272ENST00000640460 NBEAL2Q6ZNJ1 2754 aa9.33□□□□□ -0.92
PAX6-272ENST00000640460 TRBV6-1A0A0K0K1D8 114 aa9.32□□□□□ -0.92
PAX6-272ENST00000640460 SOCS3O14543 225 aa9.32□□□□□ -0.92
PAX6-272ENST00000640460 S100A9P06702 114 aaKnown RBP9.32□□□□□ -0.92
PAX6-272ENST00000640460 IGHV4-30-4P0DP06 118 aa9.32□□□□□ -0.92
PAX6-272ENST00000640460 MGST1P10620 155 aaKnown RBP9.32□□□□□ -0.92
PAX6-272ENST00000640460 PSG3Q16557 428 aa9.32□□□□□ -0.92
PAX6-272ENST00000640460 ODF3L2Q3SX64 289 aa9.32□□□□□ -0.92
PAX6-272ENST00000640460 PRNTQ86SH4 94 aa9.32□□□□□ -0.92
PAX6-272ENST00000640460 WFDC3Q8IUB2 231 aa9.32□□□□□ -0.92
PAX6-272ENST00000640460 TMEM75Q8N9X5 138 aa9.32□□□□□ -0.92
PAX6-272ENST00000640460 U3KQK5 164 aa9.32□□□□□ -0.92
PAX6-272ENST00000640460 IGKV2-40A0A087WW87 121 aaPredicted RBP9.31□□□□□ -0.92
PAX6-272ENST00000640460 OR11H12B2RN74 326 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 IGKV2D-40P01614 121 aaPredicted RBP9.31□□□□□ -0.92
PAX6-272ENST00000640460 RAB5AP20339 215 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 FAM3BP58499 235 aaPredicted RBP9.31□□□□□ -0.92
PAX6-272ENST00000640460 ERVFC1-1P60608 527 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 PAFAH1B2P68402 229 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 Q86TA4 180 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 DEFB125Q8N687 156 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 ARL6IP6Q8N6S5 226 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 DCANP1Q8TF63 244 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 PYGO2Q9BRQ0 406 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 SLC50A1Q9BRV3 221 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 OSTCQ9NRP0 149 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 PSG8Q9UQ74 426 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 A8MZ25 164 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 K7EQG2 157 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 PPP1R2P9O14990 202 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 FLI1Q01543 452 aaPredicted RBP9.31□□□□□ -0.92
PAX6-272ENST00000640460 TMEM183AQ8IXX5 376 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 NUDT10Q8NFP7 164 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 SMIM12Q96EX1 92 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 NUDT11Q96G61 164 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 C20orf173Q96LM9 149 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 VGLL1Q99990 258 aa9.31□□□□□ -0.92
PAX6-272ENST00000640460 TRBV24-1A0A075B6N3 115 aa9.3□□□□□ -0.92
PAX6-272ENST00000640460 TRAV2A0A0B4J234 112 aa9.3□□□□□ -0.92
PAX6-272ENST00000640460 CSN1S1P47710 185 aa9.3□□□□□ -0.92
PAX6-272ENST00000640460 MEOX2P50222 304 aa9.3□□□□□ -0.92
PAX6-272ENST00000640460 IBA57Q5T440 356 aaKnown RBP9.3□□□□□ -0.92
PAX6-272ENST00000640460 NRN1Q9NPD7 142 aa9.3□□□□□ -0.92
PAX6-272ENST00000640460 CRIP1P50238 77 aa9.29□□□□□ -0.92
PAX6-272ENST00000640460 ZNF124Q15973 351 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms