RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 C6orf226Q5I0X4 101 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 NUP35Q8NFH5 326 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 HIVEP2P31629 2446 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 ANKHD1Q8IWZ3 2542 aaKnown RBP8.75□□□□□ -1.01
SCN1B-208ENST00000640135 IGKV1-39P01597 117 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 IGKV1D-39P04432 117 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 GFI1BQ5VTD9 330 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 DMRTA1Q5VZB9 504 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 LY6G5BQ8NDX9 201 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 C1orf159Q96HA4 380 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 YLPM1P49750 1951 aaKnown RBP8.74□□□□□ -1.01
SCN1B-208ENST00000640135 HOXD3P31249 432 aaPredicted RBP8.74□□□□□ -1.01
SCN1B-208ENST00000640135 PLP1P60201 277 aa8.74□□□□□ -1.01
SCN1B-208ENST00000640135 S100A7L2Q5SY68 101 aa8.74□□□□□ -1.01
SCN1B-208ENST00000640135 LSM4Q9Y4Z0 139 aaKnown RBP8.74□□□□□ -1.01
SCN1B-208ENST00000640135 DOCK9Q9BZ29 2069 aa8.74□□□□□ -1.01
SCN1B-208ENST00000640135 TRBV25-1A0A075B6N4 114 aa8.74□□□□□ -1.01
SCN1B-208ENST00000640135 C10orf91Q5T1B1 145 aa8.74□□□□□ -1.01
SCN1B-208ENST00000640135 ST6GALNAC6Q969X2 333 aa8.74□□□□□ -1.01
SCN1B-208ENST00000640135 RIPPLY3P57055 190 aa8.74□□□□□ -1.01
SCN1B-208ENST00000640135 TP53BP1Q12888 1972 aaPredicted RBP8.74□□□□□ -1.01
SCN1B-208ENST00000640135 AZU1P20160 251 aa8.74□□□□□ -1.01
SCN1B-208ENST00000640135 JPT2Q9H910 190 aa8.74□□□□□ -1.01
SCN1B-208ENST00000640135 TPSG1Q9NRR2 321 aa8.74□□□□□ -1.01
SCN1B-208ENST00000640135 ARFGEF3Q5TH69 2177 aa8.73□□□□□ -1.01
SCN1B-208ENST00000640135 SPG11Q96JI7 2443 aa8.73□□□□□ -1.01
SCN1B-208ENST00000640135 DERL1Q9BUN8 251 aa8.73□□□□□ -1.01
SCN1B-208ENST00000640135 ZNF815PA8K554 130 aa8.73□□□□□ -1.01
SCN1B-208ENST00000640135 PRSS57Q6UWY2 283 aa8.73□□□□□ -1.01
SCN1B-208ENST00000640135 RNF152Q8N8N0 203 aa8.73□□□□□ -1.01
SCN1B-208ENST00000640135 OR2K2Q8NGT1 345 aa8.73□□□□□ -1.01
SCN1B-208ENST00000640135 PAX9P55771 341 aa8.73□□□□□ -1.01
SCN1B-208ENST00000640135 SRSF3P84103 164 aaKnown RBP8.73□□□□□ -1.01
SCN1B-208ENST00000640135 PLXND1Q9Y4D7 1925 aa8.73□□□□□ -1.01
SCN1B-208ENST00000640135 PRSS46E5RG02 174 aa8.73□□□□□ -1.01
SCN1B-208ENST00000640135 NCR2O95944 276 aa8.73□□□□□ -1.01
SCN1B-208ENST00000640135 IGHV4-38-2P0DP08 117 aa8.73□□□□□ -1.01
SCN1B-208ENST00000640135 DIAPH2-AS1Q14236 149 aa8.73□□□□□ -1.01
SCN1B-208ENST00000640135 PRR25Q96S07 402 aa8.73□□□□□ -1.01
SCN1B-208ENST00000640135 IGLC7A0M8Q6 106 aa8.72□□□□□ -1.01
SCN1B-208ENST00000640135 MYCNOSP40205 109 aa8.72□□□□□ -1.01
SCN1B-208ENST00000640135 PYY3Q5JQD4 70 aa8.72□□□□□ -1.01
SCN1B-208ENST00000640135 MRPL52Q86TS9 123 aaKnown RBP8.72□□□□□ -1.01
SCN1B-208ENST00000640135 ZNF491Q8N8L2 437 aa8.72□□□□□ -1.01
SCN1B-208ENST00000640135 ZNF114Q8NC26 417 aa8.72□□□□□ -1.01
SCN1B-208ENST00000640135 COL4A4P53420 1690 aaPredicted RBP8.72□□□□□ -1.01
SCN1B-208ENST00000640135 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.72□□□□□ -1.01
SCN1B-208ENST00000640135 DLEU1O43261 78 aa8.71□□□□□ -1.01
SCN1B-208ENST00000640135 PYGO2Q9BRQ0 406 aa8.71□□□□□ -1.01
SCN1B-208ENST00000640135 A0A087WWL8 130 aa8.71□□□□□ -1.01
SCN1B-208ENST00000640135 MYMXA0A1B0GTQ4 84 aa8.71□□□□□ -1.01
SCN1B-208ENST00000640135 CLPSL1A2RUU4 121 aa8.71□□□□□ -1.01
SCN1B-208ENST00000640135 IGFBPL1Q8WX77 278 aa8.71□□□□□ -1.01
SCN1B-208ENST00000640135 CD300EQ496F6 205 aaPredicted RBP8.71□□□□□ -1.02
SCN1B-208ENST00000640135 IGHV7-81A0A0B4J1V7 117 aa8.71□□□□□ -1.02
SCN1B-208ENST00000640135 TYMSP04818 313 aa8.71□□□□□ -1.02
SCN1B-208ENST00000640135 FAM231DQ6ZW35 169 aa8.71□□□□□ -1.02
SCN1B-208ENST00000640135 TRAV25A0A0B4J276 109 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 FSTL3O95633 263 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 ZNF493Q6ZR52 646 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 C5orf30Q96GV9 206 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 CST9LQ9H4G1 147 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 GAGE12BA1L429 117 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 RBAKDNA6NC62 111 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 HIST1H2BKO60814 126 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 GAGE7O76087 117 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 HIST1H2BJP06899 126 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 GAGE12FP0CL80 117 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 GAGE12GP0CL81 117 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 GAGE12IP0CL82 117 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 HIST1H2BOP23527 126 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 HIST1H2BBP33778 126 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 INSL3P51460 131 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 HIST1H2BDP58876 126 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 HIST1H2BCP62807 126 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 HIST2H2BEQ16778 126 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.7□□□□□ -1.02
SCN1B-208ENST00000640135 HIST1H2BHQ93079 126 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 HIST1H2BNQ99877 126 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 HIST1H2BMQ99879 126 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 PKIGQ9Y2B9 76 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 I3L3M4 83 aa8.7□□□□□ -1.02
SCN1B-208ENST00000640135 TRAV2A0A0B4J234 112 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 GAGE12JA6NER3 117 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 ADCYAP1P18509 176 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 GAGE1Q13065 139 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 GAGE4Q13068 117 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 GAGE5Q13069 117 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 GAGE13Q4V321 117 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 TMEM141Q96I45 108 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 TMEM243Q9BU79 118 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 KNCNA6PVL3 124 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 ZNF561-AS1K7EIQ3 104 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 PAX4O43316 350 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 GP9P14770 177 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 AMN1Q8IY45 258 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 PHLDA1Q8WV24 401 aaPredicted RBP8.69□□□□□ -1.02
SCN1B-208ENST00000640135 PGPEP1Q9NXJ5 209 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 TRAV13-1A0A0B4J241 112 aa8.69□□□□□ -1.02
SCN1B-208ENST00000640135 SSBP2P81877 361 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms