RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ACOT6Q3I5F7 207 aaPredicted RBP6.07□□□□□ -1.44
SCARB2-220ENST00000640076 C18orf65Q6ZTR6 163 aa6.07□□□□□ -1.44
SCARB2-220ENST00000640076 RPP25LQ8N5L8 163 aaKnown RBP6.07□□□□□ -1.44
SCARB2-220ENST00000640076 Q8WTZ3 238 aa6.07□□□□□ -1.44
SCARB2-220ENST00000640076 C4orf3Q8WVX3 66 aa6.07□□□□□ -1.44
SCARB2-220ENST00000640076 MSRB1Q9NZV6 116 aa6.07□□□□□ -1.44
SCARB2-220ENST00000640076 TINCRA0A1B0GVN0 87 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 WI2-2373I1.2A0A1W2PRP0 233 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 GGCTO75223 188 aaKnown RBP6.06□□□□□ -1.44
SCARB2-220ENST00000640076 IL4P05112 153 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 ORM2P19652 201 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 KRTAP10-3P60369 221 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 LYZP61626 148 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 KRTAP24-1Q3LI83 254 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 TOMM20LQ6UXN7 152 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 PATE2Q6UY27 113 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 MAPKAPK5-AS1Q8N8E1 139 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 PRR26Q8N8Z3 221 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 OR10G4Q8NGN3 311 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 OR10G9Q8NGN4 311 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 OR10G7Q8NGN6 311 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 FAM213BQ8TBF2 198 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 DOK5Q9P104 306 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 STAB1Q9NY15 2570 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 ZNF705EA8MWA4 302 aaPredicted RBP6.06□□□□□ -1.44
SCARB2-220ENST00000640076 SEC14L6B5MCN3 397 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 COX7A2P2O60397 106 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 ZNF726P1Q15940 193 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 DPPA3Q6W0C5 159 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 KLHL30-AS1Q8NEE0 82 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 GATAD1Q8WUU5 269 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 PCNPQ8WW12 178 aaKnown RBP6.06□□□□□ -1.44
SCARB2-220ENST00000640076 PBDC1Q9BVG4 233 aa6.06□□□□□ -1.44
SCARB2-220ENST00000640076 IGHV4OR15-8A0A075B7B6 117 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 IGHV3OR16-8A0A075B7F1 116 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 A0A087WW49 117 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 IGHV4-28A0A0C4DH34 117 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 NDUFA4O00483 81 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 PDE6DO43924 150 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 HYPMO75409 117 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 HSPB1P04792 205 aaKnown RBP6.05□□□□□ -1.44
SCARB2-220ENST00000640076 NMBP08949 121 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 OR5G3P0C626 314 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 DEFB136Q30KP8 78 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 RNF212Q495C1 297 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 FAM78BQ5VT40 261 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 SAMD13Q5VXD3 122 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 C10orf113Q5VZT2 155 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 NIT1Q86X76 327 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 NEXN-AS1Q8NBZ9 246 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 C19orf24Q9BVV8 132 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 SLC25A22Q9H936 323 aa6.05□□□□□ -1.44
SCARB2-220ENST00000640076 MRPL27Q9P0M9 148 aaKnown RBP6.05□□□□□ -1.44
SCARB2-220ENST00000640076 RHOBP62745 196 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 MORN5Q5VZ52 161 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 SPATA31B1PQ5VZV4 182 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 UNQ9165/PRO28630Q6UXU0 137 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 MIR17HGQ75NE6 70 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 GPHB5Q86YW7 130 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 TMEM190Q8WZ59 177 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 SS18L2Q9UHA2 77 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 FUT9Q9Y231 359 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 HIGD1AQ9Y241 93 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 CTXND1A0A1B0GTU2 59 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 HMGB3O15347 200 aaKnown RBP6.04□□□□□ -1.44
SCARB2-220ENST00000640076 IFNA1P01562 189 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 HOXD3P31249 432 aaPredicted RBP6.04□□□□□ -1.44
SCARB2-220ENST00000640076 LEPP41159 167 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 CLLU1Q5K131 121 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 LINC00305Q7Z4B0 112 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 OR1N2Q8NGR9 330 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 MBD3L1Q8WWY6 194 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 LINC00476Q8WZB0 136 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 C20orf173Q96LM9 149 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 WWC2-AS2Q96NR7 200 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 MRPL32Q9BYC8 188 aaKnown RBP6.04□□□□□ -1.44
SCARB2-220ENST00000640076 MAP1LC3AQ9H492 121 aa6.04□□□□□ -1.44
SCARB2-220ENST00000640076 MAP1LC3B2A6NCE7 125 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 LINC01619G3V211 115 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 GAGE7O76087 117 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 GAGE12FP0CL80 117 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 GAGE12GP0CL81 117 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 GAGE12IP0CL82 117 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 GAGE4Q13068 117 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 FAM106AQ4KMX7 169 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 LCN15Q6UWW0 184 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 NDUFA11Q86Y39 141 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 SFT2D1Q8WV19 159 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 DLX4Q92988 240 aaPredicted RBP6.03□□□□□ -1.44
SCARB2-220ENST00000640076 FAM167A-AS1Q96KT0 104 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 DUX3Q96PT4 197 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 SHANK2-AS3Q9BTD1 123 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 SCRT1Q9BWW7 348 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 SLC25A39Q9BZJ4 359 aaPredicted RBP6.03□□□□□ -1.44
SCARB2-220ENST00000640076 MAP1LC3BQ9GZQ8 125 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 SPANXB1Q9NS25 103 aaPredicted RBP6.03□□□□□ -1.44
SCARB2-220ENST00000640076 RABAC1Q9UI14 185 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 VWFP04275 2813 aa6.03□□□□□ -1.44
SCARB2-220ENST00000640076 TRAV1-1A0A0B4J248 108 aa6.02□□□□□ -1.45
SCARB2-220ENST00000640076 TRAV5A0A0B4J249 113 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms