RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 TRAV2A0A0B4J234 112 aa13.24□□□□□ -0.29
SCARB2-210ENST00000638567 CHAC1Q9BUX1 264 aa13.24□□□□□ -0.29
SCARB2-210ENST00000638567 PATE2Q6UY27 113 aa13.24□□□□□ -0.29
SCARB2-210ENST00000638567 LINC00477Q96M19 166 aa13.24□□□□□ -0.29
SCARB2-210ENST00000638567 SIGLEC8Q9NYZ4 499 aa13.24□□□□□ -0.29
SCARB2-210ENST00000638567 KAAG1Q9UBP8 84 aa13.23□□□□□ -0.29
SCARB2-210ENST00000638567 FCN3O75636 299 aa13.23□□□□□ -0.29
SCARB2-210ENST00000638567 PLNP26678 52 aa13.23□□□□□ -0.29
SCARB2-210ENST00000638567 ZNF491Q8N8L2 437 aa13.23□□□□□ -0.29
SCARB2-210ENST00000638567 IGKV3D-20A0A0C4DH25 116 aa13.23□□□□□ -0.29
SCARB2-210ENST00000638567 PROP1O75360 226 aa13.23□□□□□ -0.29
SCARB2-210ENST00000638567 LTAP01374 205 aa13.23□□□□□ -0.29
SCARB2-210ENST00000638567 TMEM8BA6NDV4 472 aa13.23□□□□□ -0.29
SCARB2-210ENST00000638567 K7EM74 188 aa13.23□□□□□ -0.29
SCARB2-210ENST00000638567 IL17RELQ6ZVW7 336 aa13.23□□□□□ -0.29
SCARB2-210ENST00000638567 PLXNB1O43157 2135 aa13.22□□□□□ -0.29
SCARB2-210ENST00000638567 MSMPQ1L6U9 139 aa13.22□□□□□ -0.29
SCARB2-210ENST00000638567 WIPF2Q8TF74 440 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-210ENST00000638567 TRAV12-3A0A0B4J271 114 aa13.22□□□□□ -0.29
SCARB2-210ENST00000638567 EMP1P54849 157 aa13.22□□□□□ -0.29
SCARB2-210ENST00000638567 BRWD1-AS2P59051 145 aa13.22□□□□□ -0.29
SCARB2-210ENST00000638567 CSTL1Q9H114 145 aa13.22□□□□□ -0.29
SCARB2-210ENST00000638567 P0C879 139 aa13.22□□□□□ -0.29
SCARB2-210ENST00000638567 CST9LQ9H4G1 147 aa13.22□□□□□ -0.29
SCARB2-210ENST00000638567 NPYP01303 97 aa13.21□□□□□ -0.29
SCARB2-210ENST00000638567 GAGE1Q13065 139 aa13.21□□□□□ -0.29
SCARB2-210ENST00000638567 KMT2EQ8IZD2 1858 aa13.21□□□□□ -0.29
SCARB2-210ENST00000638567 FAM167A-AS1Q96KT0 104 aa13.21□□□□□ -0.29
SCARB2-210ENST00000638567 DUSP14O95147 198 aaKnown RBP13.21□□□□□ -0.3
SCARB2-210ENST00000638567 COX8AP10176 69 aa13.21□□□□□ -0.3
SCARB2-210ENST00000638567 SIGMAR1Q99720 223 aa13.21□□□□□ -0.3
SCARB2-210ENST00000638567 RHPN1-AS1Q9BWJ2 59 aa13.21□□□□□ -0.3
SCARB2-210ENST00000638567 PIEZO1Q92508 2521 aa13.21□□□□□ -0.3
SCARB2-210ENST00000638567 VGLL1Q99990 258 aa13.2□□□□□ -0.3
SCARB2-210ENST00000638567 C22orf46C9J442 243 aa13.2□□□□□ -0.3
SCARB2-210ENST00000638567 CD28P10747 220 aa13.2□□□□□ -0.3
SCARB2-210ENST00000638567 OCIAD2Q56VL3 154 aa13.2□□□□□ -0.3
SCARB2-210ENST00000638567 FAM120AOSQ5T036 256 aa13.2□□□□□ -0.3
SCARB2-210ENST00000638567 IGFL2Q6UWQ7 119 aa13.2□□□□□ -0.3
SCARB2-210ENST00000638567 FAM110DQ8TAY7 271 aaPredicted RBP13.2□□□□□ -0.3
SCARB2-210ENST00000638567 IGFBPL1Q8WX77 278 aa13.2□□□□□ -0.3
SCARB2-210ENST00000638567 TRAV8-2A0A0B4J237 113 aa13.19□□□□□ -0.3
SCARB2-210ENST00000638567 IGF2RP11717 2491 aa13.19□□□□□ -0.3
SCARB2-210ENST00000638567 OVOL3O00110 214 aa13.19□□□□□ -0.3
SCARB2-210ENST00000638567 PIP4P1Q86T03 277 aa13.19□□□□□ -0.3
SCARB2-210ENST00000638567 RITA1Q96K30 269 aa13.19□□□□□ -0.3
SCARB2-210ENST00000638567 WNK1Q9H4A3 2382 aa13.19□□□□□ -0.3
SCARB2-210ENST00000638567 A0A087WWL8 130 aa13.19□□□□□ -0.3
SCARB2-210ENST00000638567 KLF5Q13887 457 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-210ENST00000638567 ZNF876PQ49A33 203 aa13.19□□□□□ -0.3
SCARB2-210ENST00000638567 COPS9Q8WXC6 57 aa13.19□□□□□ -0.3
SCARB2-210ENST00000638567 PRSS22Q9GZN4 317 aa13.19□□□□□ -0.3
SCARB2-210ENST00000638567 TLN1Q9Y490 2541 aaKnown RBP13.19□□□□□ -0.3
SCARB2-210ENST00000638567 NCOR2Q9Y618 2525 aa13.19□□□□□ -0.3
SCARB2-210ENST00000638567 H3BRM9 83 aa13.19□□□□□ -0.3
SCARB2-210ENST00000638567 LINC00173Q6ZV60 143 aa13.18□□□□□ -0.3
SCARB2-210ENST00000638567 TOMM7Q9P0U1 55 aa13.18□□□□□ -0.3
SCARB2-210ENST00000638567 E7EUB6 86 aa13.18□□□□□ -0.3
SCARB2-210ENST00000638567 HLA-DMBP28068 263 aa13.18□□□□□ -0.3
SCARB2-210ENST00000638567 LGALS9BQ3B8N2 356 aa13.18□□□□□ -0.3
SCARB2-210ENST00000638567 LGALS9CQ6DKI2 356 aa13.18□□□□□ -0.3
SCARB2-210ENST00000638567 IGF2BP2-AS1Q96M15 143 aa13.18□□□□□ -0.3
SCARB2-210ENST00000638567 MUC22E2RYF6 1773 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-210ENST00000638567 IGHV4-39P01824 125 aa13.18□□□□□ -0.3
SCARB2-210ENST00000638567 BVES-AS1Q5T3Y7 98 aa13.18□□□□□ -0.3
SCARB2-210ENST00000638567 ZNF747Q9BV97 191 aa13.18□□□□□ -0.3
SCARB2-210ENST00000638567 A0A0U1RRA0 63 aa13.17□□□□□ -0.3
SCARB2-210ENST00000638567 VCYO14598 125 aa13.17□□□□□ -0.3
SCARB2-210ENST00000638567 SEM1Q6ZVN7 128 aa13.17□□□□□ -0.3
SCARB2-210ENST00000638567 MRPL36Q9P0J6 103 aaKnown RBP13.17□□□□□ -0.3
SCARB2-210ENST00000638567 TRAV26-2A0A0B4J265 109 aa13.17□□□□□ -0.3
SCARB2-210ENST00000638567 IGKV1-17P01599 117 aa13.17□□□□□ -0.3
SCARB2-210ENST00000638567 UBE2E1P51965 193 aa13.17□□□□□ -0.3
SCARB2-210ENST00000638567 LCNL1Q6ZST4 164 aa13.17□□□□□ -0.3
SCARB2-210ENST00000638567 PRSS33Q8NF86 280 aa13.17□□□□□ -0.3
SCARB2-210ENST00000638567 IGHV3-73A0A0B4J1V6 119 aa13.17□□□□□ -0.3
SCARB2-210ENST00000638567 GP9P14770 177 aa13.17□□□□□ -0.3
SCARB2-210ENST00000638567 RUSC1-AS1Q66K80 236 aa13.17□□□□□ -0.3
SCARB2-210ENST00000638567 OR13C6PQ8NH95 151 aa13.17□□□□□ -0.3
SCARB2-210ENST00000638567 LINC01549A6NIU2 74 aa13.16□□□□□ -0.3
SCARB2-210ENST00000638567 A8MWV9 139 aa13.16□□□□□ -0.3
SCARB2-210ENST00000638567 K7ENP7 123 aa13.16□□□□□ -0.3
SCARB2-210ENST00000638567 DNAL4O96015 105 aa13.16□□□□□ -0.3
SCARB2-210ENST00000638567 C8orf31Q8N9H6 132 aa13.16□□□□□ -0.3
SCARB2-210ENST00000638567 SPOCK3Q9BQ16 436 aa13.16□□□□□ -0.3
SCARB2-210ENST00000638567 A0A1W2PRX2 142 aa13.16□□□□□ -0.3
SCARB2-210ENST00000638567 MTURNQ8N3F0 131 aa13.16□□□□□ -0.3
SCARB2-210ENST00000638567 GTSF1LQ9H1H1 148 aa13.16□□□□□ -0.3
SCARB2-210ENST00000638567 PGPEP1Q9NXJ5 209 aa13.16□□□□□ -0.3
SCARB2-210ENST00000638567 UTF1Q5T230 341 aa13.16□□□□□ -0.3
SCARB2-210ENST00000638567 C8orf86Q6ZUL3 223 aa13.16□□□□□ -0.3
SCARB2-210ENST00000638567 TRGV11A0A075B6L2 103 aa13.15□□□□□ -0.3
SCARB2-210ENST00000638567 Q8N8P6 123 aa13.15□□□□□ -0.3
SCARB2-210ENST00000638567 USMG5Q96IX5 58 aa13.15□□□□□ -0.3
SCARB2-210ENST00000638567 PTPN13Q12923 2485 aa13.15□□□□□ -0.3
SCARB2-210ENST00000638567 FAM223BA6NKX1 122 aa13.15□□□□□ -0.3
SCARB2-210ENST00000638567 SHISA9B4DS77 424 aa13.15□□□□□ -0.3
SCARB2-210ENST00000638567 C2orf66Q6UXQ4 117 aa13.15□□□□□ -0.3
SCARB2-210ENST00000638567 FAM223AQ8IWN6 122 aa13.15□□□□□ -0.3
SCARB2-210ENST00000638567 YPEL4Q96NS1 127 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms