RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SLC25A5P05141 298 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-259ENST00000638114 C15orf53Q8NAA6 179 aa11.81□□□□□ -0.52
CACNA1A-259ENST00000638114 PHYHIPLQ96FC7 376 aa11.81□□□□□ -0.52
CACNA1A-259ENST00000638114 AGPAT4-IT1Q9H0P7 198 aa11.81□□□□□ -0.52
CACNA1A-259ENST00000638114 C7orf71A4D174 169 aa11.8□□□□□ -0.52
CACNA1A-259ENST00000638114 SNURFLB1AK76 121 aa11.8□□□□□ -0.52
CACNA1A-259ENST00000638114 M0R2N4 97 aa11.8□□□□□ -0.52
CACNA1A-259ENST00000638114 UBE2L3P68036 154 aaKnown RBP11.8□□□□□ -0.52
CACNA1A-259ENST00000638114 TMEM78Q5T7P6 136 aa11.8□□□□□ -0.52
CACNA1A-259ENST00000638114 PYGO2Q9BRQ0 406 aa11.8□□□□□ -0.52
CACNA1A-259ENST00000638114 WFDC1Q9HC57 220 aa11.8□□□□□ -0.52
CACNA1A-259ENST00000638114 TAS2R45P59539 299 aa11.79□□□□□ -0.52
CACNA1A-259ENST00000638114 BTN1A1Q13410 526 aa11.79□□□□□ -0.52
CACNA1A-259ENST00000638114 KHDC3LQ587J8 217 aa11.79□□□□□ -0.52
CACNA1A-259ENST00000638114 C9orf47Q6ZRZ4 202 aa11.79□□□□□ -0.52
CACNA1A-259ENST00000638114 ZNF503Q96F45 646 aa11.79□□□□□ -0.52
CACNA1A-259ENST00000638114 FAM19A4Q96LR4 140 aa11.79□□□□□ -0.52
CACNA1A-259ENST00000638114 VGLL1Q99990 258 aa11.79□□□□□ -0.52
CACNA1A-259ENST00000638114 MED28Q9H204 178 aa11.79□□□□□ -0.52
CACNA1A-259ENST00000638114 IGLV2-18A0A075B6J9 118 aa11.78□□□□□ -0.52
CACNA1A-259ENST00000638114 GAGE12BA1L429 117 aa11.78□□□□□ -0.52
CACNA1A-259ENST00000638114 KLLNB2CW77 178 aa11.78□□□□□ -0.52
CACNA1A-259ENST00000638114 GAGE7O76087 117 aa11.78□□□□□ -0.52
CACNA1A-259ENST00000638114 NUDT3O95989 172 aa11.78□□□□□ -0.52
CACNA1A-259ENST00000638114 GAGE12FP0CL80 117 aa11.78□□□□□ -0.52
CACNA1A-259ENST00000638114 GAGE12GP0CL81 117 aa11.78□□□□□ -0.52
CACNA1A-259ENST00000638114 GAGE12IP0CL82 117 aa11.78□□□□□ -0.52
CACNA1A-259ENST00000638114 RNASE4P34096 147 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-259ENST00000638114 RANP62826 216 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-259ENST00000638114 CD300CQ08708 224 aa11.78□□□□□ -0.52
CACNA1A-259ENST00000638114 RNF212Q495C1 297 aa11.78□□□□□ -0.52
CACNA1A-259ENST00000638114 EIF3GO75821 320 aaKnown RBP eCLIP11.77□□□□□ -0.53
CACNA1A-259ENST00000638114 GPX1P07203 203 aa11.77□□□□□ -0.53
CACNA1A-259ENST00000638114 CRISP2P16562 243 aa11.77□□□□□ -0.53
CACNA1A-259ENST00000638114 CSN1S1P47710 185 aa11.77□□□□□ -0.53
CACNA1A-259ENST00000638114 ACOT6Q3I5F7 207 aaPredicted RBP11.77□□□□□ -0.53
CACNA1A-259ENST00000638114 ATG101Q9BSB4 218 aa11.77□□□□□ -0.53
CACNA1A-259ENST00000638114 Q9H3A6 140 aa11.77□□□□□ -0.53
CACNA1A-259ENST00000638114 LYPD1Q8N2G4 141 aa11.76□□□□□ -0.53
CACNA1A-259ENST00000638114 ZFAND2AQ8N6M9 145 aa11.76□□□□□ -0.53
CACNA1A-259ENST00000638114 LINC00612Q8N6U2 182 aa11.76□□□□□ -0.53
CACNA1A-259ENST00000638114 Q8TAT8 98 aa11.76□□□□□ -0.53
CACNA1A-259ENST00000638114 ZNF492Q9P255 531 aa11.76□□□□□ -0.53
CACNA1A-259ENST00000638114 HECTD4Q9Y4D8 3996 aa11.76□□□□□ -0.53
CACNA1A-259ENST00000638114 A0A1W2PPV4 95 aa11.75□□□□□ -0.53
CACNA1A-259ENST00000638114 ZNF324O75467 553 aaPredicted RBP11.75□□□□□ -0.53
CACNA1A-259ENST00000638114 NMBP08949 121 aa11.75□□□□□ -0.53
CACNA1A-259ENST00000638114 M6PRP20645 277 aa11.75□□□□□ -0.53
CACNA1A-259ENST00000638114 ZNF138P52744 262 aa11.75□□□□□ -0.53
CACNA1A-259ENST00000638114 OR5I1Q13606 314 aa11.75□□□□□ -0.53
CACNA1A-259ENST00000638114 LGALS9BQ3B8N2 356 aa11.75□□□□□ -0.53
CACNA1A-259ENST00000638114 PRR9Q5T870 116 aa11.75□□□□□ -0.53
CACNA1A-259ENST00000638114 EIF4E3Q8N5X7 224 aaKnown RBP11.75□□□□□ -0.53
CACNA1A-259ENST00000638114 ZNF680Q8NEM1 530 aa11.75□□□□□ -0.53
CACNA1A-259ENST00000638114 GSN-AS1Q9NRJ2 163 aa11.75□□□□□ -0.53
CACNA1A-259ENST00000638114 NACAE9PAV3 2078 aa11.75□□□□□ -0.53
CACNA1A-259ENST00000638114 RGS13O14921 159 aa11.74□□□□□ -0.53
CACNA1A-259ENST00000638114 RAB2AP61019 212 aa11.74□□□□□ -0.53
CACNA1A-259ENST00000638114 DAZ2Q13117 558 aaKnown RBP11.74□□□□□ -0.53
CACNA1A-259ENST00000638114 LINC00336Q6ZUF6 198 aa11.74□□□□□ -0.53
CACNA1A-259ENST00000638114 LINC00467Q9BRT7 94 aa11.74□□□□□ -0.53
CACNA1A-259ENST00000638114 RBAKDNA6NC62 111 aa11.73□□□□□ -0.53
CACNA1A-259ENST00000638114 ZNF266Q14584 549 aa11.73□□□□□ -0.53
CACNA1A-259ENST00000638114 ANXA2RQ3ZCQ2 193 aa11.73□□□□□ -0.53
CACNA1A-259ENST00000638114 Q6ZTI0 123 aa11.73□□□□□ -0.53
CACNA1A-259ENST00000638114 HSD17B11Q8NBQ5 300 aa11.73□□□□□ -0.53
CACNA1A-259ENST00000638114 C11orf72Q8NBR9 251 aa11.73□□□□□ -0.53
CACNA1A-259ENST00000638114 HYLS1Q96M11 299 aa11.73□□□□□ -0.53
CACNA1A-259ENST00000638114 AQP10Q96PS8 301 aa11.73□□□□□ -0.53
CACNA1A-259ENST00000638114 TRAV26-1A0A087WT03 109 aa11.72□□□□□ -0.53
CACNA1A-259ENST00000638114 HMGB3O15347 200 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-259ENST00000638114 FAM3BP58499 235 aaPredicted RBP11.72□□□□□ -0.53
CACNA1A-259ENST00000638114 PQLC2Q6ZP29 291 aa11.72□□□□□ -0.53
CACNA1A-259ENST00000638114 Q6ZQT7 251 aa11.72□□□□□ -0.53
CACNA1A-259ENST00000638114 OR10G4Q8NGN3 311 aa11.72□□□□□ -0.53
CACNA1A-259ENST00000638114 OR10G9Q8NGN4 311 aa11.72□□□□□ -0.53
CACNA1A-259ENST00000638114 OR10G7Q8NGN6 311 aa11.72□□□□□ -0.53
CACNA1A-259ENST00000638114 CMTM2Q8TAZ6 248 aa11.72□□□□□ -0.53
CACNA1A-259ENST00000638114 RXFP4Q8TDU9 374 aa11.72□□□□□ -0.53
CACNA1A-259ENST00000638114 GNPNAT1Q96EK6 184 aaPredicted RBP11.72□□□□□ -0.53
CACNA1A-259ENST00000638114 TMPRSS5Q9H3S3 457 aa11.72□□□□□ -0.53
CACNA1A-259ENST00000638114 RPH3ALQ9UNE2 315 aa11.72□□□□□ -0.53
CACNA1A-259ENST00000638114 DNAH2Q9P225 4427 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 TRGV2A0A075B6R0 118 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 IGHV1OR15-1A0A075B7D0 117 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 TRGV1A0A0A0MS02 117 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 TRBV7-9A0A0J9YWB2 115 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 A0A0J9YY99 117 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 PGPA6NDG6 321 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 DIRC3C9JPN6 131 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 GIPP09681 153 aaPredicted RBP11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 HOXA5P20719 270 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 FAM74A1Q5RGS3 127 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 Q6ZR54 194 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 ARPC5LQ9BPX5 153 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 OTORQ9NRC9 128 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 TP53TG3Q9ULZ0 132 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 KLF12Q9Y4X4 402 aa11.71□□□□□ -0.53
CACNA1A-259ENST00000638114 RTL8CO15255 209 aa11.7□□□□□ -0.54
CACNA1A-259ENST00000638114 CCL18P55774 89 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms