RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 ERG28Q9UKR5 140 aa12.64□□□□□ -0.39
CLN5-218ENST00000637397 MOB4Q9Y3A3 225 aa12.64□□□□□ -0.39
CLN5-218ENST00000637397 BRD3OSQ6XYD6 125 aa12.64□□□□□ -0.39
CLN5-218ENST00000637397 DYSFO75923 2080 aa12.64□□□□□ -0.39
CLN5-218ENST00000637397 IGKV1OR2-108A0A075B7D4 117 aa12.63□□□□□ -0.39
CLN5-218ENST00000637397 H3BRN7 92 aa12.63□□□□□ -0.39
CLN5-218ENST00000637397 IL17RELQ6ZVW7 336 aa12.63□□□□□ -0.39
CLN5-218ENST00000637397 DLX4Q92988 240 aaPredicted RBP12.63□□□□□ -0.39
CLN5-218ENST00000637397 LINC00477Q96M19 166 aa12.63□□□□□ -0.39
CLN5-218ENST00000637397 ZNF747Q9BV97 191 aa12.63□□□□□ -0.39
CLN5-218ENST00000637397 TOMM7Q9P0U1 55 aa12.63□□□□□ -0.39
CLN5-218ENST00000637397 ZNF688P0C7X2 276 aa12.63□□□□□ -0.39
CLN5-218ENST00000637397 FAM120AOSQ5T036 256 aa12.63□□□□□ -0.39
CLN5-218ENST00000637397 TRBV7-1A0A0A6YYK4 115 aa12.63□□□□□ -0.39
CLN5-218ENST00000637397 TRAV12-3A0A0B4J271 114 aa12.63□□□□□ -0.39
CLN5-218ENST00000637397 PATE2Q6UY27 113 aa12.63□□□□□ -0.39
CLN5-218ENST00000637397 C10orf126Q8N4M7 172 aa12.63□□□□□ -0.39
CLN5-218ENST00000637397 C3orf36Q3SXR2 165 aa12.62□□□□□ -0.39
CLN5-218ENST00000637397 FCN3O75636 299 aa12.62□□□□□ -0.39
CLN5-218ENST00000637397 ANAPC13Q9BS18 74 aa12.62□□□□□ -0.39
CLN5-218ENST00000637397 TMEM262E9PQX1 116 aa12.62□□□□□ -0.39
CLN5-218ENST00000637397 CEACAM8P31997 349 aaPredicted RBP12.62□□□□□ -0.39
CLN5-218ENST00000637397 ETDBQ3ZM63 59 aa12.62□□□□□ -0.39
CLN5-218ENST00000637397 ZNF876PQ49A33 203 aa12.62□□□□□ -0.39
CLN5-218ENST00000637397 ZNF491Q8N8L2 437 aa12.61□□□□□ -0.39
CLN5-218ENST00000637397 ADAMTS9Q9P2N4 1935 aa12.61□□□□□ -0.39
CLN5-218ENST00000637397 TRAV26-2A0A0B4J265 109 aa12.61□□□□□ -0.39
CLN5-218ENST00000637397 PRR30Q53SZ7 412 aaPredicted RBP12.61□□□□□ -0.39
CLN5-218ENST00000637397 A0A087WWL8 130 aa12.61□□□□□ -0.39
CLN5-218ENST00000637397 LINC01549A6NIU2 74 aa12.61□□□□□ -0.39
CLN5-218ENST00000637397 DKK2Q9UBU2 259 aa12.61□□□□□ -0.39
CLN5-218ENST00000637397 VCYO14598 125 aa12.61□□□□□ -0.39
CLN5-218ENST00000637397 SAA4P35542 130 aa12.61□□□□□ -0.39
CLN5-218ENST00000637397 FAM167A-AS1Q96KT0 104 aa12.61□□□□□ -0.39
CLN5-218ENST00000637397 YPEL4Q96NS1 127 aa12.61□□□□□ -0.39
CLN5-218ENST00000637397 VGLL1Q99990 258 aa12.61□□□□□ -0.39
CLN5-218ENST00000637397 ANKHD1Q8IWZ3 2542 aaKnown RBP12.61□□□□□ -0.39
CLN5-218ENST00000637397 IGF2BP2-AS1Q96M15 143 aa12.6□□□□□ -0.39
CLN5-218ENST00000637397 LHBP01229 141 aa12.6□□□□□ -0.39
CLN5-218ENST00000637397 ATP6V0E1O15342 81 aa12.6□□□□□ -0.39
CLN5-218ENST00000637397 Q8N8P6 123 aa12.6□□□□□ -0.39
CLN5-218ENST00000637397 MRPL35Q9NZE8 188 aaKnown RBP12.6□□□□□ -0.39
CLN5-218ENST00000637397 G3V318 75 aa12.6□□□□□ -0.39
CLN5-218ENST00000637397 K7EM74 188 aa12.6□□□□□ -0.39
CLN5-218ENST00000637397 COX6B1P14854 86 aa12.6□□□□□ -0.39
CLN5-218ENST00000637397 TMEM95Q3KNT9 176 aa12.6□□□□□ -0.39
CLN5-218ENST00000637397 IGHV3-73A0A0B4J1V6 119 aa12.59□□□□□ -0.39
CLN5-218ENST00000637397 K7EP34 96 aa12.59□□□□□ -0.39
CLN5-218ENST00000637397 EFNA4P52798 201 aa12.59□□□□□ -0.39
CLN5-218ENST00000637397 NPC2P61916 151 aa12.59□□□□□ -0.39
CLN5-218ENST00000637397 DEFB125Q8N687 156 aa12.59□□□□□ -0.39
CLN5-218ENST00000637397 CTSZQ9UBR2 303 aa12.59□□□□□ -0.39
CLN5-218ENST00000637397 DUSP14O95147 198 aaKnown RBP12.59□□□□□ -0.39
CLN5-218ENST00000637397 SPOCK3Q9BQ16 436 aa12.59□□□□□ -0.39
CLN5-218ENST00000637397 H3BUX3 64 aa12.59□□□□□ -0.39
CLN5-218ENST00000637397 C2orf66Q6UXQ4 117 aa12.59□□□□□ -0.39
CLN5-218ENST00000637397 NDUFS7O75251 213 aa12.59□□□□□ -0.39
CLN5-218ENST00000637397 NDUFS8O00217 210 aa12.58□□□□□ -0.39
CLN5-218ENST00000637397 BRWD1-AS2P59051 145 aa12.58□□□□□ -0.39
CLN5-218ENST00000637397 TMEM101Q96IK0 257 aa12.58□□□□□ -0.39
CLN5-218ENST00000637397 TMEM238C9JI98 176 aa12.58□□□□□ -0.4
CLN5-218ENST00000637397 P0C879 139 aa12.58□□□□□ -0.4
CLN5-218ENST00000637397 DTX2Q86UW9 622 aa12.58□□□□□ -0.4
CLN5-218ENST00000637397 RHPN1-AS1Q9BWJ2 59 aa12.58□□□□□ -0.4
CLN5-218ENST00000637397 PLXNB1O43157 2135 aa12.58□□□□□ -0.4
CLN5-218ENST00000637397 C22orf46C9J442 243 aa12.58□□□□□ -0.4
CLN5-218ENST00000637397 PROP1O75360 226 aa12.58□□□□□ -0.4
CLN5-218ENST00000637397 CKS1BP61024 79 aa12.58□□□□□ -0.4
CLN5-218ENST00000637397 A0A1W2PPM0 123 aa12.58□□□□□ -0.4
CLN5-218ENST00000637397 HLA-DMBP28068 263 aa12.58□□□□□ -0.4
CLN5-218ENST00000637397 K7ERJ3 54 aa12.57□□□□□ -0.4
CLN5-218ENST00000637397 PCP2Q8IVA1 136 aa12.57□□□□□ -0.4
CLN5-218ENST00000637397 RNASE8Q8TDE3 154 aaKnown RBP12.57□□□□□ -0.4
CLN5-218ENST00000637397 TMEM131Q92545 1883 aa12.57□□□□□ -0.4
CLN5-218ENST00000637397 IGHV2-70DA0A0C4DH43 119 aa12.57□□□□□ -0.4
CLN5-218ENST00000637397 LTBP2Q14767 1821 aa12.57□□□□□ -0.4
CLN5-218ENST00000637397 GP9P14770 177 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 GAGE2BQ13066 116 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 GAGE2EQ4V326 116 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 GAGE2DQ9UEU5 116 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 LY6DQ14210 128 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 IGFL3Q6UXB1 125 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 BPESC1Q9GZL8 116 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 DNAH12Q6ZR08 3092 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 TRGV11A0A075B6L2 103 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 EGR2P11161 476 aaPredicted RBP12.56□□□□□ -0.4
CLN5-218ENST00000637397 SLC25A16P16260 332 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 GTSF1Q8WW33 167 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 RITA1Q96K30 269 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 DKK4Q9UBT3 224 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 TSSC4Q9Y5U2 329 aaPredicted RBP12.56□□□□□ -0.4
CLN5-218ENST00000637397 E7EUB6 86 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 OVOL3O00110 214 aa12.56□□□□□ -0.4
CLN5-218ENST00000637397 WT1P19544 449 aaPredicted RBP12.56□□□□□ -0.4
CLN5-218ENST00000637397 FAM110DQ8TAY7 271 aaPredicted RBP12.56□□□□□ -0.4
CLN5-218ENST00000637397 TRBV7-9A0A0J9YWB2 115 aa12.55□□□□□ -0.4
CLN5-218ENST00000637397 KAAG1Q9UBP8 84 aa12.55□□□□□ -0.4
CLN5-218ENST00000637397 TRAV8-4A0A0B4J246 113 aa12.55□□□□□ -0.4
CLN5-218ENST00000637397 M0R2P5 195 aa12.55□□□□□ -0.4
CLN5-218ENST00000637397 PLA2G2CQ5R387 149 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms