RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276		E9PLN8	166 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276	INAFM2	P0DMQ5	153 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276	IGHV4-30-4	P0DP06	118 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276	IGHV4-31	P0DP07	118 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276	MLST8	Q9BVC4	326 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276	LTBP4	Q8N2S1	1624 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276		A0A1B0GUS0	222 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276	FGF6	P10767	208 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276	HIST1H2BL	Q99880	126 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276	PARP14	Q460N5	1801 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276		A0A1B0GTI1	187 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276	ANK1	P16157	1881 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276	TSC2	P49815	1807 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276	TRPM7	Q96QT4	1865 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276	COL4A1	P02462	1669 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276	ZC2HC1B	Q5TFG8	222 aa		13.23	□□□□□ -0.29
CACNA1A-238	ENST00000637276	LYPD6B	Q8NI32	183 aa		13.22	□□□□□ -0.29
CACNA1A-238	ENST00000637276	RMI2	Q96E14	147 aa		13.22	□□□□□ -0.29
CACNA1A-238	ENST00000637276	MYLK	Q15746	1914 aa		13.22	□□□□□ -0.29
CACNA1A-238	ENST00000637276	GAGE12H	A6NDE8	117 aa		13.22	□□□□□ -0.29
CACNA1A-238	ENST00000637276		H0YIZ8	118 aa		13.22	□□□□□ -0.29
CACNA1A-238	ENST00000637276	NHSL1	Q5SYE7	1610 aa		13.22	□□□□□ -0.29
CACNA1A-238	ENST00000637276	WNK3	Q9BYP7	1800 aa		13.22	□□□□□ -0.29
CACNA1A-238	ENST00000637276	IGHG2	P01859	326 aa		13.22	□□□□□ -0.29
CACNA1A-238	ENST00000637276	TREML4	Q6UXN2	200 aa		13.22	□□□□□ -0.29
CACNA1A-238	ENST00000637276	ARID2	Q68CP9	1835 aa		13.22	□□□□□ -0.29
CACNA1A-238	ENST00000637276	PLXND1	Q9Y4D7	1925 aa		13.22	□□□□□ -0.29
CACNA1A-238	ENST00000637276	IGHV1OR15-1	A0A075B7D0	117 aa		13.21	□□□□□ -0.29
CACNA1A-238	ENST00000637276	BTC	P35070	178 aa		13.21	□□□□□ -0.29
CACNA1A-238	ENST00000637276	ATP5I	P56385	69 aa	Predicted RBP	13.21	□□□□□ -0.29
CACNA1A-238	ENST00000637276	TRPT1	Q86TN4	253 aa	Known RBP	13.21	□□□□□ -0.29
CACNA1A-238	ENST00000637276	RNF144B	Q7Z419	303 aa		13.21	□□□□□ -0.29
CACNA1A-238	ENST00000637276	COX7B2	Q8TF08	81 aa		13.21	□□□□□ -0.29
CACNA1A-238	ENST00000637276	TAF1L	Q8IZX4	1826 aa		13.21	□□□□□ -0.29
CACNA1A-238	ENST00000637276	IGKV3D-7	A0A0C4DH55	119 aa		13.21	□□□□□ -0.3
CACNA1A-238	ENST00000637276	IGKV2-24	A0A0C4DH68	120 aa		13.21	□□□□□ -0.3
CACNA1A-238	ENST00000637276	C5orf63	A6NC05	138 aa		13.21	□□□□□ -0.3
CACNA1A-238	ENST00000637276		J3QKU1	62 aa		13.21	□□□□□ -0.3
CACNA1A-238	ENST00000637276	MSMB	P08118	114 aa		13.21	□□□□□ -0.3
CACNA1A-238	ENST00000637276	OSTC	Q9NRP0	149 aa		13.21	□□□□□ -0.3
CACNA1A-238	ENST00000637276	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.21	□□□□□ -0.3
CACNA1A-238	ENST00000637276	IGFBP3	P17936	291 aa	Predicted RBP	13.2	□□□□□ -0.3
CACNA1A-238	ENST00000637276	BOD1L2	Q8IYS8	172 aa		13.2	□□□□□ -0.3
CACNA1A-238	ENST00000637276	CFHR4	Q92496	578 aa		13.2	□□□□□ -0.3
CACNA1A-238	ENST00000637276	WNK1	Q9H4A3	2382 aa		13.2	□□□□□ -0.3
CACNA1A-238	ENST00000637276	AMBP	P02760	352 aa		13.2	□□□□□ -0.3
CACNA1A-238	ENST00000637276	CASC2	Q6XLA1	102 aa		13.2	□□□□□ -0.3
CACNA1A-238	ENST00000637276	MED13L	Q71F56	2210 aa		13.2	□□□□□ -0.3
CACNA1A-238	ENST00000637276	PTPRD	P23468	1912 aa		13.2	□□□□□ -0.3
CACNA1A-238	ENST00000637276	IGLV3-9	A0A075B6K5	115 aa		13.2	□□□□□ -0.3
CACNA1A-238	ENST00000637276	DAZ1	Q9NQZ3	744 aa	Known RBP	13.19	□□□□□ -0.3
CACNA1A-238	ENST00000637276	COL11A2	P13942	1736 aa	Predicted RBP	13.19	□□□□□ -0.3
CACNA1A-238	ENST00000637276	C5orf64	Q2M2E5	130 aa		13.19	□□□□□ -0.3
CACNA1A-238	ENST00000637276	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.19	□□□□□ -0.3
CACNA1A-238	ENST00000637276		I3L3M4	83 aa		13.19	□□□□□ -0.3
CACNA1A-238	ENST00000637276	IGLV3-21	P80748	117 aa	Predicted RBP	13.19	□□□□□ -0.3
CACNA1A-238	ENST00000637276	HEPN1	Q6WQI6	88 aa		13.19	□□□□□ -0.3
CACNA1A-238	ENST00000637276	GLRX5	Q86SX6	157 aa		13.19	□□□□□ -0.3
CACNA1A-238	ENST00000637276		H0YJW9	148 aa		13.18	□□□□□ -0.3
CACNA1A-238	ENST00000637276	FOXE3	Q13461	319 aa		13.18	□□□□□ -0.3
CACNA1A-238	ENST00000637276	RPRML	Q8N4K4	120 aa		13.18	□□□□□ -0.3
CACNA1A-238	ENST00000637276	UBR3	Q6ZT12	1888 aa		13.18	□□□□□ -0.3
CACNA1A-238	ENST00000637276	ZFP36	P26651	326 aa	Known RBP	13.18	□□□□□ -0.3
CACNA1A-238	ENST00000637276	C8orf86	Q6ZUL3	223 aa		13.18	□□□□□ -0.3
CACNA1A-238	ENST00000637276	IGKV1-12	A0A0C4DH73	117 aa		13.18	□□□□□ -0.3
CACNA1A-238	ENST00000637276		M0R2N4	97 aa		13.18	□□□□□ -0.3
CACNA1A-238	ENST00000637276	LY6G6F	Q5SQ64	297 aa		13.18	□□□□□ -0.3
CACNA1A-238	ENST00000637276	TRBV20-1	A0A075B6N2	111 aa		13.18	□□□□□ -0.3
CACNA1A-238	ENST00000637276	SIPA1L3	O60292	1781 aa	Predicted RBP	13.17	□□□□□ -0.3
CACNA1A-238	ENST00000637276	DSCAML1	Q8TD84	2053 aa		13.17	□□□□□ -0.3
CACNA1A-238	ENST00000637276	OVOL2	Q9BRP0	275 aa		13.17	□□□□□ -0.3
CACNA1A-238	ENST00000637276	NCKAP5	O14513	1909 aa		13.17	□□□□□ -0.3
CACNA1A-238	ENST00000637276		E7EQL1	145 aa		13.17	□□□□□ -0.3
CACNA1A-238	ENST00000637276	SLURP1	P55000	103 aa		13.17	□□□□□ -0.3
CACNA1A-238	ENST00000637276	HIST3H2BB	Q8N257	126 aa		13.17	□□□□□ -0.3
CACNA1A-238	ENST00000637276	FAM223B	A6NKX1	122 aa		13.17	□□□□□ -0.3
CACNA1A-238	ENST00000637276	FAM223A	Q8IWN6	122 aa		13.17	□□□□□ -0.3
CACNA1A-238	ENST00000637276	CARD19	Q96LW7	228 aa		13.17	□□□□□ -0.3
CACNA1A-238	ENST00000637276	NTF4	P34130	210 aa		13.17	□□□□□ -0.3
CACNA1A-238	ENST00000637276	DAND5	Q8N907	189 aa		13.17	□□□□□ -0.3
CACNA1A-238	ENST00000637276	PIFO	Q8TCI5	191 aa		13.17	□□□□□ -0.3
CACNA1A-238	ENST00000637276	TRAV9-1	A0A075B6T8	112 aa		13.16	□□□□□ -0.3
CACNA1A-238	ENST00000637276	IGKV1-16	P04430	117 aa		13.16	□□□□□ -0.3
CACNA1A-238	ENST00000637276	GFI1	Q99684	422 aa		13.16	□□□□□ -0.3
CACNA1A-238	ENST00000637276	SS18L2	Q9UHA2	77 aa		13.16	□□□□□ -0.3
CACNA1A-238	ENST00000637276	LINC01549	A6NIU2	74 aa		13.16	□□□□□ -0.3
CACNA1A-238	ENST00000637276	FAM104B	Q5XKR9	115 aa		13.16	□□□□□ -0.3
CACNA1A-238	ENST00000637276	GAFA1	Q96PS6	74 aa		13.16	□□□□□ -0.3
CACNA1A-238	ENST00000637276		M0R1W7	72 aa		13.16	□□□□□ -0.3
CACNA1A-238	ENST00000637276	PPBP	P02775	128 aa		13.16	□□□□□ -0.3
CACNA1A-238	ENST00000637276	CAMK2N2	Q96S95	79 aa		13.16	□□□□□ -0.3
CACNA1A-238	ENST00000637276	IGHV4-30-2	A0A087WSY4	118 aa		13.16	□□□□□ -0.3
CACNA1A-238	ENST00000637276	GNRH2	O43555	120 aa		13.16	□□□□□ -0.3
CACNA1A-238	ENST00000637276	NDUFS6	O75380	124 aa	Known RBP	13.16	□□□□□ -0.3
CACNA1A-238	ENST00000637276	ELANE	P08246	267 aa		13.15	□□□□□ -0.3
CACNA1A-238	ENST00000637276		A0A1B0GWJ7	208 aa		13.15	□□□□□ -0.3
CACNA1A-238	ENST00000637276	PRR4	Q16378	134 aa		13.15	□□□□□ -0.3
CACNA1A-238	ENST00000637276	AGMAT	Q9BSE5	352 aa		13.15	□□□□□ -0.3
CACNA1A-238	ENST00000637276	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.15	□□□□□ -0.3
CACNA1A-238	ENST00000637276	HLA-DMB	P28068	263 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms