RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 PRB4P10163 310 aaPredicted RBP11.31□□□□□ -0.6
CLN6-215ENST00000636674 ZNF80P51504 273 aaPredicted RBP11.31□□□□□ -0.6
CLN6-215ENST00000636674 KLRB1Q12918 225 aa11.31□□□□□ -0.6
CLN6-215ENST00000636674 KLK9Q2XQG4 91 aa11.31□□□□□ -0.6
CLN6-215ENST00000636674 AMMECR1LQ6DCA0 310 aa11.31□□□□□ -0.6
CLN6-215ENST00000636674 ZNF575Q86XF7 245 aa11.31□□□□□ -0.6
CLN6-215ENST00000636674 PIFOQ8TCI5 191 aa11.31□□□□□ -0.6
CLN6-215ENST00000636674 KLK9Q9UKQ9 250 aa11.31□□□□□ -0.6
CLN6-215ENST00000636674 CKS2P33552 79 aa11.3□□□□□ -0.6
CLN6-215ENST00000636674 CACNG7P62955 275 aa11.3□□□□□ -0.6
CLN6-215ENST00000636674 FOXE3Q13461 319 aa11.3□□□□□ -0.6
CLN6-215ENST00000636674 MINOS1Q5TGZ0 78 aa11.3□□□□□ -0.6
CLN6-215ENST00000636674 IFI27L1Q96BM0 104 aa11.3□□□□□ -0.6
CLN6-215ENST00000636674 MINOS1-NBL1R4GNA1 71 aa11.3□□□□□ -0.6
CLN6-215ENST00000636674 C7orf71A4D174 169 aa11.3□□□□□ -0.6
CLN6-215ENST00000636674 SMAD7O15105 426 aaKnown RBP11.3□□□□□ -0.6
CLN6-215ENST00000636674 PSMG4Q5JS54 123 aa11.3□□□□□ -0.6
CLN6-215ENST00000636674 ERASQ7Z444 233 aa11.3□□□□□ -0.6
CLN6-215ENST00000636674 VMO1Q7Z5L0 202 aa11.3□□□□□ -0.6
CLN6-215ENST00000636674 VGLL1Q99990 258 aa11.3□□□□□ -0.6
CLN6-215ENST00000636674 CST9LQ9H4G1 147 aa11.3□□□□□ -0.6
CLN6-215ENST00000636674 TRAV8-6A0A0B4J262 113 aa11.29□□□□□ -0.6
CLN6-215ENST00000636674 FAM90A27PA6NNH2 459 aa11.29□□□□□ -0.6
CLN6-215ENST00000636674 RAB9AP51151 201 aa11.29□□□□□ -0.6
CLN6-215ENST00000636674 HSD52Q0P140 79 aa11.29□□□□□ -0.6
CLN6-215ENST00000636674 TWIST1Q15672 202 aa11.29□□□□□ -0.6
CLN6-215ENST00000636674 Q8TAT8 98 aa11.29□□□□□ -0.6
CLN6-215ENST00000636674 RNF185Q96GF1 192 aa11.29□□□□□ -0.6
CLN6-215ENST00000636674 ANKHD1Q8IWZ3 2542 aaKnown RBP11.28□□□□□ -0.6
CLN6-215ENST00000636674 RBAKDNA6NC62 111 aa11.28□□□□□ -0.6
CLN6-215ENST00000636674 GRNP28799 593 aaKnown RBP11.28□□□□□ -0.6
CLN6-215ENST00000636674 LINC01559Q495D7 138 aa11.28□□□□□ -0.6
CLN6-215ENST00000636674 C11orf71Q6IPW1 123 aa11.28□□□□□ -0.6
CLN6-215ENST00000636674 DYNAPQ8N1N2 210 aa11.28□□□□□ -0.6
CLN6-215ENST00000636674 IGHV7-81A0A0B4J1V7 117 aa11.28□□□□□ -0.6
CLN6-215ENST00000636674 A6NDN8 102 aa11.28□□□□□ -0.6
CLN6-215ENST00000636674 H3BRM9 83 aa11.28□□□□□ -0.6
CLN6-215ENST00000636674 NDUFS7O75251 213 aa11.28□□□□□ -0.6
CLN6-215ENST00000636674 OR4X2Q8NGF9 303 aa11.28□□□□□ -0.6
CLN6-215ENST00000636674 MAP1LC3AQ9H492 121 aa11.28□□□□□ -0.6
CLN6-215ENST00000636674 NCBP2LA6PVI3 153 aaKnown RBP11.27□□□□□ -0.61
CLN6-215ENST00000636674 FABP5P3A8MUU1 101 aa11.27□□□□□ -0.61
CLN6-215ENST00000636674 LY6HO94772 140 aa11.27□□□□□ -0.61
CLN6-215ENST00000636674 PLA2G2AP14555 144 aa11.27□□□□□ -0.61
CLN6-215ENST00000636674 C21orf62-AS1Q17RA5 79 aa11.27□□□□□ -0.61
CLN6-215ENST00000636674 OCIAD2Q56VL3 154 aa11.27□□□□□ -0.61
CLN6-215ENST00000636674 ARHGAP32A7KAX9 2087 aa11.27□□□□□ -0.61
CLN6-215ENST00000636674 A1L4Q6 167 aa11.26□□□□□ -0.61
CLN6-215ENST00000636674 SMKR1H3BMG3 65 aa11.26□□□□□ -0.61
CLN6-215ENST00000636674 SNAI2O43623 268 aa11.26□□□□□ -0.61
CLN6-215ENST00000636674 IGHV3-23P01764 117 aa11.26□□□□□ -0.61
CLN6-215ENST00000636674 ADAMTSL5Q6ZMM2 481 aa11.26□□□□□ -0.61
CLN6-215ENST00000636674 FAM110DQ8TAY7 271 aaPredicted RBP11.26□□□□□ -0.61
CLN6-215ENST00000636674 ZFAND3Q9H8U3 227 aa11.26□□□□□ -0.61
CLN6-215ENST00000636674 HELZ2Q9BYK8 2649 aaKnown RBP11.26□□□□□ -0.61
CLN6-215ENST00000636674 C9orf118A6NHY6 69 aa11.26□□□□□ -0.61
CLN6-215ENST00000636674 TMEM11P17152 192 aa11.26□□□□□ -0.61
CLN6-215ENST00000636674 HLA-DMBP28068 263 aa11.26□□□□□ -0.61
CLN6-215ENST00000636674 UFSP1Q6NVU6 142 aa11.26□□□□□ -0.61
CLN6-215ENST00000636674 ZNF502Q8TBZ5 544 aa11.26□□□□□ -0.61
CLN6-215ENST00000636674 NXT2Q9NPJ8 142 aaKnown RBP11.26□□□□□ -0.61
CLN6-215ENST00000636674 Q8N9W7 124 aa11.25□□□□□ -0.61
CLN6-215ENST00000636674 SLC50A1Q9BRV3 221 aa11.25□□□□□ -0.61
CLN6-215ENST00000636674 ZMAT4Q9H898 229 aa11.25□□□□□ -0.61
CLN6-215ENST00000636674 NBASA2RRP1 2371 aa11.25□□□□□ -0.61
CLN6-215ENST00000636674 A0A1W2PRD5 423 aa11.25□□□□□ -0.61
CLN6-215ENST00000636674 A0A1W2PRF3 423 aa11.25□□□□□ -0.61
CLN6-215ENST00000636674 A0A1W2PRM7 423 aa11.25□□□□□ -0.61
CLN6-215ENST00000636674 BUB3O43684 328 aa11.25□□□□□ -0.61
CLN6-215ENST00000636674 FCER1GP30273 86 aa11.25□□□□□ -0.61
CLN6-215ENST00000636674 PRSS57Q6UWY2 283 aa11.25□□□□□ -0.61
CLN6-215ENST00000636674 GAGE12BA1L429 117 aa11.24□□□□□ -0.61
CLN6-215ENST00000636674 ORM1P02763 201 aa11.24□□□□□ -0.61
CLN6-215ENST00000636674 FXYD7P58549 80 aa11.24□□□□□ -0.61
CLN6-215ENST00000636674 IGFL4Q6B9Z1 124 aa11.23□□□□□ -0.61
CLN6-215ENST00000636674 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.23□□□□□ -0.61
CLN6-215ENST00000636674 MRPL53Q96EL3 112 aaKnown RBP11.23□□□□□ -0.61
CLN6-215ENST00000636674 SIRPDQ9H106 197 aa11.23□□□□□ -0.61
CLN6-215ENST00000636674 MSRB1Q9NZV6 116 aa11.23□□□□□ -0.61
CLN6-215ENST00000636674 GCN1Q92616 2671 aaKnown RBP11.23□□□□□ -0.61
CLN6-215ENST00000636674 J3QKU1 62 aa11.23□□□□□ -0.61
CLN6-215ENST00000636674 TNFRSF6BO95407 300 aa11.23□□□□□ -0.61
CLN6-215ENST00000636674 ODF1Q14990 250 aa11.23□□□□□ -0.61
CLN6-215ENST00000636674 GTF2H5Q6ZYL4 71 aa11.23□□□□□ -0.61
CLN6-215ENST00000636674 GAGE10A6NGK3 116 aa11.22□□□□□ -0.61
CLN6-215ENST00000636674 KIR3DS1Q14943 382 aa11.22□□□□□ -0.61
CLN6-215ENST00000636674 C15orf32Q32M92 178 aa11.22□□□□□ -0.61
CLN6-215ENST00000636674 HIGD1BQ9P298 99 aa11.22□□□□□ -0.61
CLN6-215ENST00000636674 DKK2Q9UBU2 259 aa11.22□□□□□ -0.61
CLN6-215ENST00000636674 PRSS47A8MTI9 375 aa11.21□□□□□ -0.61
CLN6-215ENST00000636674 PRAC2D3DTV9 90 aa11.21□□□□□ -0.61
CLN6-215ENST00000636674 CCL21O00585 134 aa11.21□□□□□ -0.61
CLN6-215ENST00000636674 HLA-DRB4P13762 266 aa11.21□□□□□ -0.61
CLN6-215ENST00000636674 DTX2Q86UW9 622 aa11.21□□□□□ -0.61
CLN6-215ENST00000636674 PCP2Q8IVA1 136 aa11.21□□□□□ -0.61
CLN6-215ENST00000636674 AP1S3Q96PC3 154 aa11.21□□□□□ -0.61
CLN6-215ENST00000636674 JMJD8Q96S16 334 aa11.21□□□□□ -0.61
CLN6-215ENST00000636674 HLA-DRB4X5D2U9 266 aa11.21□□□□□ -0.61
CLN6-215ENST00000636674 IGLV2-18A0A075B6J9 118 aa11.21□□□□□ -0.62
CLN6-215ENST00000636674 CLPSL1A2RUU4 121 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms