RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 SSX7Q7RTT5 188 aa11.67□□□□□ -0.54
CACNA1A-229ENST00000636670 C1orf158Q8N1D5 194 aa11.67□□□□□ -0.54
CACNA1A-229ENST00000636670 SUN5Q8TC36 379 aa11.67□□□□□ -0.54
CACNA1A-229ENST00000636670 HYLS1Q96M11 299 aa11.67□□□□□ -0.54
CACNA1A-229ENST00000636670 C20orf144Q9BQM9 153 aa11.67□□□□□ -0.54
CACNA1A-229ENST00000636670 OTORQ9NRC9 128 aa11.67□□□□□ -0.54
CACNA1A-229ENST00000636670 TMEM167BQ9NRX6 74 aa11.67□□□□□ -0.54
CACNA1A-229ENST00000636670 IGHV3OR16-12A0A075B7B8 117 aa11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 RBAKDNA6NC62 111 aa11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 NUPR2A6NF83 97 aa11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 SLC25A5P05141 298 aaKnown RBP11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 RBMY1A1P0DJD3 496 aaKnown RBP11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 RBMY1CP0DJD4 496 aa11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 TPT1P13693 172 aaKnown RBP11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 RBMY1FQ15415 496 aaKnown RBP11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 ZNF726P1Q15940 193 aa11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 C9orf47Q6ZRZ4 202 aa11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 TMEM256Q8N2U0 113 aa11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 ARL6IP6Q8N6S5 226 aa11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 STOML3Q8TAV4 291 aa11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 RXFP4Q8TDU9 374 aa11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 LINC00477Q96M19 166 aa11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 TMEM208Q9BTX3 173 aa11.66□□□□□ -0.54
CACNA1A-229ENST00000636670 TRAV12-2A0A075B6T6 113 aa11.65□□□□□ -0.54
CACNA1A-229ENST00000636670 IGKV2-40A0A087WW87 121 aaPredicted RBP11.65□□□□□ -0.54
CACNA1A-229ENST00000636670 TMEM189A5PLL7 270 aa11.65□□□□□ -0.54
CACNA1A-229ENST00000636670 IGKV2D-40P01614 121 aaPredicted RBP11.65□□□□□ -0.54
CACNA1A-229ENST00000636670 HBE1P02100 147 aa11.65□□□□□ -0.54
CACNA1A-229ENST00000636670 CT45A10P0DMU9 189 aa11.65□□□□□ -0.54
CACNA1A-229ENST00000636670 TMEM78Q5T7P6 136 aa11.65□□□□□ -0.54
CACNA1A-229ENST00000636670 CXorf65A6NEN9 183 aa11.64□□□□□ -0.55
CACNA1A-229ENST00000636670 UMAD1C9J7I0 102 aa11.64□□□□□ -0.55
CACNA1A-229ENST00000636670 DEFB4AO15263 64 aa11.64□□□□□ -0.55
CACNA1A-229ENST00000636670 CMTM2Q8TAZ6 248 aa11.64□□□□□ -0.55
CACNA1A-229ENST00000636670 FAM19A4Q96LR4 140 aa11.64□□□□□ -0.55
CACNA1A-229ENST00000636670 TRBV7-9A0A0J9YWB2 115 aa11.63□□□□□ -0.55
CACNA1A-229ENST00000636670 MAP1LC3B2A6NCE7 125 aa11.63□□□□□ -0.55
CACNA1A-229ENST00000636670 DIRC3C9JPN6 131 aa11.63□□□□□ -0.55
CACNA1A-229ENST00000636670 CRISP2P16562 243 aa11.63□□□□□ -0.55
CACNA1A-229ENST00000636670 ERCC8Q13216 396 aa11.63□□□□□ -0.55
CACNA1A-229ENST00000636670 RRN3P1Q2M238 152 aa11.63□□□□□ -0.55
CACNA1A-229ENST00000636670 GFI1BQ5VTD9 330 aa11.63□□□□□ -0.55
CACNA1A-229ENST00000636670 LGALS9CQ6DKI2 356 aa11.63□□□□□ -0.55
CACNA1A-229ENST00000636670 C11orf45Q8TAV5 145 aa11.63□□□□□ -0.55
CACNA1A-229ENST00000636670 KRTAP4-5Q9BYR2 181 aa11.63□□□□□ -0.55
CACNA1A-229ENST00000636670 MAP1LC3BQ9GZQ8 125 aa11.63□□□□□ -0.55
CACNA1A-229ENST00000636670 AGPAT4-IT1Q9H0P7 198 aa11.63□□□□□ -0.55
CACNA1A-229ENST00000636670 VPS13DQ5THJ4 4388 aa11.63□□□□□ -0.55
CACNA1A-229ENST00000636670 TEX48A0A1B0GUV7 120 aa11.62□□□□□ -0.55
CACNA1A-229ENST00000636670 LOC102723971A0A1B0GUV8 181 aa11.62□□□□□ -0.55
CACNA1A-229ENST00000636670 SERTM2A0A1B0GWG4 89 aa11.62□□□□□ -0.55
CACNA1A-229ENST00000636670 PGPA6NDG6 321 aa11.62□□□□□ -0.55
CACNA1A-229ENST00000636670 KLLNB2CW77 178 aa11.62□□□□□ -0.55
CACNA1A-229ENST00000636670 NMBP08949 121 aa11.62□□□□□ -0.55
CACNA1A-229ENST00000636670 LGALSLQ3ZCW2 172 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-229ENST00000636670 DPPA3Q6W0C5 159 aa11.62□□□□□ -0.55
CACNA1A-229ENST00000636670 IQCF2Q8IXL9 164 aa11.62□□□□□ -0.55
CACNA1A-229ENST00000636670 C5orf17Q8NAS9 161 aa11.62□□□□□ -0.55
CACNA1A-229ENST00000636670 TMED6Q8WW62 240 aa11.62□□□□□ -0.55
CACNA1A-229ENST00000636670 VGLL1Q99990 258 aa11.62□□□□□ -0.55
CACNA1A-229ENST00000636670 ZNF492Q9P255 531 aa11.62□□□□□ -0.55
CACNA1A-229ENST00000636670 A0A1B0GVG6 124 aa11.61□□□□□ -0.55
CACNA1A-229ENST00000636670 H7BYZ3 331 aa11.61□□□□□ -0.55
CACNA1A-229ENST00000636670 ZNF138P52744 262 aa11.61□□□□□ -0.55
CACNA1A-229ENST00000636670 PMS2P11Q13670 270 aa11.61□□□□□ -0.55
CACNA1A-229ENST00000636670 ZFP69Q49AA0 526 aa11.61□□□□□ -0.55
CACNA1A-229ENST00000636670 CEMP1Q6PRD7 247 aaPredicted RBP11.61□□□□□ -0.55
CACNA1A-229ENST00000636670 KLK5Q9Y337 293 aaPredicted RBP11.61□□□□□ -0.55
CACNA1A-229ENST00000636670 LENEPQ9Y5L5 61 aa11.61□□□□□ -0.55
CACNA1A-229ENST00000636670 A0A1W2PRE2 83 aa11.6□□□□□ -0.55
CACNA1A-229ENST00000636670 C7orf71A4D174 169 aa11.6□□□□□ -0.55
CACNA1A-229ENST00000636670 GGTLC3B5MD39 225 aa11.6□□□□□ -0.55
CACNA1A-229ENST00000636670 TAS2R60P59551 318 aa11.6□□□□□ -0.55
CACNA1A-229ENST00000636670 CD300CQ08708 224 aa11.6□□□□□ -0.55
CACNA1A-229ENST00000636670 KIR3DS1Q14943 382 aa11.6□□□□□ -0.55
CACNA1A-229ENST00000636670 EIF5AL1Q6IS14 154 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-229ENST00000636670 C9orf62Q8N4C0 152 aa11.6□□□□□ -0.55
CACNA1A-229ENST00000636670 Q8TAT8 98 aa11.6□□□□□ -0.55
CACNA1A-229ENST00000636670 NIPSNAP3BQ9BS92 247 aa11.6□□□□□ -0.55
CACNA1A-229ENST00000636670 RPH3ALQ9UNE2 315 aa11.6□□□□□ -0.55
CACNA1A-229ENST00000636670 CELA1Q9UNI1 258 aa11.6□□□□□ -0.55
CACNA1A-229ENST00000636670 FGF8P55075 233 aaPredicted RBP11.59□□□□□ -0.55
CACNA1A-229ENST00000636670 NANOS2P60321 138 aaKnown RBP11.59□□□□□ -0.55
CACNA1A-229ENST00000636670 GOLT1AQ6ZVE7 132 aa11.59□□□□□ -0.55
CACNA1A-229ENST00000636670 SLC51BQ86UW2 128 aa11.59□□□□□ -0.55
CACNA1A-229ENST00000636670 ZFAND2AQ8N6M9 145 aa11.59□□□□□ -0.55
CACNA1A-229ENST00000636670 FAM213BQ8TBF2 198 aa11.59□□□□□ -0.55
CACNA1A-229ENST00000636670 LINC01587Q99440 93 aa11.59□□□□□ -0.55
CACNA1A-229ENST00000636670 ARL2-SNX15V9GYD0 113 aa11.59□□□□□ -0.55
CACNA1A-229ENST00000636670 J3KRW8 73 aa11.58□□□□□ -0.56
CACNA1A-229ENST00000636670 FHITP49789 147 aa11.58□□□□□ -0.56
CACNA1A-229ENST00000636670 GNG5P63218 68 aa11.58□□□□□ -0.56
CACNA1A-229ENST00000636670 TMEM263Q8WUH6 116 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-229ENST00000636670 C16orf74Q96GX8 76 aa11.58□□□□□ -0.56
CACNA1A-229ENST00000636670 PYGO2Q9BRQ0 406 aa11.58□□□□□ -0.56
CACNA1A-229ENST00000636670 NKX6-2Q9C056 277 aaPredicted RBP11.58□□□□□ -0.56
CACNA1A-229ENST00000636670 PLA2G2EQ9NZK7 142 aa11.58□□□□□ -0.56
CACNA1A-229ENST00000636670 YTHDF2Q9Y5A9 579 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-229ENST00000636670 TRAV12-3A0A0B4J271 114 aa11.57□□□□□ -0.56
CACNA1A-229ENST00000636670 ZNF705GA8MUZ8 300 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms