RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 SMIM12Q96EX1 92 aa7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 C16orf92Q96LL3 132 aa7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 C20orf173Q96LM9 149 aa7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 C12orf57Q99622 126 aa7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 OSTCQ9NRP0 149 aa7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 C2orf70A6NJV1 201 aa7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 K7EQM0 130 aa7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 PROK1P58294 105 aa7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 IBA57Q5T440 356 aaKnown RBP7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 ADAMTSL5Q6ZMM2 481 aa7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 TMEM183AQ8IXX5 376 aa7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 OR1N2Q8NGR9 330 aa7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 Q8TAT8 98 aa7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 VGLL1Q99990 258 aa7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 RNF114Q9Y508 228 aa7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 FLNBO75369 2602 aaKnown RBP7.56□□□□□ -1.2
CACNA1A-216ENST00000635742 RAB5AP20339 215 aa7.55□□□□□ -1.2
CACNA1A-216ENST00000635742 FAM3BP58499 235 aaPredicted RBP7.55□□□□□ -1.2
CACNA1A-216ENST00000635742 RPL11P62913 178 aaKnown RBP7.55□□□□□ -1.2
CACNA1A-216ENST00000635742 MRPL53Q96EL3 112 aaKnown RBP7.55□□□□□ -1.2
CACNA1A-216ENST00000635742 RAX2Q96IS3 184 aa7.55□□□□□ -1.2
CACNA1A-216ENST00000635742 NRN1Q9NPD7 142 aa7.55□□□□□ -1.2
CACNA1A-216ENST00000635742 CLEC5AQ9NY25 188 aa7.55□□□□□ -1.2
CACNA1A-216ENST00000635742 A0A1W2PPQ1 181 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 CBLN1P23435 193 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 ERCC8Q13216 396 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 FAM231DQ6ZW35 169 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 ZC2HC1AQ96GY0 325 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 C8orf49Q96NF6 230 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 IL36BQ9NZH7 164 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 BAHCC1Q9P281 2608 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 TRBV24-1A0A075B6N3 115 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 CA1P00915 261 aaPredicted RBP7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 FOLR2P14207 255 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 S100PP25815 95 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 FHL3Q13643 280 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 GBGT1Q8N5D6 347 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 NUDT10Q8NFP7 164 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 DLX4Q92988 240 aaPredicted RBP7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 NUDT11Q96G61 164 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 FAM210BQ96KR6 192 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 PYGO2Q9BRQ0 406 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 ZNF492Q9P255 531 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 MLXQ9UH92 298 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 ZFP30Q9Y2G7 519 aa7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 TSSC4Q9Y5U2 329 aaPredicted RBP7.54□□□□□ -1.2
CACNA1A-216ENST00000635742 C19orf71A6NCJ1 209 aa7.53□□□□□ -1.2
CACNA1A-216ENST00000635742 ZNF705GA8MUZ8 300 aaPredicted RBP7.53□□□□□ -1.2
CACNA1A-216ENST00000635742 DEFB1P60022 68 aa7.53□□□□□ -1.2
CACNA1A-216ENST00000635742 KRTAP10-3P60369 221 aa7.53□□□□□ -1.2
CACNA1A-216ENST00000635742 KCNIP4Q6PIL6 250 aa7.53□□□□□ -1.2
CACNA1A-216ENST00000635742 OR9G4Q8NGQ1 327 aa7.53□□□□□ -1.2
CACNA1A-216ENST00000635742 DCANP1Q8TF63 244 aa7.53□□□□□ -1.2
CACNA1A-216ENST00000635742 IMMP2LQ96T52 175 aa7.53□□□□□ -1.2
CACNA1A-216ENST00000635742 F8P00451 2351 aa7.53□□□□□ -1.2
CACNA1A-216ENST00000635742 RBAKDNA6NC62 111 aa7.52□□□□□ -1.2
CACNA1A-216ENST00000635742 ADARB2-AS1A8MUL3 147 aa7.52□□□□□ -1.2
CACNA1A-216ENST00000635742 RPS10P46783 165 aaKnown RBP7.52□□□□□ -1.2
CACNA1A-216ENST00000635742 TCL1AP56279 114 aa7.52□□□□□ -1.2
CACNA1A-216ENST00000635742 WFDC3Q8IUB2 231 aa7.52□□□□□ -1.2
CACNA1A-216ENST00000635742 ZNF738Q8NE65 137 aa7.52□□□□□ -1.2
CACNA1A-216ENST00000635742 PRR25Q96S07 402 aa7.52□□□□□ -1.2
CACNA1A-216ENST00000635742 MS4A6AQ9H2W1 248 aa7.52□□□□□ -1.2
CACNA1A-216ENST00000635742 NF1P21359 2839 aa7.52□□□□□ -1.2
CACNA1A-216ENST00000635742 FBLL1A6NHQ2 334 aaKnown RBP7.52□□□□□ -1.21
CACNA1A-216ENST00000635742 CCL24O00175 119 aa7.52□□□□□ -1.21
CACNA1A-216ENST00000635742 CSN3P07498 182 aa7.52□□□□□ -1.21
CACNA1A-216ENST00000635742 ZNF705DP0CH99 300 aaPredicted RBP7.52□□□□□ -1.21
CACNA1A-216ENST00000635742 ZNF705BP0CI00 300 aaPredicted RBP7.52□□□□□ -1.21
CACNA1A-216ENST00000635742 TFPI2P48307 235 aa7.52□□□□□ -1.21
CACNA1A-216ENST00000635742 CRIP1P50238 77 aa7.52□□□□□ -1.21
CACNA1A-216ENST00000635742 FOXL1Q12952 345 aa7.52□□□□□ -1.21
CACNA1A-216ENST00000635742 AGPAT4-IT1Q9H0P7 198 aa7.52□□□□□ -1.21
CACNA1A-216ENST00000635742 BIN3Q9NQY0 253 aa7.52□□□□□ -1.21
CACNA1A-216ENST00000635742 PEMTQ9UBM1 199 aa7.52□□□□□ -1.21
CACNA1A-216ENST00000635742 SETXQ7Z333 2677 aaKnown RBP7.51□□□□□ -1.21
CACNA1A-216ENST00000635742 M0QZ24 198 aa7.51□□□□□ -1.21
CACNA1A-216ENST00000635742 PF4P02776 101 aa7.51□□□□□ -1.21
CACNA1A-216ENST00000635742 ZFP82Q8N141 532 aa7.51□□□□□ -1.21
CACNA1A-216ENST00000635742 RPP21Q9H633 154 aaKnown RBP7.51□□□□□ -1.21
CACNA1A-216ENST00000635742 NPIPB6E9PJ23 425 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 F6UB75 175 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 K7EQG2 157 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 P01737 135 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 OXLD1Q5BKU9 147 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 C9orf47Q6ZRZ4 202 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 COX8CQ7Z4L0 72 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 TPPP3Q9BW30 176 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 SMIM27A0A1W2PRY6 76 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 SH2D1AO60880 128 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 TYMSP04818 313 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 CT45A10P0DMU9 189 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 ZNF80P51504 273 aaPredicted RBP7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 RPL19P84098 196 aaKnown RBP7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 NSUN5P1Q3KNT7 163 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 TMEM78Q5T7P6 136 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 DAZAP1Q96EP5 407 aaKnown RBP7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 NDFIP1Q9BT67 221 aa7.5□□□□□ -1.21
CACNA1A-216ENST00000635742 VCX2Q9H322 139 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms