RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 AMBPP02760 352 aa7.04□□□□□ -1.28
LINC00339-210ENST00000635675 STAG3L2P0CL84 134 aa7.04□□□□□ -1.28
LINC00339-210ENST00000635675 STAG3L3P0CL85 134 aa7.04□□□□□ -1.28
LINC00339-210ENST00000635675 MIFP14174 115 aa7.04□□□□□ -1.28
LINC00339-210ENST00000635675 RANP62826 216 aaKnown RBP7.04□□□□□ -1.28
LINC00339-210ENST00000635675 SPINK13Q1W4C9 94 aa7.04□□□□□ -1.28
LINC00339-210ENST00000635675 C1orf158Q8N1D5 194 aa7.04□□□□□ -1.28
LINC00339-210ENST00000635675 Q8NAQ8 132 aa7.04□□□□□ -1.28
LINC00339-210ENST00000635675 OR10J6PQ8NGY7 276 aa7.04□□□□□ -1.28
LINC00339-210ENST00000635675 SUN5Q8TC36 379 aa7.04□□□□□ -1.28
LINC00339-210ENST00000635675 MBD3L1Q8WWY6 194 aa7.04□□□□□ -1.28
LINC00339-210ENST00000635675 IGF2BP2-AS1Q96M15 143 aa7.04□□□□□ -1.28
LINC00339-210ENST00000635675 NEU1Q99519 415 aa7.04□□□□□ -1.28
LINC00339-210ENST00000635675 EIF5A2Q9GZV4 153 aaKnown RBP7.04□□□□□ -1.28
LINC00339-210ENST00000635675 C11orf68Q9H3H3 251 aaKnown RBP7.04□□□□□ -1.28
LINC00339-210ENST00000635675 IGHV4-28A0A0C4DH34 117 aa7.03□□□□□ -1.28
LINC00339-210ENST00000635675 DEFB4AO15263 64 aa7.03□□□□□ -1.28
LINC00339-210ENST00000635675 RBMY1A1P0DJD3 496 aaKnown RBP7.03□□□□□ -1.28
LINC00339-210ENST00000635675 RBMY1CP0DJD4 496 aa7.03□□□□□ -1.28
LINC00339-210ENST00000635675 CT45A10P0DMU9 189 aa7.03□□□□□ -1.28
LINC00339-210ENST00000635675 CEBPGP53567 150 aa7.03□□□□□ -1.28
LINC00339-210ENST00000635675 RBMY1FQ15415 496 aaKnown RBP7.03□□□□□ -1.28
LINC00339-210ENST00000635675 IL17DQ8TAD2 202 aa7.03□□□□□ -1.28
LINC00339-210ENST00000635675 RXFP4Q8TDU9 374 aa7.03□□□□□ -1.28
LINC00339-210ENST00000635675 Q9H3A6 140 aa7.03□□□□□ -1.28
LINC00339-210ENST00000635675 LOC102723971A0A1B0GUV8 181 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 SMIM9A6NGZ8 99 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 CXorf1O96002 111 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 IFNA1P01562 189 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 GCHFRP30047 84 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 CDKN1BP46527 198 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 ERCC8Q13216 396 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 CASC10Q5T4H9 136 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 C9orf47Q6ZRZ4 202 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 LINC00477Q96M19 166 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 FAM210AQ96ND0 272 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 ODF3Q96PU9 254 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 AGPAT4-IT1Q9H0P7 198 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 PPP1R14DQ9NXH3 145 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 GOLT1BQ9Y3E0 138 aa7.02□□□□□ -1.29
LINC00339-210ENST00000635675 TRAV12-2A0A075B6T6 113 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 IGHV3OR16-12A0A075B7B8 117 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 RBFOX3A6NFN3 312 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 PAGE4O60829 102 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 INSP01308 110 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 TSPOP30536 169 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 PPT1P50897 306 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 KIR3DS1Q14943 382 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 CST9LP1Q5W188 147 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 LYPD6BQ8NI32 183 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 FAM19A4Q96LR4 140 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 OTORQ9NRC9 128 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 MED9Q9NWA0 146 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 DNAH7Q8WXX0 4024 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 IGKV2-40A0A087WW87 121 aaPredicted RBP7.01□□□□□ -1.29
LINC00339-210ENST00000635675 RAB19A4D1S5 217 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 RBAKDNA6NC62 111 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 PGPA6NDG6 321 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 C9JQL5 133 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 IGKV2D-40P01614 121 aaPredicted RBP7.01□□□□□ -1.29
LINC00339-210ENST00000635675 BCL2P10415 239 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 CSN1S1P47710 185 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 ATP5G3P48201 142 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 ZFAND6Q6FIF0 208 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 ARL6IP6Q8N6S5 226 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 VGLL1Q99990 258 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 RPH3ALQ9UNE2 315 aa7.01□□□□□ -1.29
LINC00339-210ENST00000635675 YTHDF2Q9Y5A9 579 aaKnown RBP7.01□□□□□ -1.29
LINC00339-210ENST00000635675 TRAV1-1A0A0B4J248 108 aa7□□□□□ -1.29
LINC00339-210ENST00000635675 DIRC3C9JPN6 131 aa7□□□□□ -1.29
LINC00339-210ENST00000635675 SLC25A5P05141 298 aaKnown RBP7□□□□□ -1.29
LINC00339-210ENST00000635675 LEPP41159 167 aa7□□□□□ -1.29
LINC00339-210ENST00000635675 PEA15Q15121 130 aa7□□□□□ -1.29
LINC00339-210ENST00000635675 ZNF506Q5JVG8 444 aa7□□□□□ -1.29
LINC00339-210ENST00000635675 TMEM256Q8N2U0 113 aa7□□□□□ -1.29
LINC00339-210ENST00000635675 C11orf45Q8TAV5 145 aa7□□□□□ -1.29
LINC00339-210ENST00000635675 TMEM208Q9BTX3 173 aa7□□□□□ -1.29
LINC00339-210ENST00000635675 MANBALQ9NQG1 85 aa7□□□□□ -1.29
LINC00339-210ENST00000635675 TMEM167BQ9NRX6 74 aa7□□□□□ -1.29
LINC00339-210ENST00000635675 ZNF492Q9P255 531 aa7□□□□□ -1.29
LINC00339-210ENST00000635675 TRBV7-9A0A0J9YWB2 115 aa6.99□□□□□ -1.29
LINC00339-210ENST00000635675 KLLNB2CW77 178 aa6.99□□□□□ -1.29
LINC00339-210ENST00000635675 PRM2P04554 102 aa6.99□□□□□ -1.29
LINC00339-210ENST00000635675 SFTA3P0C7M3 94 aa6.99□□□□□ -1.29
LINC00339-210ENST00000635675 CRISP2P16562 243 aa6.99□□□□□ -1.29
LINC00339-210ENST00000635675 ZNF138P52744 262 aa6.99□□□□□ -1.29
LINC00339-210ENST00000635675 NANOS2P60321 138 aaKnown RBP6.99□□□□□ -1.29
LINC00339-210ENST00000635675 RRN3P1Q2M238 152 aa6.99□□□□□ -1.29
LINC00339-210ENST00000635675 TMEM78Q5T7P6 136 aa6.99□□□□□ -1.29
LINC00339-210ENST00000635675 GFI1BQ5VTD9 330 aa6.99□□□□□ -1.29
LINC00339-210ENST00000635675 CMTM2Q8TAZ6 248 aa6.99□□□□□ -1.29
LINC00339-210ENST00000635675 C20orf144Q9BQM9 153 aa6.99□□□□□ -1.29
LINC00339-210ENST00000635675 VAX2Q9UIW0 290 aa6.99□□□□□ -1.29
LINC00339-210ENST00000635675 TENM2Q9NT68 2774 aa6.98□□□□□ -1.29
LINC00339-210ENST00000635675 TMEM189A5PLL7 270 aa6.98□□□□□ -1.29
LINC00339-210ENST00000635675 ZNF705GA8MUZ8 300 aaPredicted RBP6.98□□□□□ -1.29
LINC00339-210ENST00000635675 C11orf94C9JXX5 98 aa6.98□□□□□ -1.29
LINC00339-210ENST00000635675 SRP19P09132 144 aaKnown RBP6.98□□□□□ -1.29
LINC00339-210ENST00000635675 TAS2R60P59551 318 aa6.98□□□□□ -1.29
LINC00339-210ENST00000635675 SUMO1P63165 101 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms