RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 SMKR1H3BMG3 65 aa11.84□□□□□ -0.51
LINC00552-201ENST00000625151 PRTN3P24158 256 aa11.84□□□□□ -0.51
LINC00552-201ENST00000625151 OCIAD2Q56VL3 154 aa11.84□□□□□ -0.51
LINC00552-201ENST00000625151 COX8CQ7Z4L0 72 aa11.84□□□□□ -0.51
LINC00552-201ENST00000625151 SMAD5-AS1Q9Y6J3 95 aa11.84□□□□□ -0.51
LINC00552-201ENST00000625151 IGHV3OR16-8A0A075B7F1 116 aa11.84□□□□□ -0.51
LINC00552-201ENST00000625151 M0R1W7 72 aa11.84□□□□□ -0.51
LINC00552-201ENST00000625151 IGHG4P01861 327 aa11.84□□□□□ -0.51
LINC00552-201ENST00000625151 RPL7P18124 248 aaKnown RBP11.84□□□□□ -0.51
LINC00552-201ENST00000625151 RHOGP84095 191 aa11.84□□□□□ -0.51
LINC00552-201ENST00000625151 CTSGP08311 255 aa11.83□□□□□ -0.52
LINC00552-201ENST00000625151 ZNF575Q86XF7 245 aa11.83□□□□□ -0.52
LINC00552-201ENST00000625151 PAX8Q06710 450 aa11.83□□□□□ -0.52
LINC00552-201ENST00000625151 FBXL19-AS1Q494R0 122 aa11.83□□□□□ -0.52
LINC00552-201ENST00000625151 TIMD4Q96H15 378 aa11.83□□□□□ -0.52
LINC00552-201ENST00000625151 CLUHP3Q96NS8 147 aa11.83□□□□□ -0.52
LINC00552-201ENST00000625151 IGHV3-35A0A0C4DH35 117 aa11.82□□□□□ -0.52
LINC00552-201ENST00000625151 CCL21O00585 134 aa11.82□□□□□ -0.52
LINC00552-201ENST00000625151 NPYP01303 97 aa11.82□□□□□ -0.52
LINC00552-201ENST00000625151 FGF6P10767 208 aa11.82□□□□□ -0.52
LINC00552-201ENST00000625151 VMO1Q7Z5L0 202 aa11.82□□□□□ -0.52
LINC00552-201ENST00000625151 Q8N6K4 173 aa11.82□□□□□ -0.52
LINC00552-201ENST00000625151 K7ERU9 68 aa11.82□□□□□ -0.52
LINC00552-201ENST00000625151 CD5LO43866 347 aa11.82□□□□□ -0.52
LINC00552-201ENST00000625151 CACNG7P62955 275 aa11.82□□□□□ -0.52
LINC00552-201ENST00000625151 TWIST1Q15672 202 aa11.82□□□□□ -0.52
LINC00552-201ENST00000625151 FER1L6-AS1Q8NA97 138 aa11.82□□□□□ -0.52
LINC00552-201ENST00000625151 CST9LQ9H4G1 147 aa11.82□□□□□ -0.52
LINC00552-201ENST00000625151 RABAC1Q9UI14 185 aa11.82□□□□□ -0.52
LINC00552-201ENST00000625151 MED13LQ71F56 2210 aa11.81□□□□□ -0.52
LINC00552-201ENST00000625151 TMEM8BA6NDV4 472 aa11.81□□□□□ -0.52
LINC00552-201ENST00000625151 TCTAP57738 103 aa11.81□□□□□ -0.52
LINC00552-201ENST00000625151 AMMECR1LQ6DCA0 310 aa11.81□□□□□ -0.52
LINC00552-201ENST00000625151 THYN1Q9P016 225 aa11.81□□□□□ -0.52
LINC00552-201ENST00000625151 ZFYVE26Q68DK2 2539 aa11.81□□□□□ -0.52
LINC00552-201ENST00000625151 CACNA1BQ00975 2339 aa11.81□□□□□ -0.52
LINC00552-201ENST00000625151 HBDP02042 147 aa11.81□□□□□ -0.52
LINC00552-201ENST00000625151 IGLC6P0CF74 106 aa11.81□□□□□ -0.52
LINC00552-201ENST00000625151 CKS2P33552 79 aa11.81□□□□□ -0.52
LINC00552-201ENST00000625151 ADORA2A-AS1P86434 159 aa11.81□□□□□ -0.52
LINC00552-201ENST00000625151 LGALS9BQ3B8N2 356 aa11.81□□□□□ -0.52
LINC00552-201ENST00000625151 LGALS9CQ6DKI2 356 aa11.81□□□□□ -0.52
LINC00552-201ENST00000625151 PRSS57Q6UWY2 283 aa11.8□□□□□ -0.52
LINC00552-201ENST00000625151 MSRB1Q9NZV6 116 aa11.8□□□□□ -0.52
LINC00552-201ENST00000625151 IGHV7-81A0A0B4J1V7 117 aa11.8□□□□□ -0.52
LINC00552-201ENST00000625151 PSMG3-AS1Q96PY0 264 aa11.8□□□□□ -0.52
LINC00552-201ENST00000625151 ZFHX3Q15911 3703 aa11.8□□□□□ -0.52
LINC00552-201ENST00000625151 CCDC144NLQ6NUI1 221 aa11.79□□□□□ -0.52
LINC00552-201ENST00000625151 DPF1Q92782 380 aa11.79□□□□□ -0.52
LINC00552-201ENST00000625151 HIVEP3Q5T1R4 2406 aa11.79□□□□□ -0.52
LINC00552-201ENST00000625151 TRAV8-6A0A0B4J262 113 aa11.79□□□□□ -0.52
LINC00552-201ENST00000625151 TMEM97Q5BJF2 176 aa11.79□□□□□ -0.52
LINC00552-201ENST00000625151 C11orf71Q6IPW1 123 aa11.79□□□□□ -0.52
LINC00552-201ENST00000625151 GAS8-AS1O95177 125 aa11.78□□□□□ -0.52
LINC00552-201ENST00000625151 UQCRFS1P47985 274 aa11.78□□□□□ -0.52
LINC00552-201ENST00000625151 ERCC8Q13216 396 aa11.78□□□□□ -0.52
LINC00552-201ENST00000625151 EBI3Q14213 229 aa11.78□□□□□ -0.52
LINC00552-201ENST00000625151 PRAC2D3DTV9 90 aa11.78□□□□□ -0.52
LINC00552-201ENST00000625151 ORM1P02763 201 aa11.78□□□□□ -0.52
LINC00552-201ENST00000625151 ZFP36P26651 326 aaKnown RBP11.78□□□□□ -0.52
LINC00552-201ENST00000625151 WFDC3Q8IUB2 231 aa11.78□□□□□ -0.52
LINC00552-201ENST00000625151 IFI27L1Q96BM0 104 aa11.78□□□□□ -0.52
LINC00552-201ENST00000625151 RNF185Q96GF1 192 aa11.78□□□□□ -0.52
LINC00552-201ENST00000625151 FBLL1A6NHQ2 334 aaKnown RBP11.77□□□□□ -0.52
LINC00552-201ENST00000625151 C7orf71A4D174 169 aa11.77□□□□□ -0.53
LINC00552-201ENST00000625151 BOD1L2Q8IYS8 172 aa11.77□□□□□ -0.53
LINC00552-201ENST00000625151 Q8N9W7 124 aa11.77□□□□□ -0.53
LINC00552-201ENST00000625151 OR1N2Q8NGR9 330 aa11.77□□□□□ -0.53
LINC00552-201ENST00000625151 NDUFS7O75251 213 aa11.76□□□□□ -0.53
LINC00552-201ENST00000625151 RNF182Q8N6D2 247 aa11.76□□□□□ -0.53
LINC00552-201ENST00000625151 EPG5Q9HCE0 2579 aa11.76□□□□□ -0.53
LINC00552-201ENST00000625151 SCGB2A1O75556 95 aa11.76□□□□□ -0.53
LINC00552-201ENST00000625151 C15orf32Q32M92 178 aa11.76□□□□□ -0.53
LINC00552-201ENST00000625151 OOSP1A8MZH6 123 aa11.75□□□□□ -0.53
LINC00552-201ENST00000625151 SEC11AP67812 179 aa11.75□□□□□ -0.53
LINC00552-201ENST00000625151 C1orf122Q6ZSJ8 110 aa11.75□□□□□ -0.53
LINC00552-201ENST00000625151 CNFNQ9BYD5 112 aa11.75□□□□□ -0.53
LINC00552-201ENST00000625151 ZFAND3Q9H8U3 227 aa11.75□□□□□ -0.53
LINC00552-201ENST00000625151 DKK2Q9UBU2 259 aa11.75□□□□□ -0.53
LINC00552-201ENST00000625151 PEF1Q9UBV8 284 aaKnown RBP11.75□□□□□ -0.53
LINC00552-201ENST00000625151 FABP5P3A8MUU1 101 aa11.75□□□□□ -0.53
LINC00552-201ENST00000625151 SMAD7O15105 426 aaKnown RBP11.75□□□□□ -0.53
LINC00552-201ENST00000625151 PPIFP30405 207 aaKnown RBP11.75□□□□□ -0.53
LINC00552-201ENST00000625151 SRSF2Q01130 221 aaKnown RBP11.75□□□□□ -0.53
LINC00552-201ENST00000625151 ECSCRQ19T08 205 aa11.75□□□□□ -0.53
LINC00552-201ENST00000625151 MINOS1Q5TGZ0 78 aa11.75□□□□□ -0.53
LINC00552-201ENST00000625151 ZNF502Q8TBZ5 544 aa11.75□□□□□ -0.53
LINC00552-201ENST00000625151 C18orf15Q96N68 181 aa11.75□□□□□ -0.53
LINC00552-201ENST00000625151 MINOS1-NBL1R4GNA1 71 aa11.75□□□□□ -0.53
LINC00552-201ENST00000625151 IGHV3-66A0A0C4DH42 116 aa11.74□□□□□ -0.53
LINC00552-201ENST00000625151 IL17RELQ6ZVW7 336 aa11.74□□□□□ -0.53
LINC00552-201ENST00000625151 BUB3O43684 328 aa11.74□□□□□ -0.53
LINC00552-201ENST00000625151 CLEC3BP05452 202 aa11.74□□□□□ -0.53
LINC00552-201ENST00000625151 GNLYP22749 145 aa11.74□□□□□ -0.53
LINC00552-201ENST00000625151 PCP2Q8IVA1 136 aa11.74□□□□□ -0.53
LINC00552-201ENST00000625151 EVI2AP22794 236 aa11.74□□□□□ -0.53
LINC00552-201ENST00000625151 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.74□□□□□ -0.53
LINC00552-201ENST00000625151 MAP1LC3AQ9H492 121 aa11.74□□□□□ -0.53
LINC00552-201ENST00000625151 SPTBN1Q01082 2364 aaKnown RBP11.73□□□□□ -0.53
LINC00552-201ENST00000625151 IGHV3OR16-13A0A075B7E8 117 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms