RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 CTSGP08311 255 aa5.09□□□□□ -1.6
CDKL5-205ENST00000623535 CXCL5P42830 114 aa5.09□□□□□ -1.6
CDKL5-205ENST00000623535 ZNF124Q15973 351 aa5.09□□□□□ -1.6
CDKL5-205ENST00000623535 A0A087X0M5 115 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 A0A1B0GX30 115 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 TCRBV5S1A1TA0A578 114 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 DUX4L9Q6RFH8 374 aaPredicted RBP5.08□□□□□ -1.6
CDKL5-205ENST00000623535 IFI27L1Q96BM0 104 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 C14orf178Q8N769 122 aaPredicted RBP5.08□□□□□ -1.6
CDKL5-205ENST00000623535 PMS2P5A8MQ11 134 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 XCL1P47992 114 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 HAMPP81172 84 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 IGLV1-36A0A0B4J1U3 117 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 H0Y9J4 135 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 IGKV1-16P04430 117 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 PRB3Q04118 309 aaPredicted RBP5.08□□□□□ -1.6
CDKL5-205ENST00000623535 BVES-AS1Q5T3Y7 98 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 IGKV2D-26A0A0A0MRZ7 120 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 IGHV3-30P01768 117 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 IGHV3-33P01772 117 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 IGHV3-30-3P0DP02 117 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 IGHV3-30-5P0DP03 117 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 PRSS57Q6UWY2 283 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 SPANXA1Q9NS26 97 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 TICRRQ7Z2Z1 1910 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 HOXB4P17483 251 aaPredicted RBP5.08□□□□□ -1.6
CDKL5-205ENST00000623535 GAGE2AQ6NT46 116 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 ZAR1Q86SH2 424 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 CYTL1Q9NRR1 136 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 DAZ2Q13117 558 aaKnown RBP5.08□□□□□ -1.6
CDKL5-205ENST00000623535 DAZ4Q86SG3 579 aaKnown RBP5.08□□□□□ -1.6
CDKL5-205ENST00000623535 RNF185Q96GF1 192 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 DAZ3Q9NR90 486 aaKnown RBP5.08□□□□□ -1.6
CDKL5-205ENST00000623535 PRR13Q9NZ81 148 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 ZNF134P52741 427 aa5.08□□□□□ -1.6
CDKL5-205ENST00000623535 A0A087WWL8 130 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 C17orf98A8MV24 154 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 CLPSL2Q6UWE3 100 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 C2orf82Q6UX34 121 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 IGKV4-1P06312 121 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 FOXA3P55318 350 aaPredicted RBP5.07□□□□□ -1.6
CDKL5-205ENST00000623535 C1orf100Q5SVJ3 147 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 LINC00322Q6ZN03 302 aaPredicted RBP5.07□□□□□ -1.6
CDKL5-205ENST00000623535 A0A1B0GX51 115 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 TRAV10A0A0B4J240 114 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 IGHV3-16A0A0C4DH30 117 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 RNASE2P10153 161 aaKnown RBP5.07□□□□□ -1.6
CDKL5-205ENST00000623535 UBE2D2P62837 147 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 DEFB112Q30KQ8 113 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 Q6ZQT7 251 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 CHCHD1Q96BP2 118 aaKnown RBP5.07□□□□□ -1.6
CDKL5-205ENST00000623535 IGKV2-40A0A087WW87 121 aaPredicted RBP5.07□□□□□ -1.6
CDKL5-205ENST00000623535 A0A087WZ39 114 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 IGKV2D-40P01614 121 aaPredicted RBP5.07□□□□□ -1.6
CDKL5-205ENST00000623535 SAMD5Q5TGI4 173 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 TNFRSF12AQ9NP84 129 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 MGAMO43451 1857 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 DKK1O94907 266 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 PARP14Q460N5 1801 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 C4orf3Q8WVX3 66 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 GZMMP51124 257 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 A8MXK9 166 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 HLA-DRB4P13762 266 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 HLA-DRB4X5D2U9 266 aa5.07□□□□□ -1.6
CDKL5-205ENST00000623535 IGLV3-32A0A0A0MS00 114 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 LINC00337Q8N6G1 96 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 TRACP01848 142 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 TDRG1Q3Y452 100 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 TMEM131Q92545 1883 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 IGHV7-4-1A0A0J9YVY3 117 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 DEFB135Q30KP9 77 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 C14orf132Q9NPU4 83 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 TMEM242Q9NWH2 141 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 GREB1Q4ZG55 1949 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 NCR2O95944 276 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 SEM1Q6ZVN7 128 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 RPP25LQ8N5L8 163 aaKnown RBP5.06□□□□□ -1.6
CDKL5-205ENST00000623535 TM2D1Q9BX74 207 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 KIAA0040Q15053 153 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 MRPL53Q96EL3 112 aaKnown RBP5.06□□□□□ -1.6
CDKL5-205ENST00000623535 IGFBP3P17936 291 aaPredicted RBP5.06□□□□□ -1.6
CDKL5-205ENST00000623535 IL15RAQ13261 267 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 PRR30Q53SZ7 412 aaPredicted RBP5.06□□□□□ -1.6
CDKL5-205ENST00000623535 MIR17HGQ75NE6 70 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 PRO1933Q9H354 126 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 H0YJW9 148 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 CUL9Q8IWT3 2517 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 NPSP0C0P6 89 aa5.06□□□□□ -1.6
CDKL5-205ENST00000623535 KIAA1551Q9HCM1 1747 aa5.05□□□□□ -1.6
CDKL5-205ENST00000623535 IGHV2-5P01817 119 aa5.05□□□□□ -1.6
CDKL5-205ENST00000623535 MED13LQ71F56 2210 aa5.05□□□□□ -1.6
CDKL5-205ENST00000623535 GPR179Q6PRD1 2367 aa5.05□□□□□ -1.6
CDKL5-205ENST00000623535 PRR15LQ9BU68 103 aa5.05□□□□□ -1.6
CDKL5-205ENST00000623535 HHLA3Q9XRX5 114 aa5.05□□□□□ -1.6
CDKL5-205ENST00000623535 DAZAP2Q15038 168 aaPredicted RBP5.05□□□□□ -1.6
CDKL5-205ENST00000623535 LOXP28300 417 aaPredicted RBP5.05□□□□□ -1.6
CDKL5-205ENST00000623535 CTHRC1Q96CG8 243 aa5.05□□□□□ -1.6
CDKL5-205ENST00000623535 GAFA1Q96PS6 74 aa5.05□□□□□ -1.6
CDKL5-205ENST00000623535 CCL20P78556 96 aa5.05□□□□□ -1.6
CDKL5-205ENST00000623535 KNCNA6PVL3 124 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms