RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 FAM25EA8MYX2 175 aa16.28■□□□□ 0.2
CPSF1-214ENST00000622776 SPINK4O60575 86 aa16.28■□□□□ 0.2
CPSF1-214ENST00000622776 NDUFB4O95168 129 aa16.28■□□□□ 0.2
CPSF1-214ENST00000622776 RNASE4P34096 147 aaKnown RBP16.28■□□□□ 0.2
CPSF1-214ENST00000622776 VWC2Q2TAL6 325 aa16.28■□□□□ 0.2
CPSF1-214ENST00000622776 AGPAT4-IT1Q9H0P7 198 aa16.28■□□□□ 0.2
CPSF1-214ENST00000622776 C20orf85Q9H1P6 137 aa16.28■□□□□ 0.2
CPSF1-214ENST00000622776 PGPEP1Q9NXJ5 209 aa16.28■□□□□ 0.2
CPSF1-214ENST00000622776 TMEM14CQ9P0S9 112 aa16.28■□□□□ 0.2
CPSF1-214ENST00000622776 PRELID1Q9Y255 219 aa16.28■□□□□ 0.2
CPSF1-214ENST00000622776 PAX4O43316 350 aa16.27■□□□□ 0.2
CPSF1-214ENST00000622776 NXPH4O95158 308 aa16.27■□□□□ 0.2
CPSF1-214ENST00000622776 HIST1H1EP10412 219 aaKnown RBP16.27■□□□□ 0.2
CPSF1-214ENST00000622776 TCL1AP56279 114 aa16.27■□□□□ 0.2
CPSF1-214ENST00000622776 ICOSQ9Y6W8 199 aa16.27■□□□□ 0.2
CPSF1-214ENST00000622776 EPM2AB3EWF7 344 aa16.26■□□□□ 0.19
CPSF1-214ENST00000622776 MPDU1O75352 247 aa16.26■□□□□ 0.19
CPSF1-214ENST00000622776 IL7P13232 177 aa16.26■□□□□ 0.19
CPSF1-214ENST00000622776 BAXQ07812 192 aa16.26■□□□□ 0.19
CPSF1-214ENST00000622776 TIMM9Q9Y5J7 89 aa16.26■□□□□ 0.19
CPSF1-214ENST00000622776 UBE2L5PA0A1B0GUS4 154 aa16.25■□□□□ 0.19
CPSF1-214ENST00000622776 C5orf51A6NDU8 294 aa16.25■□□□□ 0.19
CPSF1-214ENST00000622776 GPX1P07203 203 aa16.25■□□□□ 0.19
CPSF1-214ENST00000622776 CRISP2P16562 243 aa16.25■□□□□ 0.19
CPSF1-214ENST00000622776 PDE6HQ13956 83 aa16.25■□□□□ 0.19
CPSF1-214ENST00000622776 IBA57Q5T440 356 aaKnown RBP16.25■□□□□ 0.19
CPSF1-214ENST00000622776 CHAC2Q8WUX2 184 aa16.25■□□□□ 0.19
CPSF1-214ENST00000622776 ST6GAL2Q96JF0 529 aa16.25■□□□□ 0.19
CPSF1-214ENST00000622776 EREGO14944 169 aa16.24■□□□□ 0.19
CPSF1-214ENST00000622776 IGHV3-53P01767 116 aa16.24■□□□□ 0.19
CPSF1-214ENST00000622776 PYYP10082 97 aa16.24■□□□□ 0.19
CPSF1-214ENST00000622776 PVALBP20472 110 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-214ENST00000622776 S100A11P31949 105 aa16.24■□□□□ 0.19
CPSF1-214ENST00000622776 FUSP35637 526 aaKnown RBP eCLIP16.24■□□□□ 0.19
CPSF1-214ENST00000622776 SULT1A1P50225 295 aa16.24■□□□□ 0.19
CPSF1-214ENST00000622776 C9orf47Q6ZRZ4 202 aa16.24■□□□□ 0.19
CPSF1-214ENST00000622776 EXOC3-AS1Q8N2X6 119 aa16.24■□□□□ 0.19
CPSF1-214ENST00000622776 PTTG2Q9NZH5 202 aa16.24■□□□□ 0.19
CPSF1-214ENST00000622776 FAT1Q14517 4588 aa16.24■□□□□ 0.19
CPSF1-214ENST00000622776 NMBP08949 121 aa16.23■□□□□ 0.19
CPSF1-214ENST00000622776 ERVFC1-1P60608 527 aa16.23■□□□□ 0.19
CPSF1-214ENST00000622776 ZFAND2AQ8N6M9 145 aa16.23■□□□□ 0.19
CPSF1-214ENST00000622776 BLNKQ8WV28 456 aa16.23■□□□□ 0.19
CPSF1-214ENST00000622776 C2orf50Q96LR7 162 aa16.23■□□□□ 0.19
CPSF1-214ENST00000622776 LYRM2Q9NU23 88 aaPredicted RBP16.23■□□□□ 0.19
CPSF1-214ENST00000622776 PRO0255Q9UI72 69 aa16.23■□□□□ 0.19
CPSF1-214ENST00000622776 TP53TG3Q9ULZ0 132 aa16.23■□□□□ 0.19
CPSF1-214ENST00000622776 TNFRSF18Q9Y5U5 241 aa16.23■□□□□ 0.19
CPSF1-214ENST00000622776 IGSF23A1L1A6 192 aa16.22■□□□□ 0.19
CPSF1-214ENST00000622776 RGS13O14921 159 aa16.22■□□□□ 0.19
CPSF1-214ENST00000622776 PLA2G10O15496 165 aa16.22■□□□□ 0.19
CPSF1-214ENST00000622776 FGF7P21781 194 aa16.22■□□□□ 0.19
CPSF1-214ENST00000622776 TMEM252Q8N6L7 170 aa16.22■□□□□ 0.19
CPSF1-214ENST00000622776 AAMDCQ9H7C9 122 aa16.22■□□□□ 0.19
CPSF1-214ENST00000622776 MRPL16Q9NX20 251 aaKnown RBP16.22■□□□□ 0.19
CPSF1-214ENST00000622776 IGKV2-40A0A087WW87 121 aaPredicted RBP16.21■□□□□ 0.19
CPSF1-214ENST00000622776 IGKV2D-40P01614 121 aaPredicted RBP16.21■□□□□ 0.19
CPSF1-214ENST00000622776 HBG1P69891 147 aa16.21■□□□□ 0.19
CPSF1-214ENST00000622776 HBG2P69892 147 aa16.21■□□□□ 0.19
CPSF1-214ENST00000622776 SLAQ13239 276 aa16.21■□□□□ 0.19
CPSF1-214ENST00000622776 ICAM4Q14773 271 aa16.21■□□□□ 0.19
CPSF1-214ENST00000622776 PRR9Q5T870 116 aa16.21■□□□□ 0.19
CPSF1-214ENST00000622776 CDPF1Q6NVV7 123 aa16.21■□□□□ 0.19
CPSF1-214ENST00000622776 VGLL1Q99990 258 aa16.21■□□□□ 0.19
CPSF1-214ENST00000622776 SEC22CQ9BRL7 303 aa16.21■□□□□ 0.19
CPSF1-214ENST00000622776 TRAV6A0A075B6T7 132 aa16.2■□□□□ 0.18
CPSF1-214ENST00000622776 IGHV1OR15-1A0A075B7D0 117 aa16.2■□□□□ 0.18
CPSF1-214ENST00000622776 TCRBP04435 133 aa16.2■□□□□ 0.18
CPSF1-214ENST00000622776 CRYBA4P53673 196 aa16.2■□□□□ 0.18
CPSF1-214ENST00000622776 S100A10P60903 97 aa16.2■□□□□ 0.18
CPSF1-214ENST00000622776 MRPL23Q16540 153 aaKnown RBP16.2■□□□□ 0.18
CPSF1-214ENST00000622776 GCSAMLQ5JQS6 135 aa16.2■□□□□ 0.18
CPSF1-214ENST00000622776 TMEM78Q5T7P6 136 aa16.2■□□□□ 0.18
CPSF1-214ENST00000622776 LYPD5Q6UWN5 251 aa16.2■□□□□ 0.18
CPSF1-214ENST00000622776 Q6ZQT7 251 aa16.2■□□□□ 0.18
CPSF1-214ENST00000622776 NFE4Q86UQ8 179 aa16.2■□□□□ 0.18
CPSF1-214ENST00000622776 STX12Q86Y82 276 aa16.2■□□□□ 0.18
CPSF1-214ENST00000622776 LYPD1Q8N2G4 141 aa16.2■□□□□ 0.18
CPSF1-214ENST00000622776 C8orf49Q96NF6 230 aa16.2■□□□□ 0.18
CPSF1-214ENST00000622776 HHLA3Q9XRX5 114 aa16.2■□□□□ 0.18
CPSF1-214ENST00000622776 LYRM1O43325 122 aa16.19■□□□□ 0.18
CPSF1-214ENST00000622776 PRAF2O60831 178 aa16.19■□□□□ 0.18
CPSF1-214ENST00000622776 XGP55808 180 aa16.19■□□□□ 0.18
CPSF1-214ENST00000622776 IL15RAQ13261 267 aa16.19■□□□□ 0.18
CPSF1-214ENST00000622776 FHL2Q14192 279 aa16.19■□□□□ 0.18
CPSF1-214ENST00000622776 ATP6V1FQ16864 119 aa16.19■□□□□ 0.18
CPSF1-214ENST00000622776 FAM122CQ6P4D5 195 aa16.19■□□□□ 0.18
CPSF1-214ENST00000622776 ARPC5LQ9BPX5 153 aa16.19■□□□□ 0.18
CPSF1-214ENST00000622776 RAB32Q13637 225 aa16.18■□□□□ 0.18
CPSF1-214ENST00000622776 SLC25A2Q9BXI2 301 aa16.18■□□□□ 0.18
CPSF1-214ENST00000622776 ZNF492Q9P255 531 aa16.18■□□□□ 0.18
CPSF1-214ENST00000622776 FLG2Q5D862 2391 aaPredicted RBP16.18■□□□□ 0.18
CPSF1-214ENST00000622776 INAFM2P0DMQ5 153 aa16.17■□□□□ 0.18
CPSF1-214ENST00000622776 NEGR1Q7Z3B1 354 aa16.17■□□□□ 0.18
CPSF1-214ENST00000622776 FAM167A-AS1Q96KT0 104 aa16.17■□□□□ 0.18
CPSF1-214ENST00000622776 GPN1Q9HCN4 374 aaPredicted RBP16.17■□□□□ 0.18
CPSF1-214ENST00000622776 TRAV9-2A0A087WT02 112 aa16.16■□□□□ 0.18
CPSF1-214ENST00000622776 A0A087WTM6 91 aa16.16■□□□□ 0.18
CPSF1-214ENST00000622776 NBEAP1P0C6P0 100 aa16.16■□□□□ 0.18
CPSF1-214ENST00000622776 DNAH10OSP0CZ25 163 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms