RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 TRAV8-4A0A0B4J246 113 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 IGHV3-64DA0A0J9YX35 117 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 C9JAW5 83 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 ZFAND5O76080 213 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 NPYP01303 97 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 SRSF9Q13242 221 aaKnown RBP eCLIP6.28□□□□□ -1.4
VPS11-209ENST00000622309 CHCHD5Q9BSY4 110 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 BEX4Q9NWD9 120 aaPredicted RBP6.28□□□□□ -1.4
VPS11-209ENST00000622309 HIGD1AQ9Y241 93 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 PLXNB1O43157 2135 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 TMEM213A2RRL7 107 aa6.27□□□□□ -1.4
VPS11-209ENST00000622309 TCL1BO95988 128 aa6.27□□□□□ -1.4
VPS11-209ENST00000622309 C9orf153Q5TBE3 101 aa6.27□□□□□ -1.4
VPS11-209ENST00000622309 C10orf126Q8N4M7 172 aa6.27□□□□□ -1.4
VPS11-209ENST00000622309 RITA1Q96K30 269 aa6.27□□□□□ -1.4
VPS11-209ENST00000622309 LINC01587Q99440 93 aa6.27□□□□□ -1.4
VPS11-209ENST00000622309 SIGLEC9Q9Y336 463 aa6.27□□□□□ -1.4
VPS11-209ENST00000622309 SPTBN2O15020 2390 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 TRAV2A0A0B4J234 112 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 IGHV5-10-1A0A0J9YXX1 117 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 TCRAP04437 139 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 FAM104BQ5XKR9 115 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 Q8NA96 180 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 OR11H6Q8NGC7 330 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 C2orf48Q96LS8 159 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 ZNF714Q96N38 554 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 RTL8AQ9BWD3 113 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 IFI27L2Q9H2X8 130 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 CALYQ9NYX4 217 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 PROCRQ9UNN8 238 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 FOXA2Q9Y261 457 aaPredicted RBP6.27□□□□□ -1.41
VPS11-209ENST00000622309 A0A096LPE4 126 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 A0A1W2PPZ6 126 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 NPFFO15130 113 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 SLC25A20O43772 301 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 PSPNO60542 156 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 MYCNOSP40205 109 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 LINC00305Q7Z4B0 112 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 GATD1Q8NB37 220 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 SRXN1Q9BYN0 137 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 ARRDC1-AS1Q9H2J1 176 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 RAXQ9Y2V3 346 aa6.27□□□□□ -1.41
VPS11-209ENST00000622309 CCL11P51671 97 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 UBE2D3P61077 147 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 UBE2D2P62837 147 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 FOXC1Q12948 553 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 LINC01559Q495D7 138 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 SBSPONQ8IVN8 264 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 RNF138Q8WVD3 245 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 TRGV9Q99603 122 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 COL5A1P20908 1838 aaPredicted RBP6.26□□□□□ -1.41
VPS11-209ENST00000622309 EML6Q6ZMW3 1958 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 SMKR1H3BMG3 65 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 H3BTX0 84 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 CCL4P13236 92 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 FOXG1P55316 489 aaPredicted RBP6.26□□□□□ -1.41
VPS11-209ENST00000622309 MRPL51Q4U2R6 128 aaKnown RBP6.26□□□□□ -1.41
VPS11-209ENST00000622309 TMEM155Q4W5P6 130 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 RPL39P5Q59GN2 51 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 PLA2G2CQ5R387 149 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 FAM57AQ8TBR7 257 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 MED13Q9UHV7 2174 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 NDUFA3O95167 84 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 ORM1P02763 201 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 ORM2P19652 201 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 SCGB1D4Q6XE38 83 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 Q86TA4 180 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 NPIPB3Q92617 1050 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 TMEM14BQ9NUH8 114 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 MRPL35Q9NZE8 188 aaKnown RBP6.26□□□□□ -1.41
VPS11-209ENST00000622309 U3KQK5 164 aa6.26□□□□□ -1.41
VPS11-209ENST00000622309 LY6G6EA0A0G2JKS1 128 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 DUSP14O95147 198 aaKnown RBP6.25□□□□□ -1.41
VPS11-209ENST00000622309 IGHV3-13P01766 116 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 ZNF493Q6ZR52 646 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 NFAM1Q8NET5 270 aaPredicted RBP6.25□□□□□ -1.41
VPS11-209ENST00000622309 DUX3Q96PT4 197 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 PRADC1Q9BSG0 188 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 Q9H3A6 140 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 PROK2Q9HC23 129 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 U3KQA8 63 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 CFAP47Q6ZTR5 3102 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 LINC01619G3V211 115 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 GRPP07492 148 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 SSR4P51571 173 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 PAX8Q06710 450 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 PATE2Q6UY27 113 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 MYOZ3Q8TDC0 251 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 ADAMTS20P59510 1910 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 FREM1Q5H8C1 2179 aa6.25□□□□□ -1.41
VPS11-209ENST00000622309 PROP1O75360 226 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 CCL3P10147 92 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 C2orf83Q53S99 150 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 SPRNQ5BIV9 151 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 C6orf226Q5I0X4 101 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 DGAT2L7PQ6IED9 249 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 GOLT1AQ6ZVE7 132 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 OR13A1Q8NGR1 328 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 NTN5Q8WTR8 489 aaPredicted RBP6.24□□□□□ -1.41
VPS11-209ENST00000622309 TET2Q6N021 2002 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms