RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 C11orf68Q9H3H3 251 aaKnown RBP8.4□□□□□ -1.06
COL25A1-209ENST00000622134 LINC00527Q9UJ94 153 aa8.4□□□□□ -1.06
COL25A1-209ENST00000622134 LTBP2Q14767 1821 aa8.4□□□□□ -1.06
COL25A1-209ENST00000622134 RNASE4P34096 147 aaKnown RBP8.4□□□□□ -1.07
COL25A1-209ENST00000622134 ZNF415Q09FC8 603 aa8.4□□□□□ -1.07
COL25A1-209ENST00000622134 ARTNQ5T4W7 220 aa8.4□□□□□ -1.07
COL25A1-209ENST00000622134 C5orf24Q7Z6I8 188 aa8.4□□□□□ -1.07
COL25A1-209ENST00000622134 VPREB3Q9UKI3 123 aa8.4□□□□□ -1.07
COL25A1-209ENST00000622134 VWC2Q2TAL6 325 aa8.4□□□□□ -1.07
COL25A1-209ENST00000622134 FOXI2Q6ZQN5 318 aa8.4□□□□□ -1.07
COL25A1-209ENST00000622134 LYPD1Q8N2G4 141 aa8.4□□□□□ -1.07
COL25A1-209ENST00000622134 PLEKHB2Q96CS7 222 aa8.4□□□□□ -1.07
COL25A1-209ENST00000622134 ZNF407Q9C0G0 2248 aa8.39□□□□□ -1.07
COL25A1-209ENST00000622134 CD7P09564 240 aa8.39□□□□□ -1.07
COL25A1-209ENST00000622134 WFDC12Q8WWY7 111 aa8.39□□□□□ -1.07
COL25A1-209ENST00000622134 C12orf74Q32Q52 190 aa8.39□□□□□ -1.07
COL25A1-209ENST00000622134 GAGE2AQ6NT46 116 aa8.39□□□□□ -1.07
COL25A1-209ENST00000622134 NOTCH2Q04721 2471 aa8.39□□□□□ -1.07
COL25A1-209ENST00000622134 MYLKQ15746 1914 aa8.39□□□□□ -1.07
COL25A1-209ENST00000622134 NCR2O95944 276 aa8.39□□□□□ -1.07
COL25A1-209ENST00000622134 S100A7L2Q5SY68 101 aa8.39□□□□□ -1.07
COL25A1-209ENST00000622134 ZGRF1Q86YA3 2104 aa8.39□□□□□ -1.07
COL25A1-209ENST00000622134 LINC00477Q96M19 166 aa8.38□□□□□ -1.07
COL25A1-209ENST00000622134 ZNF747Q9BV97 191 aa8.38□□□□□ -1.07
COL25A1-209ENST00000622134 LSM4Q9Y4Z0 139 aaKnown RBP8.38□□□□□ -1.07
COL25A1-209ENST00000622134 GHRHP01286 108 aa8.38□□□□□ -1.07
COL25A1-209ENST00000622134 ADORA2A-AS1P86434 159 aa8.38□□□□□ -1.07
COL25A1-209ENST00000622134 WDR81Q562E7 1941 aa8.38□□□□□ -1.07
COL25A1-209ENST00000622134 NOTCH4Q99466 2003 aa8.38□□□□□ -1.07
COL25A1-209ENST00000622134 SHISA9B4DS77 424 aa8.38□□□□□ -1.07
COL25A1-209ENST00000622134 SUMO2P61956 95 aaKnown RBP8.38□□□□□ -1.07
COL25A1-209ENST00000622134 PRB3Q04118 309 aaPredicted RBP8.38□□□□□ -1.07
COL25A1-209ENST00000622134 OR11H6Q8NGC7 330 aa8.38□□□□□ -1.07
COL25A1-209ENST00000622134 DOCK9Q9BZ29 2069 aa8.38□□□□□ -1.07
COL25A1-209ENST00000622134 LGALS1P09382 135 aaKnown RBP8.38□□□□□ -1.07
COL25A1-209ENST00000622134 LINC01545Q5VT33 79 aa8.38□□□□□ -1.07
COL25A1-209ENST00000622134 FAM104BQ5XKR9 115 aa8.38□□□□□ -1.07
COL25A1-209ENST00000622134 Q86TA4 180 aa8.38□□□□□ -1.07
COL25A1-209ENST00000622134 MAPK1IP1LQ8NDC0 245 aa8.38□□□□□ -1.07
COL25A1-209ENST00000622134 C10orf105Q8TEF2 133 aa8.38□□□□□ -1.07
COL25A1-209ENST00000622134 K7EN84 100 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 LOXP28300 417 aaPredicted RBP8.37□□□□□ -1.07
COL25A1-209ENST00000622134 PMVKQ15126 192 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 PRSS57Q6UWY2 283 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 AMN1Q8IY45 258 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 IGKV1-6A0A0C4DH72 117 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 MYMXA0A1B0GTQ4 84 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 ARMS2P0C7Q2 107 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 FXYD7P58549 80 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 RUSC1-AS1Q66K80 236 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 ZNF581Q9P0T4 197 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 FANCMQ8IYD8 2048 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 CACNA1AO00555 2505 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 LRRK1Q38SD2 2015 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 TRACP01848 142 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 LINC00479Q96M42 142 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 DOCK7Q96N67 2140 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 NDUFB8O95169 186 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 AMTNQ6UX39 209 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 SH2D6Q7Z4S9 175 aa8.37□□□□□ -1.07
COL25A1-209ENST00000622134 A0A087WX48 190 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 TRAV12-3A0A0B4J271 114 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 C5orf63A6NC05 138 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 IGLL5B9A064 214 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 SLC25A20O43772 301 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 ATP6V0E2Q8NHE4 81 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 RHPN1-AS1Q9BWJ2 59 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 MED12Q93074 2177 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 K7EM74 188 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 PRR31Q5SQ13 230 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 GGTLC3B5MD39 225 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 IGKV1-39P01597 117 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 TFF1P04155 84 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 IGKV1D-39P04432 117 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 C8orf31Q8N9H6 132 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 IGHV3OR16-8A0A075B7F1 116 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 K7ERJ3 54 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 C9orf66Q5T8R8 295 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 Q71RC1 249 aaPredicted RBP8.36□□□□□ -1.07
COL25A1-209ENST00000622134 TMEM86BQ8N661 226 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 HIGD1BQ9P298 99 aa8.36□□□□□ -1.07
COL25A1-209ENST00000622134 LINC00473A8K010 186 aa8.35□□□□□ -1.07
COL25A1-209ENST00000622134 RNF138Q8WVD3 245 aa8.35□□□□□ -1.07
COL25A1-209ENST00000622134 WNK2Q9Y3S1 2297 aa8.35□□□□□ -1.07
COL25A1-209ENST00000622134 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.35□□□□□ -1.07
COL25A1-209ENST00000622134 NEGR1Q7Z3B1 354 aa8.35□□□□□ -1.07
COL25A1-209ENST00000622134 C15orf53Q8NAA6 179 aa8.35□□□□□ -1.07
COL25A1-209ENST00000622134 RBMY1BA6NDE4 496 aaKnown RBP8.35□□□□□ -1.07
COL25A1-209ENST00000622134 RBMY1EA6NEQ0 496 aaKnown RBP8.35□□□□□ -1.07
COL25A1-209ENST00000622134 NPYP01303 97 aa8.35□□□□□ -1.07
COL25A1-209ENST00000622134 RBMY1DP0C7P1 496 aaKnown RBP8.35□□□□□ -1.07
COL25A1-209ENST00000622134 RBMY1A1P0DJD3 496 aaKnown RBP8.35□□□□□ -1.07
COL25A1-209ENST00000622134 RBMY1CP0DJD4 496 aa8.35□□□□□ -1.07
COL25A1-209ENST00000622134 INAFM2P0DMQ5 153 aa8.35□□□□□ -1.07
COL25A1-209ENST00000622134 SYNJ2BPP57105 145 aa8.35□□□□□ -1.07
COL25A1-209ENST00000622134 RPL36AP83881 106 aaKnown RBP8.35□□□□□ -1.07
COL25A1-209ENST00000622134 RPL36ALQ969Q0 106 aaKnown RBP8.35□□□□□ -1.07
COL25A1-209ENST00000622134 TRBV7-9A0A0J9YWB2 115 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 PRSS46E5RG02 174 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 OVOL2Q9BRP0 275 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms