RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	C20orf78	Q9BR46	151 aa		11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045	SHANK2-AS3	Q9BTD1	123 aa		11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045	SMPX	Q9UHP9	88 aa		11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045	AGRN	O00468	2067 aa		11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045		A0A1B0GW15	77 aa		11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045	IGKV2D-40	P01614	121 aa	Predicted RBP	11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045	CRYBA4	P53673	196 aa		11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045	FOXI2	Q6ZQN5	318 aa		11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045	CEND1	Q8N111	149 aa		11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045	SPEN	Q96T58	3664 aa	Known RBP	11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045	DLX6	P56179	175 aa		11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045	HES1	Q14469	280 aa		11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045	ODF1	Q14990	250 aa		11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045		Q6ZS92	163 aa		11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045	MAPKAPK5-AS1	Q8N8E1	139 aa		11.29	□□□□□ -0.6
SYNRG-231	ENST00000622045	LAMA5	O15230	3695 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045		A0A0G2JNJ9	132 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045	BUB1B-PAK6	H3BSN5	160 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045		I3L2K1	104 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045	GAGE13	Q4V321	117 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045		Q6AWC8	147 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045		Q9UFV3	132 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045	HHLA3	Q9XRX5	114 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045	TRAV40	A0A0B4J280	105 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045	IGKC	P01834	107 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045	SIGLEC15	Q6ZMC9	328 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045	TMEM8B	A6NDV4	472 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045	NPIPB5	A8MRT5	1133 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045	ZNF493	Q6ZR52	646 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045	HIST1H4G	Q99525	98 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045	KALRN	O60229	2985 aa		11.28	□□□□□ -0.6
SYNRG-231	ENST00000622045		E9PLD3	99 aa		11.27	□□□□□ -0.6
SYNRG-231	ENST00000622045	NDUFS8	O00217	210 aa		11.27	□□□□□ -0.6
SYNRG-231	ENST00000622045	ONECUT1	Q9UBC0	465 aa		11.27	□□□□□ -0.6
SYNRG-231	ENST00000622045		F8W1H4	67 aa		11.27	□□□□□ -0.61
SYNRG-231	ENST00000622045		U3KQK5	164 aa		11.27	□□□□□ -0.61
SYNRG-231	ENST00000622045	CEACAM4	O75871	244 aa		11.27	□□□□□ -0.61
SYNRG-231	ENST00000622045	C12orf74	Q32Q52	190 aa		11.27	□□□□□ -0.61
SYNRG-231	ENST00000622045	GEMIN7	Q9H840	131 aa	Known RBP	11.27	□□□□□ -0.61
SYNRG-231	ENST00000622045	CRYGB	P07316	175 aa		11.26	□□□□□ -0.61
SYNRG-231	ENST00000622045	PAX8	Q06710	450 aa		11.26	□□□□□ -0.61
SYNRG-231	ENST00000622045	ZNF491	Q8N8L2	437 aa		11.26	□□□□□ -0.61
SYNRG-231	ENST00000622045	TMEM158	Q8WZ71	300 aa		11.26	□□□□□ -0.61
SYNRG-231	ENST00000622045	MAP1LC3A	Q9H492	121 aa		11.26	□□□□□ -0.61
SYNRG-231	ENST00000622045	ORM1	P02763	201 aa		11.26	□□□□□ -0.61
SYNRG-231	ENST00000622045	THBD	P07204	575 aa		11.26	□□□□□ -0.61
SYNRG-231	ENST00000622045	EGR2	P11161	476 aa	Predicted RBP	11.26	□□□□□ -0.61
SYNRG-231	ENST00000622045	HOXB4	P17483	251 aa	Predicted RBP	11.26	□□□□□ -0.61
SYNRG-231	ENST00000622045	GATD1	Q8NB37	220 aa		11.26	□□□□□ -0.61
SYNRG-231	ENST00000622045	PVRIG	Q6DKI7	326 aa		11.25	□□□□□ -0.61
SYNRG-231	ENST00000622045	SPATA25	Q9BR10	227 aa		11.25	□□□□□ -0.61
SYNRG-231	ENST00000622045	KAAG1	Q9UBP8	84 aa		11.25	□□□□□ -0.61
SYNRG-231	ENST00000622045		H3BRN7	92 aa		11.25	□□□□□ -0.61
SYNRG-231	ENST00000622045		K7EIM0	57 aa		11.25	□□□□□ -0.61
SYNRG-231	ENST00000622045	TIMM23	O14925	209 aa		11.25	□□□□□ -0.61
SYNRG-231	ENST00000622045	NDUFA3	O95167	84 aa		11.25	□□□□□ -0.61
SYNRG-231	ENST00000622045	IGLV1-47	P01700	117 aa		11.25	□□□□□ -0.61
SYNRG-231	ENST00000622045	IGFL3	Q6UXB1	125 aa		11.25	□□□□□ -0.61
SYNRG-231	ENST00000622045	LYPD1	Q8N2G4	141 aa		11.25	□□□□□ -0.61
SYNRG-231	ENST00000622045	IGFBPL1	Q8WX77	278 aa		11.25	□□□□□ -0.61
SYNRG-231	ENST00000622045	MRPL35	Q9NZE8	188 aa	Known RBP	11.25	□□□□□ -0.61
SYNRG-231	ENST00000622045	IGHV3OR16-8	A0A075B7F1	116 aa		11.24	□□□□□ -0.61
SYNRG-231	ENST00000622045	DPM2	O94777	84 aa		11.24	□□□□□ -0.61
SYNRG-231	ENST00000622045	SPTBN1	Q01082	2364 aa	Known RBP	11.24	□□□□□ -0.61
SYNRG-231	ENST00000622045	TACC2	O95359	2948 aa		11.24	□□□□□ -0.61
SYNRG-231	ENST00000622045	TNFRSF13B	O14836	293 aa	Predicted RBP	11.24	□□□□□ -0.61
SYNRG-231	ENST00000622045	IGHV3-23	P01764	117 aa		11.24	□□□□□ -0.61
SYNRG-231	ENST00000622045	HIGD1B	Q9P298	99 aa		11.24	□□□□□ -0.61
SYNRG-231	ENST00000622045	APOM	O95445	188 aa		11.24	□□□□□ -0.61
SYNRG-231	ENST00000622045	GFRAL	Q6UXV0	394 aa		11.24	□□□□□ -0.61
SYNRG-231	ENST00000622045	PIP4P1	Q86T03	277 aa		11.24	□□□□□ -0.61
SYNRG-231	ENST00000622045	SYT8	Q8NBV8	401 aa		11.24	□□□□□ -0.61
SYNRG-231	ENST00000622045		E7EQL1	145 aa		11.23	□□□□□ -0.61
SYNRG-231	ENST00000622045	ZNF80	P51504	273 aa	Predicted RBP	11.23	□□□□□ -0.61
SYNRG-231	ENST00000622045	IGHV3-35	A0A0C4DH35	117 aa		11.23	□□□□□ -0.61
SYNRG-231	ENST00000622045	TM2D2	Q9BX73	214 aa		11.23	□□□□□ -0.61
SYNRG-231	ENST00000622045	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.23	□□□□□ -0.61
SYNRG-231	ENST00000622045	TRBV6-1	A0A0K0K1D8	114 aa		11.23	□□□□□ -0.61
SYNRG-231	ENST00000622045	TNFRSF6B	O95407	300 aa		11.23	□□□□□ -0.61
SYNRG-231	ENST00000622045	TTC9C	Q8N5M4	171 aa		11.23	□□□□□ -0.61
SYNRG-231	ENST00000622045	HLA-DMB	P28068	263 aa		11.22	□□□□□ -0.61
SYNRG-231	ENST00000622045	GLMP	Q8WWB7	406 aa		11.22	□□□□□ -0.61
SYNRG-231	ENST00000622045	MRAP2	Q96G30	205 aa		11.22	□□□□□ -0.61
SYNRG-231	ENST00000622045	NCBP2L	A6PVI3	153 aa	Known RBP	11.22	□□□□□ -0.61
SYNRG-231	ENST00000622045	CUL9	Q8IWT3	2517 aa		11.22	□□□□□ -0.61
SYNRG-231	ENST00000622045	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.22	□□□□□ -0.61
SYNRG-231	ENST00000622045	MFAP4	P55083	255 aa		11.22	□□□□□ -0.61
SYNRG-231	ENST00000622045	ZNF418	Q8TF45	676 aa	Predicted RBP	11.22	□□□□□ -0.61
SYNRG-231	ENST00000622045	SPINK8	P0C7L1	97 aa		11.21	□□□□□ -0.61
SYNRG-231	ENST00000622045	KLK15	Q9H2R5	256 aa		11.21	□□□□□ -0.61
SYNRG-231	ENST00000622045	CYSLTR1	Q9Y271	337 aa		11.21	□□□□□ -0.61
SYNRG-231	ENST00000622045	MT-ATP8	P03928	68 aa		11.21	□□□□□ -0.61
SYNRG-231	ENST00000622045	PTH2	Q96A98	100 aa		11.21	□□□□□ -0.61
SYNRG-231	ENST00000622045	RRN3P1	Q2M238	152 aa		11.21	□□□□□ -0.62
SYNRG-231	ENST00000622045	ARHGAP32	A7KAX9	2087 aa		11.2	□□□□□ -0.62
SYNRG-231	ENST00000622045	NBR2	O15453	112 aa		11.2	□□□□□ -0.62
SYNRG-231	ENST00000622045	TGFA	P01135	160 aa		11.2	□□□□□ -0.62
SYNRG-231	ENST00000622045	GATA3	P23771	443 aa		11.2	□□□□□ -0.62
SYNRG-231	ENST00000622045	EFNA4	P52798	201 aa		11.2	□□□□□ -0.62

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