RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 LY6G6EA0A0G2JKS1 128 aa11.25□□□□□ -0.61
SYN2-205ENST00000620175 RPL13AP40429 203 aaKnown RBP11.25□□□□□ -0.61
SYN2-205ENST00000620175 SPAG8Q99932 426 aaPredicted RBP11.25□□□□□ -0.61
SYN2-205ENST00000620175 U3KQA8 63 aa11.25□□□□□ -0.61
SYN2-205ENST00000620175 TNFRSF6BO95407 300 aa11.25□□□□□ -0.61
SYN2-205ENST00000620175 IGHV1-46P01743 117 aa11.25□□□□□ -0.61
SYN2-205ENST00000620175 HERVK_113P61574 105 aa11.25□□□□□ -0.61
SYN2-205ENST00000620175 C2orf91Q6ZV80 131 aa11.25□□□□□ -0.61
SYN2-205ENST00000620175 RITA1Q96K30 269 aa11.25□□□□□ -0.61
SYN2-205ENST00000620175 GAGE2BQ13066 116 aa11.25□□□□□ -0.61
SYN2-205ENST00000620175 GAGE2EQ4V326 116 aa11.25□□□□□ -0.61
SYN2-205ENST00000620175 LYPD2Q6UXB3 125 aa11.25□□□□□ -0.61
SYN2-205ENST00000620175 GAGE2DQ9UEU5 116 aa11.25□□□□□ -0.61
SYN2-205ENST00000620175 HLA-DRB4P13762 266 aa11.24□□□□□ -0.61
SYN2-205ENST00000620175 C12orf74Q32Q52 190 aa11.24□□□□□ -0.61
SYN2-205ENST00000620175 LGALS9BQ3B8N2 356 aa11.24□□□□□ -0.61
SYN2-205ENST00000620175 LGALS9CQ6DKI2 356 aa11.24□□□□□ -0.61
SYN2-205ENST00000620175 HLA-DRB4X5D2U9 266 aa11.24□□□□□ -0.61
SYN2-205ENST00000620175 FABP5P3A8MUU1 101 aa11.24□□□□□ -0.61
SYN2-205ENST00000620175 HAX1O00165 279 aa11.24□□□□□ -0.61
SYN2-205ENST00000620175 ZFAND6Q6FIF0 208 aa11.24□□□□□ -0.61
SYN2-205ENST00000620175 LINC00312Q9Y6C7 94 aa11.24□□□□□ -0.61
SYN2-205ENST00000620175 A0A0U1RRA0 63 aa11.24□□□□□ -0.61
SYN2-205ENST00000620175 A8MWV9 139 aa11.24□□□□□ -0.61
SYN2-205ENST00000620175 PRRG2O14669 202 aa11.24□□□□□ -0.61
SYN2-205ENST00000620175 MFAP4P55083 255 aa11.24□□□□□ -0.61
SYN2-205ENST00000620175 CHTOPQ9Y3Y2 248 aaKnown RBP11.24□□□□□ -0.61
SYN2-205ENST00000620175 IGKV2D-26A0A0A0MRZ7 120 aa11.23□□□□□ -0.61
SYN2-205ENST00000620175 Q6AWC8 147 aa11.23□□□□□ -0.61
SYN2-205ENST00000620175 MRAP2Q96G30 205 aa11.23□□□□□ -0.61
SYN2-205ENST00000620175 TRAV2A0A0B4J234 112 aa11.23□□□□□ -0.61
SYN2-205ENST00000620175 PRSS46E5RG02 174 aa11.23□□□□□ -0.61
SYN2-205ENST00000620175 TMEM155Q4W5P6 130 aa11.23□□□□□ -0.61
SYN2-205ENST00000620175 NEGR1Q7Z3B1 354 aa11.23□□□□□ -0.61
SYN2-205ENST00000620175 RNF182Q8N6D2 247 aa11.23□□□□□ -0.61
SYN2-205ENST00000620175 TMEM167AQ8TBQ9 72 aa11.23□□□□□ -0.61
SYN2-205ENST00000620175 C16orf92Q96LL3 132 aa11.23□□□□□ -0.61
SYN2-205ENST00000620175 NXT2Q9NPJ8 142 aaKnown RBP11.23□□□□□ -0.61
SYN2-205ENST00000620175 ZNF256Q9Y2P7 627 aaPredicted RBP11.23□□□□□ -0.61
SYN2-205ENST00000620175 TRAV12-3A0A0B4J271 114 aa11.22□□□□□ -0.61
SYN2-205ENST00000620175 CEND1Q8N111 149 aa11.22□□□□□ -0.61
SYN2-205ENST00000620175 DLX4Q92988 240 aaPredicted RBP11.22□□□□□ -0.61
SYN2-205ENST00000620175 IGLL5B9A064 214 aa11.22□□□□□ -0.61
SYN2-205ENST00000620175 C9JAW5 83 aa11.22□□□□□ -0.61
SYN2-205ENST00000620175 F8W1H4 67 aa11.22□□□□□ -0.61
SYN2-205ENST00000620175 BOD1L2Q8IYS8 172 aa11.22□□□□□ -0.61
SYN2-205ENST00000620175 GAFA1Q96PS6 74 aa11.22□□□□□ -0.61
SYN2-205ENST00000620175 RPS20P60866 119 aaKnown RBP11.22□□□□□ -0.61
SYN2-205ENST00000620175 SMIM20Q8N5G0 67 aa11.21□□□□□ -0.61
SYN2-205ENST00000620175 LINC00527Q9UJ94 153 aa11.21□□□□□ -0.61
SYN2-205ENST00000620175 A0A1B0GXF2 115 aa11.21□□□□□ -0.61
SYN2-205ENST00000620175 PRSS29PA6NIE9 313 aa11.21□□□□□ -0.61
SYN2-205ENST00000620175 TMEM95Q3KNT9 176 aa11.21□□□□□ -0.61
SYN2-205ENST00000620175 REV3LO60673 3130 aa11.21□□□□□ -0.62
SYN2-205ENST00000620175 A0A1B0GW15 77 aa11.21□□□□□ -0.62
SYN2-205ENST00000620175 ASCL5Q7RTU5 278 aa11.21□□□□□ -0.62
SYN2-205ENST00000620175 SLC25A16P16260 332 aa11.2□□□□□ -0.62
SYN2-205ENST00000620175 LGALS3P17931 250 aaKnown RBP11.2□□□□□ -0.62
SYN2-205ENST00000620175 TRGV9Q99603 122 aa11.2□□□□□ -0.62
SYN2-205ENST00000620175 C21orf62Q9NYP8 219 aa11.2□□□□□ -0.62
SYN2-205ENST00000620175 SPTBN5Q9NRC6 3674 aaKnown RBP11.2□□□□□ -0.62
SYN2-205ENST00000620175 LY6HO94772 140 aa11.2□□□□□ -0.62
SYN2-205ENST00000620175 GFRA4Q9GZZ7 299 aa11.2□□□□□ -0.62
SYN2-205ENST00000620175 ZNF492Q9P255 531 aa11.2□□□□□ -0.62
SYN2-205ENST00000620175 FGF6P10767 208 aa11.2□□□□□ -0.62
SYN2-205ENST00000620175 FOXI2Q6ZQN5 318 aa11.2□□□□□ -0.62
SYN2-205ENST00000620175 KLHL30-AS1Q8NEE0 82 aa11.2□□□□□ -0.62
SYN2-205ENST00000620175 TIMM23O14925 209 aa11.19□□□□□ -0.62
SYN2-205ENST00000620175 CCDC144NLQ6NUI1 221 aa11.19□□□□□ -0.62
SYN2-205ENST00000620175 C14orf178Q8N769 122 aaPredicted RBP11.19□□□□□ -0.62
SYN2-205ENST00000620175 TLN2Q9Y4G6 2542 aa11.19□□□□□ -0.62
SYN2-205ENST00000620175 MAP1AP78559 2803 aaPredicted RBP11.19□□□□□ -0.62
SYN2-205ENST00000620175 IGKV3D-20A0A0C4DH25 116 aa11.19□□□□□ -0.62
SYN2-205ENST00000620175 FNDC10F2Z333 226 aa11.19□□□□□ -0.62
SYN2-205ENST00000620175 C16orf97H3BN30 126 aa11.19□□□□□ -0.62
SYN2-205ENST00000620175 LAGE3Q14657 143 aa11.19□□□□□ -0.62
SYN2-205ENST00000620175 CPAMD8Q8IZJ3 1885 aa11.19□□□□□ -0.62
SYN2-205ENST00000620175 CFAP47Q6ZTR5 3102 aa11.19□□□□□ -0.62
SYN2-205ENST00000620175 TRBV19A0A075B6N1 114 aa11.19□□□□□ -0.62
SYN2-205ENST00000620175 EGR2P11161 476 aaPredicted RBP11.19□□□□□ -0.62
SYN2-205ENST00000620175 CT83Q5H943 113 aa11.19□□□□□ -0.62
SYN2-205ENST00000620175 DDB2Q92466 427 aa11.19□□□□□ -0.62
SYN2-205ENST00000620175 ZNF48Q96MX3 618 aaPredicted RBP11.19□□□□□ -0.62
SYN2-205ENST00000620175 TET2Q6N021 2002 aaPredicted RBP11.19□□□□□ -0.62
SYN2-205ENST00000620175 FAM90A27PA6NNH2 459 aa11.18□□□□□ -0.62
SYN2-205ENST00000620175 TM4SF5O14894 197 aa11.18□□□□□ -0.62
SYN2-205ENST00000620175 NDPQ00604 133 aa11.18□□□□□ -0.62
SYN2-205ENST00000620175 NTN3O00634 580 aaPredicted RBP11.18□□□□□ -0.62
SYN2-205ENST00000620175 SS18L1O75177 396 aaPredicted RBP11.18□□□□□ -0.62
SYN2-205ENST00000620175 MT-ATP8P03928 68 aa11.18□□□□□ -0.62
SYN2-205ENST00000620175 SRSF1Q07955 248 aaKnown RBP eCLIP11.18□□□□□ -0.62
SYN2-205ENST00000620175 ZNF562Q6V9R5 426 aa11.18□□□□□ -0.62
SYN2-205ENST00000620175 SIGLEC9Q9Y336 463 aa11.18□□□□□ -0.62
SYN2-205ENST00000620175 EPG5Q9HCE0 2579 aa11.18□□□□□ -0.62
SYN2-205ENST00000620175 ZNF883P0CG24 379 aa11.18□□□□□ -0.62
SYN2-205ENST00000620175 MSMPQ1L6U9 139 aa11.18□□□□□ -0.62
SYN2-205ENST00000620175 RNF183Q96D59 192 aa11.18□□□□□ -0.62
SYN2-205ENST00000620175 SRD5A1P18405 259 aa11.17□□□□□ -0.62
SYN2-205ENST00000620175 ZNF474Q6S9Z5 364 aaPredicted RBP11.17□□□□□ -0.62
SYN2-205ENST00000620175 IGHV3OR16-10A0A075B7F0 116 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms