RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 CAMPP49913 170 aa9.69□□□□□ -0.86
TNFAIP3-209ENST00000619035 LINC00310P59036 64 aa9.69□□□□□ -0.86
TNFAIP3-209ENST00000619035 HIST2H2BDQ6DRA6 164 aa9.69□□□□□ -0.86
TNFAIP3-209ENST00000619035 C8orf86Q6ZUL3 223 aa9.69□□□□□ -0.86
TNFAIP3-209ENST00000619035 TSKUQ8WUA8 353 aa9.69□□□□□ -0.86
TNFAIP3-209ENST00000619035 GLMPQ8WWB7 406 aa9.69□□□□□ -0.86
TNFAIP3-209ENST00000619035 SMIM12Q96EX1 92 aa9.69□□□□□ -0.86
TNFAIP3-209ENST00000619035 SSBP4Q9BWG4 385 aaPredicted RBP9.69□□□□□ -0.86
TNFAIP3-209ENST00000619035 GSN-AS1Q9NRJ2 163 aa9.69□□□□□ -0.86
TNFAIP3-209ENST00000619035 MTORP42345 2549 aa9.69□□□□□ -0.86
TNFAIP3-209ENST00000619035 OTOGQ6ZRI0 2925 aa9.69□□□□□ -0.86
TNFAIP3-209ENST00000619035 IGKV3-7A0A075B6H7 116 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 RNASE1P07998 156 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 CRISP2P16562 243 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 SLAQ13239 276 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 GPHB5Q86YW7 130 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 GBGT1Q8N5D6 347 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 DAZAP1Q96EP5 407 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 RHPN1-AS1Q9BWJ2 59 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 IGHV4OR15-8A0A075B7B6 117 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 A0A087WW49 117 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 IGHV7-4-1A0A0J9YVY3 117 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 A0A1W2PS18 150 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 LCN12Q6JVE5 192 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 C18orf65Q6ZTR6 163 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 WFDC12Q8WWY7 111 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 PGLYRP4Q96LB8 373 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 JMJD8Q96S16 334 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 SLC50A1Q9BRV3 221 aa9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 ANK3Q12955 4377 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-209ENST00000619035 K7EMT4 169 aa9.67□□□□□ -0.86
TNFAIP3-209ENST00000619035 SERF1AO75920 110 aa9.67□□□□□ -0.86
TNFAIP3-209ENST00000619035 CRIP1P50238 77 aa9.67□□□□□ -0.86
TNFAIP3-209ENST00000619035 DEFB136Q30KP8 78 aa9.67□□□□□ -0.86
TNFAIP3-209ENST00000619035 C16orf92Q96LL3 132 aa9.67□□□□□ -0.86
TNFAIP3-209ENST00000619035 SERTM2A0A1B0GWG4 89 aa9.67□□□□□ -0.86
TNFAIP3-209ENST00000619035 SYNJ2BPP57105 145 aa9.67□□□□□ -0.86
TNFAIP3-209ENST00000619035 WDR73Q6P4I2 378 aa9.67□□□□□ -0.86
TNFAIP3-209ENST00000619035 Q8TAT8 98 aa9.67□□□□□ -0.86
TNFAIP3-209ENST00000619035 VGLL1Q99990 258 aa9.67□□□□□ -0.86
TNFAIP3-209ENST00000619035 ZNF492Q9P255 531 aa9.67□□□□□ -0.86
TNFAIP3-209ENST00000619035 UFC1Q9Y3C8 167 aa9.67□□□□□ -0.86
TNFAIP3-209ENST00000619035 HIVEP2P31629 2446 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 TRAV8-2A0A0B4J237 113 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 PRAC2D3DTV9 90 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 CD33P20138 364 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 HILS1P60008 231 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 BAGE3Q86Y29 109 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 OR2D3Q8NGH3 330 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 CLEC5AQ9NY25 188 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 TRBV6-1A0A0K0K1D8 114 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 APCSP02743 223 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 SRIP30626 198 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 HOXD3P31249 432 aaPredicted RBP9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 C11orf44Q8N8P7 122 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 C16orf95Q9H693 158 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 SMPXQ9UHP9 88 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 ZFP30Q9Y2G7 519 aa9.66□□□□□ -0.86
TNFAIP3-209ENST00000619035 FBLL1A6NHQ2 334 aaKnown RBP9.65□□□□□ -0.86
TNFAIP3-209ENST00000619035 A8MWL6 223 aa9.65□□□□□ -0.86
TNFAIP3-209ENST00000619035 ERCC8Q13216 396 aa9.65□□□□□ -0.86
TNFAIP3-209ENST00000619035 TCTEX1D4Q5JR98 221 aa9.65□□□□□ -0.86
TNFAIP3-209ENST00000619035 TMEM18Q96B42 140 aa9.65□□□□□ -0.86
TNFAIP3-209ENST00000619035 RCHY1Q96PM5 261 aa9.65□□□□□ -0.86
TNFAIP3-209ENST00000619035 HLA-DQA1P01909 254 aa9.65□□□□□ -0.87
TNFAIP3-209ENST00000619035 MT-ND6P03923 174 aa9.65□□□□□ -0.87
TNFAIP3-209ENST00000619035 BMI1P35226 326 aa9.65□□□□□ -0.87
TNFAIP3-209ENST00000619035 IQCJQ1A5X6 159 aa9.65□□□□□ -0.87
TNFAIP3-209ENST00000619035 DUX3Q96PT4 197 aa9.65□□□□□ -0.87
TNFAIP3-209ENST00000619035 NF1P21359 2839 aa9.64□□□□□ -0.87
TNFAIP3-209ENST00000619035 TMSB15BA0A087X1C1 80 aa9.64□□□□□ -0.87
TNFAIP3-209ENST00000619035 TMEM213A2RRL7 107 aa9.64□□□□□ -0.87
TNFAIP3-209ENST00000619035 LINC00587B1AMM8 73 aa9.64□□□□□ -0.87
TNFAIP3-209ENST00000619035 NPIPB6E9PJ23 425 aa9.64□□□□□ -0.87
TNFAIP3-209ENST00000619035 SSTP61278 116 aa9.64□□□□□ -0.87
TNFAIP3-209ENST00000619035 KLHL30-AS1Q8NEE0 82 aa9.64□□□□□ -0.87
TNFAIP3-209ENST00000619035 NRN1Q9NPD7 142 aa9.64□□□□□ -0.87
TNFAIP3-209ENST00000619035 A0A1B0GXF2 115 aa9.63□□□□□ -0.87
TNFAIP3-209ENST00000619035 LGALS9O00182 355 aa9.63□□□□□ -0.87
TNFAIP3-209ENST00000619035 CT45A10P0DMU9 189 aa9.63□□□□□ -0.87
TNFAIP3-209ENST00000619035 SLURP1P55000 103 aa9.63□□□□□ -0.87
TNFAIP3-209ENST00000619035 HAX1O00165 279 aa9.63□□□□□ -0.87
TNFAIP3-209ENST00000619035 JOSD1Q15040 202 aaPredicted RBP9.63□□□□□ -0.87
TNFAIP3-209ENST00000619035 REC114Q7Z4M0 266 aa9.63□□□□□ -0.87
TNFAIP3-209ENST00000619035 ZNF738Q8NE65 137 aa9.63□□□□□ -0.87
TNFAIP3-209ENST00000619035 OR11H1Q8NG94 326 aa9.63□□□□□ -0.87
TNFAIP3-209ENST00000619035 WIPF2Q8TF74 440 aaPredicted RBP9.63□□□□□ -0.87
TNFAIP3-209ENST00000619035 C20orf173Q96LM9 149 aa9.63□□□□□ -0.87
TNFAIP3-209ENST00000619035 TPPP3Q9BW30 176 aa9.63□□□□□ -0.87
TNFAIP3-209ENST00000619035 A0A1W2PRX2 142 aa9.62□□□□□ -0.87
TNFAIP3-209ENST00000619035 INAFM1C9JVW0 142 aa9.62□□□□□ -0.87
TNFAIP3-209ENST00000619035 CT83Q5H943 113 aa9.62□□□□□ -0.87
TNFAIP3-209ENST00000619035 WFDC3Q8IUB2 231 aa9.62□□□□□ -0.87
TNFAIP3-209ENST00000619035 C4orf3Q8WVX3 66 aa9.62□□□□□ -0.87
TNFAIP3-209ENST00000619035 MRPL53Q96EL3 112 aaKnown RBP9.62□□□□□ -0.87
TNFAIP3-209ENST00000619035 PRR25Q96S07 402 aa9.62□□□□□ -0.87
TNFAIP3-209ENST00000619035 A8MWP6 167 aa9.62□□□□□ -0.87
TNFAIP3-209ENST00000619035 NDUFA7O95182 113 aa9.62□□□□□ -0.87
TNFAIP3-209ENST00000619035 ZNF705DP0CH99 300 aaPredicted RBP9.62□□□□□ -0.87
TNFAIP3-209ENST00000619035 ZNF705BP0CI00 300 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms