RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 SLURP1P55000 103 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 SRSF2Q01130 221 aaKnown RBP8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 FOXL1Q12952 345 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 Q8NFD4 153 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 IGLC7A0M8Q6 106 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 IFI27P40305 119 aaPredicted RBP8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 CDX1P47902 265 aaPredicted RBP8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 CDSNQ15517 529 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 DNLZQ5SXM8 178 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 C1orf159Q96HA4 380 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 ANAPC10Q9UM13 185 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 IGHV7-81A0A0B4J1V7 117 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 F5H768 121 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 Q8N7P7 452 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 SPOCK3Q9BQ16 436 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 C1QTNF4Q9BXJ3 329 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 D6R8Y8 96 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 J3QR89 54 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 SPRY2O43597 315 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 CD28P10747 220 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 YPEL3P61236 119 aaPredicted RBP8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 CIRBPQ14011 172 aaKnown RBP8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 SLC25A34Q6PIV7 304 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 SRSF8Q9BRL6 282 aaKnown RBP8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 TANC2Q9HCD6 1990 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 ATP5LO75964 103 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 MALP21145 153 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 SFTA2Q6UW10 78 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 OR11H6Q8NGC7 330 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 C17orf77Q96MU5 243 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 C2orf88Q9BSF0 95 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 CCL24O00175 119 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 CRPP02741 224 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 CD5P06127 495 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 ELANEP08246 267 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 CXCL1P09341 107 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 UTF1Q5T230 341 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 AMN1Q8IY45 258 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE12BA1L429 117 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 C9JQL5 133 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE7O76087 117 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE12FP0CL80 117 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE12GP0CL81 117 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE12IP0CL82 117 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 CEP192Q8TEP8 1941 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 CFAP47Q6ZTR5 3102 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 A6NDN8 102 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 RPL36AP83881 106 aaKnown RBP8□□□□□ -1.13
SMARCA1-205ENST00000617310 TMEM75Q8N9X5 138 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 RPL36ALQ969Q0 106 aaKnown RBP8□□□□□ -1.13
SMARCA1-205ENST00000617310 CYSLTR1Q9Y271 337 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 A0A096LPF7 62 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 TRAV1-1A0A0B4J248 108 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 C8orf49Q96NF6 230 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 GGTLC3B5MD39 225 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 Q86TA4 180 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 DSCAML1Q8TD84 2053 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 ANKRD17O75179 2603 aaKnown RBP7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 TRBV19A0A075B6N1 114 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 F2Z2F3 143 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 CMC4P56277 68 aaPredicted RBP7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 CACNG7P62955 275 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST2H2BDQ6DRA6 164 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 NDUFA4O00483 81 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 PRADC1Q9BSG0 188 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 CD300EQ496F6 205 aaPredicted RBP7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 CFAP161Q6P656 301 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 ZNF491Q8N8L2 437 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 NUP35Q8NFH5 326 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 MCRIP2Q9BUT9 160 aaKnown RBP7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 A0A087WWC5 75 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 TMEM213A2RRL7 107 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 APOMO95445 188 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 LINC00614P0C842 121 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 LMO4P61968 165 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 APRG1Q8IVJ8 170 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 TRAV13-1A0A0B4J241 112 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE12JA6NER3 117 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 ADARB2-AS1A8MUL3 147 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 HOXA5P20719 270 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE1Q13065 139 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE4Q13068 117 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE5Q13069 117 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 KRTAP27-1Q3LI81 207 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE13Q4V321 117 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 LYRM7Q5U5X0 104 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 Q8N9W7 124 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 AJUBAQ96IF1 538 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 A0A1B0GW15 77 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 CIDEAO60543 219 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 PKIAP61925 76 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 LINC00469Q8N7U9 141 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 IGLV2-23P01705 113 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 VGLL1Q99990 258 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BKO60814 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 IGLV1-47P01700 117 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BJP06899 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BOP23527 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BBP33778 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BDP58876 126 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms