RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 SHANK3Q9BYB0 1731 aa4.83□□□□□ -1.64
RFX3-212ENST00000617270 IGHV1-24A0A0C4DH33 117 aa4.83□□□□□ -1.64
RFX3-212ENST00000617270 BAALC-AS2P0C853 105 aa4.83□□□□□ -1.64
RFX3-212ENST00000617270 SMIM20Q8N5G0 67 aa4.83□□□□□ -1.64
RFX3-212ENST00000617270 WIPF3A6NGB9 483 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 E9PQ18 207 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 UBE2E1P51965 193 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 TEX36Q5VZQ5 186 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.82□□□□□ -1.64
RFX3-212ENST00000617270 SPTSSBQ8NFR3 76 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 IGFBPL1Q8WX77 278 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 C20orf144Q9BQM9 153 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 Q9H8V8 135 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 A0A0G2JNJ9 132 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 BVES-AS1Q5T3Y7 98 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 Q9UFV3 132 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 WNK2Q9Y3S1 2297 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 MTCL1Q9Y4B5 1905 aaKnown RBP4.82□□□□□ -1.64
RFX3-212ENST00000617270 CHD5Q8TDI0 1954 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 MRPL23Q16540 153 aaKnown RBP4.82□□□□□ -1.64
RFX3-212ENST00000617270 TRAV4A0A0B4J268 109 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 IGKV3D-7A0A0C4DH55 119 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 ZNF492Q9P255 531 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 ACACAQ13085 2346 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 ITGB4P16144 1822 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 IGLV10-54A0A075B6I4 117 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 SEC61GP60059 68 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 Q0VG73 95 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 LHFPL1Q86WI0 220 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 KIAA1217Q5T5P2 1943 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 NPYP01303 97 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 GGNQ86UU5 652 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 SIGLEC8Q9NYZ4 499 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 NBASA2RRP1 2371 aa4.82□□□□□ -1.64
RFX3-212ENST00000617270 TRBV19A0A075B6N1 114 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.81□□□□□ -1.64
RFX3-212ENST00000617270 IGKV2-29A2NJV5 120 aaPredicted RBP4.81□□□□□ -1.64
RFX3-212ENST00000617270 WIPF2Q8TF74 440 aaPredicted RBP4.81□□□□□ -1.64
RFX3-212ENST00000617270 ANKRD36A6QL64 1941 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 TDRD15B5MCY1 1934 aaKnown RBP4.81□□□□□ -1.64
RFX3-212ENST00000617270 NDUFB8O95169 186 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 COX8AP10176 69 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 Q6ZWC4 215 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 TMEM105Q8N8V8 129 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 DOCK5Q9H7D0 1870 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 IGLV3-32A0A0A0MS00 114 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 C5orf63A6NC05 138 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 COX7B2Q8TF08 81 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 ZNF503Q96F45 646 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 NOP10Q9NPE3 64 aaKnown RBP4.81□□□□□ -1.64
RFX3-212ENST00000617270 LRRK1Q38SD2 2015 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 FER1L5A0AVI2 2057 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 CCL25O15444 150 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 A0A0G2JRQ6 117 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 VSIG2Q96IQ7 327 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 REG4Q9BYZ8 158 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 PKDREJQ9NTG1 2253 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 MSMBP08118 114 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 KIAA2026Q5HYC2 2103 aa4.81□□□□□ -1.64
RFX3-212ENST00000617270 PROP1O75360 226 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 IGLL1P15814 213 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 ADCYAP1P18509 176 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 FOXE3Q13461 319 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 DOCK7Q96N67 2140 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 KLF2Q9Y5W3 355 aaPredicted RBP4.8□□□□□ -1.64
RFX3-212ENST00000617270 PLCE1Q9P212 2302 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 CAMK2N2Q96S95 79 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 ZMAT4Q9H898 229 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 GLI3P10071 1580 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 WDR86Q86TI4 376 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 MUSTN1Q8IVN3 82 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 DYNAPQ8N1N2 210 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 FREM3P0C091 2139 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 RNF144BQ7Z419 303 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 SLC25A29Q8N8R3 303 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 DKK2Q9UBU2 259 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 IGLV3-12A0A075B6K2 115 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 F8VRH5 84 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 CFPP27918 469 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 ARTNQ5T4W7 220 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 ABCA7Q8IZY2 2146 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 BUB3O43684 328 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 CFC1BP0CG36 223 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 CFC1P0CG37 223 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 PSMB8P28062 276 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 UBE2AP49459 152 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 ZNF134P52741 427 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 ZFP2Q6ZN57 461 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 RNF183Q96D59 192 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 Q96MF0 132 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 J3KT08 172 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 Q6P435 159 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 Q6ZRM9 215 aa4.8□□□□□ -1.64
RFX3-212ENST00000617270 LYPD3O95274 346 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 CSRP1P21291 193 aaKnown RBP4.79□□□□□ -1.64
RFX3-212ENST00000617270 NREPQ16612 68 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 ZC2HC1AQ96GY0 325 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 IGHV3-30P01768 117 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 IGHV3-33P01772 117 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms